Planaria EST Database


DrC_02701

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02701
         (639 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30415|NKTR_MOUSE  NK-tumor recognition protein (Natural-...   165   8e-41
sp|P30414|NKTR_HUMAN  NK-tumor recognition protein (Natural-...   163   3e-40
sp|Q9P3X9|PPID_NEUCR  41 kDa peptidyl-prolyl cis-trans isome...   163   4e-40
sp|O55035|PPIG_RAT  Peptidyl-prolyl cis-trans isomerase G (P...   163   4e-40
sp|Q13427|PPIG_HUMAN  Peptidyl-prolyl cis-trans isomerase G ...   162   5e-40
sp|P34790|CYP1_ARATH  Peptidyl-prolyl cis-trans isomerase (P...   160   3e-39
sp|P73789|PPI2_SYNY3  Peptidyl-prolyl cis-trans isomerase sl...   158   1e-38
sp|P52009|CYP1_CAEEL  Peptidyl-prolyl cis-trans isomerase 1 ...   158   1e-38
sp|P52010|CYP2_CAEEL  Peptidyl-prolyl cis-trans isomerase 2 ...   157   2e-38
sp|P52015|CYP7_CAEEL  Peptidyl-prolyl cis-trans isomerase 7 ...   155   6e-38
>sp|P30415|NKTR_MOUSE NK-tumor recognition protein (Natural-killer cells
           cyclophilin-related protein) (NK-TR protein)
          Length = 1453

 Score =  165 bits (418), Expect = 8e-41
 Identities = 84/176 (47%), Positives = 115/176 (65%), Gaps = 1/176 (0%)
 Frame = +1

Query: 70  HMEIEIDEEPAGSFLIELYNDIVPKTCENFRALCTGEKGESKHNEVETFKLHYQNTIFYR 249
           H +IEI+ EP G  + +L++DI PKTC+NF  LC+GEKG  K       KL Y+ + F+R
Sbjct: 10  HFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGK---KLCYKGSTFHR 66

Query: 250 LVPNGWIQGGDIWYGRGSGGESIYGPTFEDESFAIKHDRRGILSMANRGRHTNQSQFFIT 429
           +V N  IQGGD   G G GGESIYG  F+DE+F +KHDR  +LSMANRG+HTN SQFFIT
Sbjct: 67  VVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFIT 126

Query: 430 LTPGTWMDTRYVAFGAIIEGSETLKKMEAVPT-MNERPVKNIKIKDAKVVEPKLAE 594
             P   +D  +V FG +I G E ++++E + T    RP  ++++ D  V+  KL +
Sbjct: 127 TKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLATKLTK 182
>sp|P30414|NKTR_HUMAN NK-tumor recognition protein (Natural-killer cells
           cyclophilin-related protein) (NK-TR protein)
          Length = 1462

 Score =  163 bits (413), Expect = 3e-40
 Identities = 83/173 (47%), Positives = 113/173 (65%), Gaps = 1/173 (0%)
 Frame = +1

Query: 70  HMEIEIDEEPAGSFLIELYNDIVPKTCENFRALCTGEKGESKHNEVETFKLHYQNTIFYR 249
           H +IEI+ EP G  + +L++DI PKTC+NF  LC+GEKG  K       KL Y+ + F+R
Sbjct: 10  HFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGK---KLCYKGSTFHR 66

Query: 250 LVPNGWIQGGDIWYGRGSGGESIYGPTFEDESFAIKHDRRGILSMANRGRHTNQSQFFIT 429
           +V N  IQGGD   G G GGESIYG  F+DE+F +KHDR  +LSMANRG+HTN SQFFIT
Sbjct: 67  VVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFIT 126

Query: 430 LTPGTWMDTRYVAFGAIIEGSETLKKMEAVPT-MNERPVKNIKIKDAKVVEPK 585
             P   +D  +V FG +I G E ++++E + T    RP  ++++ D  V+  K
Sbjct: 127 TKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLATK 179
>sp|Q9P3X9|PPID_NEUCR 41 kDa peptidyl-prolyl cis-trans isomerase (PPIase) (Rotamase)
           (Cyclophilin-41) (CYP-41)
          Length = 375

 Score =  163 bits (412), Expect = 4e-40
 Identities = 80/166 (48%), Positives = 108/166 (65%)
 Frame = +1

Query: 67  IHMEIEIDEEPAGSFLIELYNDIVPKTCENFRALCTGEKGESKHNEVETFKLHYQNTIFY 246
           +  +I I  + AG  + ELYNDIVPKT ENFRALCTGEKG  K  +     LHY+ + F+
Sbjct: 14  VFFDITIGGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGK----PLHYKGSTFH 69

Query: 247 RLVPNGWIQGGDIWYGRGSGGESIYGPTFEDESFAIKHDRRGILSMANRGRHTNQSQFFI 426
           R++    IQGGD   G G+GGESIYG  FEDE+F +KHDR  +LSMAN G  TN SQFF+
Sbjct: 70  RVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFV 129

Query: 427 TLTPGTWMDTRYVAFGAIIEGSETLKKMEAVPTMNERPVKNIKIKD 564
           T  P   +D ++V FG ++ G   ++++E + T  ++P K+  I D
Sbjct: 130 TTVPTPHLDGKHVVFGEVLSGKSVVRQIENLKTQGDKPTKDAVIAD 175
>sp|O55035|PPIG_RAT Peptidyl-prolyl cis-trans isomerase G (Peptidyl-prolyl isomerase G)
           (PPIase G) (Rotamase G) (Cyclophilin G) (Matrin
           cyclophilin) (Matrin-cyp)
          Length = 752

 Score =  163 bits (412), Expect = 4e-40
 Identities = 81/171 (47%), Positives = 112/171 (65%), Gaps = 1/171 (0%)
 Frame = +1

Query: 76  EIEIDEEPAGSFLIELYNDIVPKTCENFRALCTGEKGESKHNEVETFKLHYQNTIFYRLV 255
           +I I+ +PAG  + EL++D+ PKTCENFR LCTGEKG  K  +     LHY++ +F+R+V
Sbjct: 13  DIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKP---LHYKSCLFHRVV 69

Query: 256 PNGWIQGGDIWYGRGSGGESIYGPTFEDESFAIKHDRRGILSMANRGRHTNQSQFFITLT 435
            +  +QGGD   G G GGESIYG  FEDESFA+KH++  +LSMANRG+ TN SQFFIT  
Sbjct: 70  KDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTK 129

Query: 436 PGTWMDTRYVAFGAIIEGSETLKKMEAVPT-MNERPVKNIKIKDAKVVEPK 585
           P   +D  +V FG +I G E ++++E   T    +P   ++I     + PK
Sbjct: 130 PTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGELVPK 180
>sp|Q13427|PPIG_HUMAN Peptidyl-prolyl cis-trans isomerase G (Peptidyl-prolyl isomerase G)
           (PPIase G) (Rotamase G) (Cyclophilin G) (Clk-associating
           RS-cyclophilin) (CARS-cyclophilin) (CARS-Cyp)
           (SR-cyclophilin) (SRcyp) (SR-cyp) (CASP10)
          Length = 754

 Score =  162 bits (411), Expect = 5e-40
 Identities = 81/171 (47%), Positives = 112/171 (65%), Gaps = 1/171 (0%)
 Frame = +1

Query: 76  EIEIDEEPAGSFLIELYNDIVPKTCENFRALCTGEKGESKHNEVETFKLHYQNTIFYRLV 255
           +I I+ +PAG  + EL++D+ PKTCENFR LCTGEKG  K  +     LHY++ +F+R+V
Sbjct: 13  DIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKP---LHYKSCLFHRVV 69

Query: 256 PNGWIQGGDIWYGRGSGGESIYGPTFEDESFAIKHDRRGILSMANRGRHTNQSQFFITLT 435
            +  +QGGD   G G GGESIYG  FEDESFA+KH++  +LSMANRG+ TN SQFFIT  
Sbjct: 70  KDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTK 129

Query: 436 PGTWMDTRYVAFGAIIEGSETLKKMEAVPT-MNERPVKNIKIKDAKVVEPK 585
           P   +D  +V FG +I G E ++++E   T    +P   ++I     + PK
Sbjct: 130 PTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGELIPK 180
>sp|P34790|CYP1_ARATH Peptidyl-prolyl cis-trans isomerase (PPIase) (Rotamase)
           (Cyclophilin) (Cyclosporin A-binding protein)
          Length = 172

 Score =  160 bits (404), Expect = 3e-39
 Identities = 77/166 (46%), Positives = 108/166 (65%)
 Frame = +1

Query: 67  IHMEIEIDEEPAGSFLIELYNDIVPKTCENFRALCTGEKGESKHNEVETFKLHYQNTIFY 246
           ++ ++ ID +PAG  ++ELY D  P+T ENFRALCTGEKG     +     LH++ + F+
Sbjct: 6   VYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGK----PLHFKGSKFH 61

Query: 247 RLVPNGWIQGGDIWYGRGSGGESIYGPTFEDESFAIKHDRRGILSMANRGRHTNQSQFFI 426
           R++PN   QGGD   G G+GGESIYG  FEDE+F  KH   GILSMAN G +TN SQFFI
Sbjct: 62  RVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFI 121

Query: 427 TLTPGTWMDTRYVAFGAIIEGSETLKKMEAVPTMNERPVKNIKIKD 564
                 W+D ++V FG ++EG + +K +E V + + +P K + + D
Sbjct: 122 CTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVAD 167
>sp|P73789|PPI2_SYNY3 Peptidyl-prolyl cis-trans isomerase slr1251 (PPIase) (Rotamase)
          Length = 171

 Score =  158 bits (400), Expect = 1e-38
 Identities = 76/166 (45%), Positives = 111/166 (66%)
 Frame = +1

Query: 67  IHMEIEIDEEPAGSFLIELYNDIVPKTCENFRALCTGEKGESKHNEVETFKLHYQNTIFY 246
           +  +I I  + AG  ++EL++++ PKT ENFRALCTGEKG  K  +     LH++ + F+
Sbjct: 5   VFFDITIGSDTAGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGK----PLHFKGSHFH 60

Query: 247 RLVPNGWIQGGDIWYGRGSGGESIYGPTFEDESFAIKHDRRGILSMANRGRHTNQSQFFI 426
           R++ +   QGGD   G G+GGESIYG  F DE+F +KHDR G+LSMAN G +TN SQFF+
Sbjct: 61  RVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFL 120

Query: 427 TLTPGTWMDTRYVAFGAIIEGSETLKKMEAVPTMNERPVKNIKIKD 564
           T  P  W+D ++V FG ++EG E L+++EA  + + +  + I I D
Sbjct: 121 TFVPCPWLDGKHVVFGEVVEGLEILEQLEANGSQSGQTKQAIVISD 166
>sp|P52009|CYP1_CAEEL Peptidyl-prolyl cis-trans isomerase 1 (PPIase) (Rotamase)
           (Cyclophilin-1)
          Length = 192

 Score =  158 bits (399), Expect = 1e-38
 Identities = 77/166 (46%), Positives = 105/166 (63%)
 Frame = +1

Query: 67  IHMEIEIDEEPAGSFLIELYNDIVPKTCENFRALCTGEKGESKHNEVETFKLHYQNTIFY 246
           +  ++ I EEPAG   +EL+ND+VPKT ENFRALCTGEKG  +        LH++ + F+
Sbjct: 24  VFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVA----LHFKGSKFH 79

Query: 247 RLVPNGWIQGGDIWYGRGSGGESIYGPTFEDESFAIKHDRRGILSMANRGRHTNQSQFFI 426
           R++P   IQGGD     G+GGESIYG  F+DE+F +KH   G LSMAN G +TN SQFFI
Sbjct: 80  RIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFI 139

Query: 427 TLTPGTWMDTRYVAFGAIIEGSETLKKMEAVPTMNERPVKNIKIKD 564
                 W+D  +V FG + +G   +KK+E + + +  P K + I D
Sbjct: 140 CTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMGSRSGAPAKTVTIAD 185
>sp|P52010|CYP2_CAEEL Peptidyl-prolyl cis-trans isomerase 2 (PPIase) (Rotamase)
           (Cyclophilin-2)
          Length = 172

 Score =  157 bits (398), Expect = 2e-38
 Identities = 78/168 (46%), Positives = 109/168 (64%)
 Frame = +1

Query: 61  IYIHMEIEIDEEPAGSFLIELYNDIVPKTCENFRALCTGEKGESKHNEVETFKLHYQNTI 240
           + +  +I I  +  G  ++ELYNDIVPKT ENFRALCTGEKG+ K  +    KLH++ + 
Sbjct: 4   VKVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGK----KLHFKGSK 59

Query: 241 FYRLVPNGWIQGGDIWYGRGSGGESIYGPTFEDESFAIKHDRRGILSMANRGRHTNQSQF 420
           F+R++P   IQGGD   G G+GGESI+G  F+DE+F  KH   G+LSMAN G +TN SQF
Sbjct: 60  FHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQF 119

Query: 421 FITLTPGTWMDTRYVAFGAIIEGSETLKKMEAVPTMNERPVKNIKIKD 564
           F+     TW+D ++V FG +IEG + +K +E+  + +  P     I D
Sbjct: 120 FLCTVKTTWLDGKHVVFGKVIEGMDVVKAIESKGSEDGAPSAPCVIAD 167
>sp|P52015|CYP7_CAEEL Peptidyl-prolyl cis-trans isomerase 7 (PPIase) (Rotamase)
           (Cyclophilin-7)
          Length = 171

 Score =  155 bits (393), Expect = 6e-38
 Identities = 77/166 (46%), Positives = 104/166 (62%)
 Frame = +1

Query: 67  IHMEIEIDEEPAGSFLIELYNDIVPKTCENFRALCTGEKGESKHNEVETFKLHYQNTIFY 246
           +  +I I  +P G  ++ELYNDIVPKT ENFRALCTGEKG  K  +     LH++ + F+
Sbjct: 6   VFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGK----PLHFKGSKFH 61

Query: 247 RLVPNGWIQGGDIWYGRGSGGESIYGPTFEDESFAIKHDRRGILSMANRGRHTNQSQFFI 426
           R++P   IQGGD   G G+GGESIYG  F DE+F  KH   G+LSMAN G +TN SQFF+
Sbjct: 62  RIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFL 121

Query: 427 TLTPGTWMDTRYVAFGAIIEGSETLKKMEAVPTMNERPVKNIKIKD 564
                 W+D ++V FG ++EG + + K+E   + +  P     I D
Sbjct: 122 CTVKTAWLDGKHVVFGRVVEGLDIVSKVEGNGSSSGTPKSECLIAD 167
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,624,348
Number of Sequences: 369166
Number of extensions: 1704583
Number of successful extensions: 4811
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4654
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5169945420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)