Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02792
(848 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9Z2N8|ACL6A_MOUSE Actin-like protein 6A (53 kDa BRG1-as... 287 3e-77
sp|O96019|ACL6A_HUMAN Actin-like protein 6A (53 kDa BRG1-as... 286 4e-77
sp|Q99MR0|ACL6B_MOUSE Actin-like protein 6B (53 kDa BRG1-as... 283 6e-76
sp|O94805|ACL6B_HUMAN Actin-like protein 6B (53 kDa BRG1-as... 283 6e-76
sp|Q09849|YAE9_SCHPO Hypothetical protein C23D3.09 in chrom... 145 1e-34
sp|O65314|ACT_SCHDU Actin 134 4e-31
sp|P53476|ACT_TOXGO Actin 132 9e-31
sp|O16808|ACT_MAYDE Actin 132 9e-31
sp|P10984|ACT2_CAEEL Actin-2 132 1e-30
sp|P53500|ACT_CYAME Actin 132 1e-30
>sp|Q9Z2N8|ACL6A_MOUSE Actin-like protein 6A (53 kDa BRG1-associated factor A)
(Actin-related protein Baf53a)
Length = 429
Score = 287 bits (734), Expect = 3e-77
Identities = 137/296 (46%), Positives = 194/296 (65%), Gaps = 14/296 (4%)
Frame = +1
Query: 1 ALVFDFGSYSLRGGFAGEDLPKLDIPSVAGVIELLDEAKSKRFVVG-------------- 138
ALVFD GSY++R G+AGED PK+D P+ GV+ D+ + + G
Sbjct: 13 ALVFDIGSYTVRAGYAGEDCPKVDFPTAIGVVLERDDGSTMMEIDGDKGKQGGPTYYIDT 72
Query: 139 NNITYPVQGKELLPLMKDCMIDDWDLFEKVVEHMLKNLTPYETTCHPILFSEPAWNTKAK 318
N + P + E + +K+ M++DWD F+ +++H K E + HP+L SE WNT+AK
Sbjct: 73 NALRVpreNMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAK 132
Query: 319 REKLAEILFEKFDVPAAFVAKNAVLSCFSNGRATGLVIDSGATYTSTVPVYDGHVLTQGI 498
REKL E++FE + +PA F+ K AVL+ F+NGR+TGL++DSGAT+T+ +PV+DG+VL QGI
Sbjct: 133 REKLTELMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGI 192
Query: 499 MRSPLAGDFIVRQTQKYLESQKIEPVPIYKVASKEFVKSGEKPRWTVKPNLPQVTDSYHR 678
++SPLAGDFI Q ++ + IE +P Y +ASKE V+ G W K LPQVT S+H
Sbjct: 193 VKSPLAGDFITMQCRELFQEMNIELIPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHN 252
Query: 679 YMVKTLMQDFAATVYQVADDKYNETQADNLPTVSFDFPNGYSVDVGHERFQIPEAL 846
YM ++QDF A+V QV+D Y+E A +PTV ++FPNGY+ D G ER +IPE L
Sbjct: 253 YMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGL 308
>sp|O96019|ACL6A_HUMAN Actin-like protein 6A (53 kDa BRG1-associated factor A)
(Actin-related protein Baf53a) (ArpNbeta)
Length = 429
Score = 286 bits (733), Expect = 4e-77
Identities = 137/296 (46%), Positives = 195/296 (65%), Gaps = 14/296 (4%)
Frame = +1
Query: 1 ALVFDFGSYSLRGGFAGEDLPKLDIPSVAGVIELLDEAKSKRFVVG-------------- 138
ALVFD GSY++R G+AGED PK+D P+ G++ D+ + + G
Sbjct: 13 ALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDKGKQGGPTYYIDT 72
Query: 139 NNITYPVQGKELLPLMKDCMIDDWDLFEKVVEHMLKNLTPYETTCHPILFSEPAWNTKAK 318
N + P + E + +K+ M++DWD F+ +++H K E + HP+L SE WNT+AK
Sbjct: 73 NALRVpreNMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAK 132
Query: 319 REKLAEILFEKFDVPAAFVAKNAVLSCFSNGRATGLVIDSGATYTSTVPVYDGHVLTQGI 498
REKL E++FE +++PA F+ K AVL+ F+NGR+TGL++DSGAT+T+ +PV+DG+VL QGI
Sbjct: 133 REKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGI 192
Query: 499 MRSPLAGDFIVRQTQKYLESQKIEPVPIYKVASKEFVKSGEKPRWTVKPNLPQVTDSYHR 678
++SPLAGDFI Q ++ + IE VP Y +ASKE V+ G W K LPQVT S+H
Sbjct: 193 VKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHN 252
Query: 679 YMVKTLMQDFAATVYQVADDKYNETQADNLPTVSFDFPNGYSVDVGHERFQIPEAL 846
YM ++QDF A+V QV+D Y+E A +PTV ++FPNGY+ D G ER +IPE L
Sbjct: 253 YMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGL 308
>sp|Q99MR0|ACL6B_MOUSE Actin-like protein 6B (53 kDa BRG1-associated factor B)
(Actin-related protein Baf53b)
Length = 426
Score = 283 bits (723), Expect = 6e-76
Identities = 136/293 (46%), Positives = 194/293 (66%), Gaps = 11/293 (3%)
Frame = +1
Query: 1 ALVFDFGSYSLRGGFAGEDLPKLDIPSVAGVIELLD----------EAKSKRFVVGNNIT 150
ALVFD GS+S+R G+AGED PK D P+ G++ + E K K F + N
Sbjct: 13 ALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNAL 72
Query: 151 Y-PVQGKELLPLMKDCMIDDWDLFEKVVEHMLKNLTPYETTCHPILFSEPAWNTKAKREK 327
+ P G E++ +K+ MI+DW+ F +++H E HP+L SE WNT+AKREK
Sbjct: 73 HVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREK 132
Query: 328 LAEILFEKFDVPAAFVAKNAVLSCFSNGRATGLVIDSGATYTSTVPVYDGHVLTQGIMRS 507
L E++FE++++PA F+ K AVL+ F+NGR+TGLV+DSGAT+T+ +PV+DG+VL QGI++S
Sbjct: 133 LTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKS 192
Query: 508 PLAGDFIVRQTQKYLESQKIEPVPIYKVASKEFVKSGEKPRWTVKPNLPQVTDSYHRYMV 687
PLAGDFI Q ++ + I+ +P Y +A+KE V+ G P W K LPQV+ S+H YM
Sbjct: 193 PLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMC 252
Query: 688 KTLMQDFAATVYQVADDKYNETQADNLPTVSFDFPNGYSVDVGHERFQIPEAL 846
++QDF A+V QV+D Y+E A +PTV ++ PNGY+ D G ER +IPE L
Sbjct: 253 NEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGL 305
>sp|O94805|ACL6B_HUMAN Actin-like protein 6B (53 kDa BRG1-associated factor B)
(Actin-related protein Baf53b) (ArpNalpha)
Length = 426
Score = 283 bits (723), Expect = 6e-76
Identities = 136/293 (46%), Positives = 194/293 (66%), Gaps = 11/293 (3%)
Frame = +1
Query: 1 ALVFDFGSYSLRGGFAGEDLPKLDIPSVAGVIELLD----------EAKSKRFVVGNNIT 150
ALVFD GS+S+R G+AGED PK D P+ G++ + E K K F + N
Sbjct: 13 ALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEKKGKIFHIDTNAL 72
Query: 151 Y-PVQGKELLPLMKDCMIDDWDLFEKVVEHMLKNLTPYETTCHPILFSEPAWNTKAKREK 327
+ P G E++ +K+ MI+DW+ F +++H E HP+L SE WNT+AKREK
Sbjct: 73 HVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREK 132
Query: 328 LAEILFEKFDVPAAFVAKNAVLSCFSNGRATGLVIDSGATYTSTVPVYDGHVLTQGIMRS 507
L E++FE++++PA F+ K AVL+ F+NGR+TGLV+DSGAT+T+ +PV+DG+VL QGI++S
Sbjct: 133 LTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKS 192
Query: 508 PLAGDFIVRQTQKYLESQKIEPVPIYKVASKEFVKSGEKPRWTVKPNLPQVTDSYHRYMV 687
PLAGDFI Q ++ + I+ +P Y +A+KE V+ G P W K LPQV+ S+H YM
Sbjct: 193 PLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMC 252
Query: 688 KTLMQDFAATVYQVADDKYNETQADNLPTVSFDFPNGYSVDVGHERFQIPEAL 846
++QDF A+V QV+D Y+E A +PTV ++ PNGY+ D G ER +IPE L
Sbjct: 253 NEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGL 305
>sp|Q09849|YAE9_SCHPO Hypothetical protein C23D3.09 in chromosome I
Length = 430
Score = 145 bits (367), Expect = 1e-34
Identities = 91/294 (30%), Positives = 151/294 (51%), Gaps = 12/294 (4%)
Frame = +1
Query: 1 ALVFDFGSYSLRGGFAGEDLPKLDIPSVAGVIELLDEAKSKRFVVGN-NITYPVQGKELL 177
+LV D GS R G+AGE+ P +PS GV D ++VV I P+ G E+
Sbjct: 12 SLVIDPGSCWTRFGYAGEESPMTILPSYYGVRS--DVTGRNKYVVDELQIHAPIPGMEVK 69
Query: 178 PLMKDCMIDDWDLFEKVVEHMLKNLTPYETTCHPILFSEPAWNTKAKREKLAEILFEKFD 357
+ +I DW+ E LK T + ++ +EP+WN ++ R+++ E FE+
Sbjct: 70 NGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLH 129
Query: 358 VPAAFVAKNAVLSCFSNGRATGLVIDSGATYTSTVPVYDGHVLTQGIMRSPLAGDFIVRQ 537
VPA ++ K AV F+N ++T L++D G+ S PV DG ++ +GI + LAGDF+
Sbjct: 130 VPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSLAGDFLNAN 189
Query: 538 TQKYLESQKIEPVPIYKVASKEFV--KSGE---------KPRWTVKPNLPQVTDSYHRYM 684
++ + IE P Y++A K +SG KP + P + +T SY +
Sbjct: 190 IEQLFNTMNIEFPPHYRIARKSVAIQQSGNMANGSADAVKPA-VLYPPIQDLTSSYEIFQ 248
Query: 685 VKTLMQDFAATVYQVADDKYNETQADNLPTVSFDFPNGYSVDVGHERFQIPEAL 846
+ +++++ +V V D ++E +A + F+FP+G + G ERF+I E L
Sbjct: 249 KRRVIEEWKESVLDVLDTPFDEAKASSRNPKPFEFPDGVTHKFGQERFRISEIL 302
>sp|O65314|ACT_SCHDU Actin
Length = 378
Score = 134 bits (336), Expect = 4e-31
Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 14/296 (4%)
Frame = +1
Query: 1 ALVFDFGSYSLRGGFAGEDLPKLDIPSVAGVIE--------------LLDEAKSKRFVVG 138
ALV D GS ++ GFAG+D P+ PS+ G + DEA+SKR ++
Sbjct: 10 ALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQSKRGIL- 68
Query: 139 NNITYPVQGKELLPLMKDCMIDDWDLFEKVVEHMLKNLTPYETTCHPILFSEPAWNTKAK 318
+ YP++ ++ +WD EK+ H N HP+L +E N KA
Sbjct: 69 -TLKYPIEHG---------VVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 118
Query: 319 REKLAEILFEKFDVPAAFVAKNAVLSCFSNGRATGLVIDSGATYTSTVPVYDGHVLTQGI 498
REK+ +I+FE F+VPA +VA AVLS +++GR TG+V+DSG + TVP+Y+G+ L I
Sbjct: 119 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 178
Query: 499 MRSPLAGDFIVRQTQKYLESQKIEPVPIYKVASKEFVKSGEKPRWTVKPNLPQVTDSYHR 678
MR LAG + L + A +E V+ +K L V Y +
Sbjct: 179 MRLDLAGRDLTDNLMTILMERGYN---FTTTAEREIVRD-------IKEKLCYVALDYEQ 228
Query: 679 YMVKTLMQDFAATVYQVADDKYNETQADNLPTVSFDFPNGYSVDVGHERFQIPEAL 846
M +L T + N +++ P+G + VG+ERF+ PE L
Sbjct: 229 EMANSL------------------TSSQN--EKNYELPDGQQITVGNERFRCPEVL 264
>sp|P53476|ACT_TOXGO Actin
Length = 376
Score = 132 bits (333), Expect = 9e-31
Identities = 94/296 (31%), Positives = 144/296 (48%), Gaps = 14/296 (4%)
Frame = +1
Query: 1 ALVFDFGSYSLRGGFAGEDLPKLDIPSVAGVIE--------------LLDEAKSKRFVVG 138
ALV D GS +++ G AG+D P+ PS+ G + + DEA+SKR ++
Sbjct: 8 ALVVDNGSGNVKAGVAGDDAPRAVFPSIVGKPKNPGIMVGMEEKDCYVGDEAQSKRGIL- 66
Query: 139 NNITYPVQGKELLPLMKDCMIDDWDLFEKVVEHMLKNLTPYETTCHPILFSEPAWNTKAK 318
+ YP++ ++ +WD EK+ H N HP+L +E N KA
Sbjct: 67 -TLKYPIEHG---------IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 319 REKLAEILFEKFDVPAAFVAKNAVLSCFSNGRATGLVIDSGATYTSTVPVYDGHVLTQGI 498
RE++ +I+FE F+VPA +VA AVLS +S+GR TG+V+DSG + TVP+Y+G+ L I
Sbjct: 117 RERMTQIMFETFNVPAMYVAIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 176
Query: 499 MRSPLAGDFIVRQTQKYLESQKIEPVPIYKVASKEFVKSGEKPRWTVKPNLPQVTDSYHR 678
MR LAG + K L + A KE V+ +K L + +
Sbjct: 177 MRLDLAGRDLTEYMMKILHER---GYGFTTSAEKEIVRD-------IKEKLCYIALDFDE 226
Query: 679 YMVKTLMQDFAATVYQVADDKYNETQADNLPTVSFDFPNGYSVDVGHERFQIPEAL 846
M + A+D + + S++ P+G + VG+ERF+ PEAL
Sbjct: 227 EM-------------KAAEDSSDIEK-------SYELPDGNIITVGNERFRCPEAL 262
>sp|O16808|ACT_MAYDE Actin
Length = 376
Score = 132 bits (333), Expect = 9e-31
Identities = 93/296 (31%), Positives = 140/296 (47%), Gaps = 14/296 (4%)
Frame = +1
Query: 1 ALVFDFGSYSLRGGFAGEDLPKLDIPSVAGVIE--------------LLDEAKSKRFVVG 138
ALV D GS + GFAG+D P+ PS+ G + DEA+SKR ++
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL- 66
Query: 139 NNITYPVQGKELLPLMKDCMIDDWDLFEKVVEHMLKNLTPYETTCHPILFSEPAWNTKAK 318
+ YP++ +I +WD EK+ H N HP+L +E N KA
Sbjct: 67 -TLKYPIEHG---------IITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 319 REKLAEILFEKFDVPAAFVAKNAVLSCFSNGRATGLVIDSGATYTSTVPVYDGHVLTQGI 498
REK+ +I+FE F+ PA +VA AVLS +++GR TG+V+DSG T TVP+Y+G+ L I
Sbjct: 117 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 499 MRSPLAGDFIVRQTQKYLESQKIEPVPIYKVASKEFVKSGEKPRWTVKPNLPQVTDSYHR 678
+R LAG + K L + A +E V+ +K L
Sbjct: 177 LRLDLAGRDLTDYLMKILTERGYS---FTTTAEREIVRD-------IKEKL--------S 218
Query: 679 YMVKTLMQDFAATVYQVADDKYNETQADNLPTVSFDFPNGYSVDVGHERFQIPEAL 846
Y+ Q+ A + +K S++ P+G + +G+ERF+ PE+L
Sbjct: 219 YVALDFEQEMATAAASTSLEK------------SYELPDGQVITIGNERFRCPESL 262
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 132 bits (332), Expect = 1e-30
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 14/296 (4%)
Frame = +1
Query: 1 ALVFDFGSYSLRGGFAGEDLPKLDIPSVAGVIE--------------LLDEAKSKRFVVG 138
ALV D GS + GFAG+D P+ PS+ G + DEA+SKR ++
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL- 66
Query: 139 NNITYPVQGKELLPLMKDCMIDDWDLFEKVVEHMLKNLTPYETTCHPILFSEPAWNTKAK 318
+ YP++ ++ +WD EK+ H N HP+L +E N KA
Sbjct: 67 -TLKYPIEHG---------IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 319 REKLAEILFEKFDVPAAFVAKNAVLSCFSNGRATGLVIDSGATYTSTVPVYDGHVLTQGI 498
REK+ +I+FE F+ PA +VA AVLS +++GR TG+V+DSG T TVP+Y+G+ L I
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 499 MRSPLAGDFIVRQTQKYLESQKIEPVPIYKVASKEFVKSGEKPRWTVKPNLPQVTDSYHR 678
+R LAG + K L + A +E V+ +K L
Sbjct: 177 LRLDLAGRDLTDYLMKILTERGYS---FTTTAEREIVRD-------IKEKL--------C 218
Query: 679 YMVKTLMQDFAATVYQVADDKYNETQADNLPTVSFDFPNGYSVDVGHERFQIPEAL 846
Y+ Q+ A + +K S++ P+G + VG+ERF+ PEAL
Sbjct: 219 YVALDFEQEMATAASSSSLEK------------SYELPDGQVITVGNERFRCPEAL 262
>sp|P53500|ACT_CYAME Actin
Length = 377
Score = 132 bits (332), Expect = 1e-30
Identities = 93/296 (31%), Positives = 140/296 (47%), Gaps = 14/296 (4%)
Frame = +1
Query: 1 ALVFDFGSYSLRGGFAGEDLPKLDIPSVAGVIE--------------LLDEAKSKRFVVG 138
ALV D GS ++ GFAG+D P+ PS+ G + DEA+SKR ++
Sbjct: 8 ALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQAVMVGMGQKDSYVGDEAQSKRGIL- 66
Query: 139 NNITYPVQGKELLPLMKDCMIDDWDLFEKVVEHMLKNLTPYETTCHPILFSEPAWNTKAK 318
++ YP++ ++ +WD EK+ H N HP+L +E N KA
Sbjct: 67 -SLKYPIEHG---------IVTNWDDMEKIWYHTFYNELRISPEDHPVLLTEAPLNPKAN 116
Query: 319 REKLAEILFEKFDVPAAFVAKNAVLSCFSNGRATGLVIDSGATYTSTVPVYDGHVLTQGI 498
REK+ +I+FE F+VPA +VA AVLS +++GR TG+V+DSG T TVP+Y+G+ L I
Sbjct: 117 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVVDSGDGVTHTVPIYEGYALPHAI 176
Query: 499 MRSPLAGDFIVRQTQKYLESQKIEPVPIYKVASKEFVKSGEKPRWTVKPNLPQVTDSYHR 678
MR LAG + K L + A +E V+ +K V Y
Sbjct: 177 MRIDLAGRDLTDYLAKILTERGYS---FTTTAEREIVRD-------IKEKCCYVAQDYDH 226
Query: 679 YMVKTLMQDFAATVYQVADDKYNETQADNLPTVSFDFPNGYSVDVGHERFQIPEAL 846
+ + A++ D +Y + P+G + +G ERF+ PE L
Sbjct: 227 EL------EIASSQPAKIDKQY-------------ELPDGQIITIGSERFRCPEVL 263
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,257,845
Number of Sequences: 369166
Number of extensions: 1825443
Number of successful extensions: 5906
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5385
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8341863645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)