Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02679
(833 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P32023|KGP25_DROME cGMP-dependent protein kinase, isozym... 304 2e-82
sp|Q03043|KGP24_DROME cGMP-dependent protein kinase, isozym... 304 2e-82
sp|P14619|KGP1B_HUMAN cGMP-dependent protein kinase 1, beta... 290 3e-78
sp|P00516|KGP1A_BOVIN cGMP-dependent protein kinase 1, alph... 290 3e-78
sp|Q13976|KGP1A_HUMAN cGMP-dependent protein kinase 1, alph... 290 3e-78
sp|P21136|KGP1B_BOVIN cGMP-dependent protein kinase 1, beta... 290 3e-78
sp|Q9Z0Z0|KGP1B_MOUSE cGMP-dependent protein kinase 1, beta... 290 4e-78
sp|O77676|KGP1A_RABIT cGMP-dependent protein kinase 1, alph... 285 1e-76
sp|Q03042|KGP1_DROME cGMP-dependent protein kinase, isozyme... 241 2e-63
sp|Q64595|KGP2_RAT cGMP-dependent protein kinase 2 (CGK 2) ... 223 4e-58
>sp|P32023|KGP25_DROME cGMP-dependent protein kinase, isozyme 2 forms cD5/T2 (CGK) (Foraging
protein)
Length = 934
Score = 304 bits (778), Expect = 2e-82
Identities = 153/278 (55%), Positives = 200/278 (71%), Gaps = 2/278 (0%)
Frame = +2
Query: 2 SIMMKTGLRKQEDYIRFLKSVPTFQDMKVETLGKIAGVLGENHYSQGDYIIREGAKGDTF 181
+IMM+TGL +Q +Y FLKSVP F+D+ +TL KI+ VL E HY +GDYI+R+GA+GDTF
Sbjct: 462 TIMMRTGLIRQAEYSDFLKSVPIFKDLAEDTLIKISDVLEETHYQRGDYIVRQGARGDTF 521
Query: 182 YIIXXXXXXXXXXXXXXXXXXFIRFLERGSWFGEKALRDEDVRTASIIAESPTGVDCLVL 361
+II FIR L +G +FGEKAL+ +D+RTA+II ES GV CLV+
Sbjct: 522 FIISKGKVRVTIKQQDTQEEKFIRMLGKGDFFGEKALQGDDLRTANIICESADGVSCLVI 581
Query: 362 DRESYNLLIGDIVNFDKQYADDDKARRR--TSKFPELALRDLCVITTLGVGGFGRVELVR 535
DRE++N LI ++ +Y D+ RR +F ++ L DL VI TLGVGGFGRVELV+
Sbjct: 582 DRETFNQLISNLDEIKHRYDDEGAMERRKINEEFRDINLTDLRVIATLGVGGFGRVELVQ 641
Query: 536 IGNDDRRTFALKVLKKCHIVETHQQEHVMNERDILMEVDSDFIVKLFKTFKDRRYLYMLM 715
D R+FALK +KK IVET QQ+H+M+E++I+ E + FIVKLFKTFKD++YLYMLM
Sbjct: 642 TNGDSSRSFALKQMKKSQIVETRQQQHIMSEKEIMGEANCQFIVKLFKTFKDKKYLYMLM 701
Query: 716 EVCLGGEVWTILREKVSFDDVTTKFYTASIVLALEYLH 829
E CLGGE+WTILR+K +FDD TT+FYTA +V A +YLH
Sbjct: 702 ESCLGGELWTILRDKGNFDDSTTRFYTACVVEAFDYLH 739
>sp|Q03043|KGP24_DROME cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B (CGK)
(Foraging protein)
Length = 1088
Score = 304 bits (778), Expect = 2e-82
Identities = 153/278 (55%), Positives = 200/278 (71%), Gaps = 2/278 (0%)
Frame = +2
Query: 2 SIMMKTGLRKQEDYIRFLKSVPTFQDMKVETLGKIAGVLGENHYSQGDYIIREGAKGDTF 181
+IMM+TGL +Q +Y FLKSVP F+D+ +TL KI+ VL E HY +GDYI+R+GA+GDTF
Sbjct: 616 TIMMRTGLIRQAEYSDFLKSVPIFKDLAEDTLIKISDVLEETHYQRGDYIVRQGARGDTF 675
Query: 182 YIIXXXXXXXXXXXXXXXXXXFIRFLERGSWFGEKALRDEDVRTASIIAESPTGVDCLVL 361
+II FIR L +G +FGEKAL+ +D+RTA+II ES GV CLV+
Sbjct: 676 FIISKGKVRVTIKQQDTQEEKFIRMLGKGDFFGEKALQGDDLRTANIICESADGVSCLVI 735
Query: 362 DRESYNLLIGDIVNFDKQYADDDKARRR--TSKFPELALRDLCVITTLGVGGFGRVELVR 535
DRE++N LI ++ +Y D+ RR +F ++ L DL VI TLGVGGFGRVELV+
Sbjct: 736 DRETFNQLISNLDEIKHRYDDEGAMERRKINEEFRDINLTDLRVIATLGVGGFGRVELVQ 795
Query: 536 IGNDDRRTFALKVLKKCHIVETHQQEHVMNERDILMEVDSDFIVKLFKTFKDRRYLYMLM 715
D R+FALK +KK IVET QQ+H+M+E++I+ E + FIVKLFKTFKD++YLYMLM
Sbjct: 796 TNGDSSRSFALKQMKKSQIVETRQQQHIMSEKEIMGEANCQFIVKLFKTFKDKKYLYMLM 855
Query: 716 EVCLGGEVWTILREKVSFDDVTTKFYTASIVLALEYLH 829
E CLGGE+WTILR+K +FDD TT+FYTA +V A +YLH
Sbjct: 856 ESCLGGELWTILRDKGNFDDSTTRFYTACVVEAFDYLH 893
>sp|P14619|KGP1B_HUMAN cGMP-dependent protein kinase 1, beta isozyme (cGK 1 beta)
(cGKI-beta)
Length = 686
Score = 290 bits (742), Expect = 3e-78
Identities = 146/280 (52%), Positives = 196/280 (70%), Gaps = 4/280 (1%)
Frame = +2
Query: 2 SIMMKTGLRKQEDYIRFLKSVPTFQDMKVETLGKIAGVLGENHYSQGDYIIREGAKGDTF 181
+IMM+TGL K +Y+ FLKSVPTFQ + E L K+A VL E HY G+YIIR+GA+GDTF
Sbjct: 214 TIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTF 273
Query: 182 YIIXXXXXXXXXXXXXXXXXXFIRFLERGSWFGEKALRDEDVRTASIIAESPTGVDCLVL 361
+II F+R L +G WFGEKAL+ EDVRTA++IA V CLV+
Sbjct: 274 FIISKGTVNVTREDSPSEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAE--AVTCLVI 331
Query: 362 DRESYNLLIGDIVNFDKQYADDDKARRR----TSKFPELALRDLCVITTLGVGGFGRVEL 529
DR+S+ LIG + + + +D +A+ + + F L L D +I TLGVGGFGRVEL
Sbjct: 332 DRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLKLSDFNIIDTLGVGGFGRVEL 391
Query: 530 VRIGNDDRRTFALKVLKKCHIVETHQQEHVMNERDILMEVDSDFIVKLFKTFKDRRYLYM 709
V++ +++ +TFA+K+LKK HIV+T QQEH+ +E+ I+ SDFIV+L++TFKD +YLYM
Sbjct: 392 VQLKSEESKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYM 451
Query: 710 LMEVCLGGEVWTILREKVSFDDVTTKFYTASIVLALEYLH 829
LME CLGGE+WTILR++ SF+D TT+FYTA +V A YLH
Sbjct: 452 LMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLH 491
>sp|P00516|KGP1A_BOVIN cGMP-dependent protein kinase 1, alpha isozyme (CGK 1 alpha)
(CGKI-alpha)
Length = 671
Score = 290 bits (742), Expect = 3e-78
Identities = 146/280 (52%), Positives = 196/280 (70%), Gaps = 4/280 (1%)
Frame = +2
Query: 2 SIMMKTGLRKQEDYIRFLKSVPTFQDMKVETLGKIAGVLGENHYSQGDYIIREGAKGDTF 181
+IMM+TGL K +Y+ FLKSVPTFQ + E L K+A VL E HY G+YIIR+GA+GDTF
Sbjct: 199 TIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTF 258
Query: 182 YIIXXXXXXXXXXXXXXXXXXFIRFLERGSWFGEKALRDEDVRTASIIAESPTGVDCLVL 361
+II F+R L +G WFGEKAL+ EDVRTA++IA V CLV+
Sbjct: 259 FIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAE--AVTCLVI 316
Query: 362 DRESYNLLIGDIVNFDKQYADDDKARRR----TSKFPELALRDLCVITTLGVGGFGRVEL 529
DR+S+ LIG + + + +D +A+ + + F L L D +I TLGVGGFGRVEL
Sbjct: 317 DRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLKLSDFNIIDTLGVGGFGRVEL 376
Query: 530 VRIGNDDRRTFALKVLKKCHIVETHQQEHVMNERDILMEVDSDFIVKLFKTFKDRRYLYM 709
V++ +++ +TFA+K+LKK HIV+T QQEH+ +E+ I+ SDFIV+L++TFKD +YLYM
Sbjct: 377 VQLKSEESKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYM 436
Query: 710 LMEVCLGGEVWTILREKVSFDDVTTKFYTASIVLALEYLH 829
LME CLGGE+WTILR++ SF+D TT+FYTA +V A YLH
Sbjct: 437 LMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLH 476
>sp|Q13976|KGP1A_HUMAN cGMP-dependent protein kinase 1, alpha isozyme (CGK 1 alpha)
(cGKI-alpha)
Length = 671
Score = 290 bits (742), Expect = 3e-78
Identities = 146/280 (52%), Positives = 196/280 (70%), Gaps = 4/280 (1%)
Frame = +2
Query: 2 SIMMKTGLRKQEDYIRFLKSVPTFQDMKVETLGKIAGVLGENHYSQGDYIIREGAKGDTF 181
+IMM+TGL K +Y+ FLKSVPTFQ + E L K+A VL E HY G+YIIR+GA+GDTF
Sbjct: 199 TIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTF 258
Query: 182 YIIXXXXXXXXXXXXXXXXXXFIRFLERGSWFGEKALRDEDVRTASIIAESPTGVDCLVL 361
+II F+R L +G WFGEKAL+ EDVRTA++IA V CLV+
Sbjct: 259 FIISKGTVNVTREDSPSEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAE--AVTCLVI 316
Query: 362 DRESYNLLIGDIVNFDKQYADDDKARRR----TSKFPELALRDLCVITTLGVGGFGRVEL 529
DR+S+ LIG + + + +D +A+ + + F L L D +I TLGVGGFGRVEL
Sbjct: 317 DRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLKLSDFNIIDTLGVGGFGRVEL 376
Query: 530 VRIGNDDRRTFALKVLKKCHIVETHQQEHVMNERDILMEVDSDFIVKLFKTFKDRRYLYM 709
V++ +++ +TFA+K+LKK HIV+T QQEH+ +E+ I+ SDFIV+L++TFKD +YLYM
Sbjct: 377 VQLKSEESKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYM 436
Query: 710 LMEVCLGGEVWTILREKVSFDDVTTKFYTASIVLALEYLH 829
LME CLGGE+WTILR++ SF+D TT+FYTA +V A YLH
Sbjct: 437 LMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLH 476
>sp|P21136|KGP1B_BOVIN cGMP-dependent protein kinase 1, beta isozyme (CGK 1 beta)
(cGKI-beta)
Length = 686
Score = 290 bits (742), Expect = 3e-78
Identities = 146/280 (52%), Positives = 196/280 (70%), Gaps = 4/280 (1%)
Frame = +2
Query: 2 SIMMKTGLRKQEDYIRFLKSVPTFQDMKVETLGKIAGVLGENHYSQGDYIIREGAKGDTF 181
+IMM+TGL K +Y+ FLKSVPTFQ + E L K+A VL E HY G+YIIR+GA+GDTF
Sbjct: 214 TIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTF 273
Query: 182 YIIXXXXXXXXXXXXXXXXXXFIRFLERGSWFGEKALRDEDVRTASIIAESPTGVDCLVL 361
+II F+R L +G WFGEKAL+ EDVRTA++IA V CLV+
Sbjct: 274 FIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAE--AVTCLVI 331
Query: 362 DRESYNLLIGDIVNFDKQYADDDKARRR----TSKFPELALRDLCVITTLGVGGFGRVEL 529
DR+S+ LIG + + + +D +A+ + + F L L D +I TLGVGGFGRVEL
Sbjct: 332 DRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLKLSDFNIIDTLGVGGFGRVEL 391
Query: 530 VRIGNDDRRTFALKVLKKCHIVETHQQEHVMNERDILMEVDSDFIVKLFKTFKDRRYLYM 709
V++ +++ +TFA+K+LKK HIV+T QQEH+ +E+ I+ SDFIV+L++TFKD +YLYM
Sbjct: 392 VQLKSEESKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYM 451
Query: 710 LMEVCLGGEVWTILREKVSFDDVTTKFYTASIVLALEYLH 829
LME CLGGE+WTILR++ SF+D TT+FYTA +V A YLH
Sbjct: 452 LMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLH 491
>sp|Q9Z0Z0|KGP1B_MOUSE cGMP-dependent protein kinase 1, beta isozyme (CGK 1 beta)
(cGKI-beta)
Length = 686
Score = 290 bits (741), Expect = 4e-78
Identities = 146/280 (52%), Positives = 196/280 (70%), Gaps = 4/280 (1%)
Frame = +2
Query: 2 SIMMKTGLRKQEDYIRFLKSVPTFQDMKVETLGKIAGVLGENHYSQGDYIIREGAKGDTF 181
+IMM+TGL K +Y+ FLKSVPTFQ + E L K+A VL E HY G+YIIR+GA+GDTF
Sbjct: 214 TIMMRTGLIKHTEYMEFLKSVPTFQSLPDEILSKLADVLEETHYENGEYIIRQGARGDTF 273
Query: 182 YIIXXXXXXXXXXXXXXXXXXFIRFLERGSWFGEKALRDEDVRTASIIAESPTGVDCLVL 361
+II F+R L +G WFGEKAL+ EDVRTA++IA V CLV+
Sbjct: 274 FIISKGQVNVTREDSPSEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAE--AVTCLVI 331
Query: 362 DRESYNLLIGDIVNFDKQYADDDKARRR----TSKFPELALRDLCVITTLGVGGFGRVEL 529
DR+S+ LIG + + + +D +A+ + + F L L D +I TLGVGGFGRVEL
Sbjct: 332 DRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLKLSDFNIIDTLGVGGFGRVEL 391
Query: 530 VRIGNDDRRTFALKVLKKCHIVETHQQEHVMNERDILMEVDSDFIVKLFKTFKDRRYLYM 709
V++ +++ +TFA+K+LKK HIV+T QQEH+ +E+ I+ SDFIV+L++TFKD +YLYM
Sbjct: 392 VQLKSEESKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYM 451
Query: 710 LMEVCLGGEVWTILREKVSFDDVTTKFYTASIVLALEYLH 829
LME CLGGE+WTILR++ SF+D TT+FYTA +V A YLH
Sbjct: 452 LMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLH 491
>sp|O77676|KGP1A_RABIT cGMP-dependent protein kinase 1, alpha isozyme (CGK 1 alpha)
(cGKI-alpha)
Length = 671
Score = 285 bits (728), Expect = 1e-76
Identities = 144/280 (51%), Positives = 194/280 (69%), Gaps = 4/280 (1%)
Frame = +2
Query: 2 SIMMKTGLRKQEDYIRFLKSVPTFQDMKVETLGKIAGVLGENHYSQGDYIIREGAKGDTF 181
+IMM+TGL K +Y+ FLKSVPTFQ + E L K+A VL E HY +Y IR+GA+GDTF
Sbjct: 199 TIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENEEYSIRQGARGDTF 258
Query: 182 YIIXXXXXXXXXXXXXXXXXXFIRFLERGSWFGEKALRDEDVRTASIIAESPTGVDCLVL 361
+II F+R L +G WFGEKAL+ EDVRTA++IA V CLV+
Sbjct: 259 FIISKGKVNVTREDSPSEDPIFLRTLGKGDWFGEKALQGEDVRTANVIAAE--AVTCLVI 316
Query: 362 DRESYNLLIGDIVNFDKQYADDDKARRR----TSKFPELALRDLCVITTLGVGGFGRVEL 529
DR+S+ LIG + + + +D +A+ + + F L L D +I TLGVGGFGRVEL
Sbjct: 317 DRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLKLSDFNIIDTLGVGGFGRVEL 376
Query: 530 VRIGNDDRRTFALKVLKKCHIVETHQQEHVMNERDILMEVDSDFIVKLFKTFKDRRYLYM 709
V++ +++ +TFA+K+LKK HIV+T QQEH+ +E+ I+ SDFIV+L++TFKD +YLYM
Sbjct: 377 VQLKSEESKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHSDFIVRLYRTFKDSKYLYM 436
Query: 710 LMEVCLGGEVWTILREKVSFDDVTTKFYTASIVLALEYLH 829
LME CLGGE+WTILR++ SF+D TT+FYTA +V A YLH
Sbjct: 437 LMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLH 476
>sp|Q03042|KGP1_DROME cGMP-dependent protein kinase, isozyme 1 (CGK)
Length = 768
Score = 241 bits (615), Expect = 2e-63
Identities = 132/293 (45%), Positives = 185/293 (63%), Gaps = 18/293 (6%)
Frame = +2
Query: 5 IMMKTGLRKQEDYIRFLKSVPTFQDMKVETLGKIAGVLGENHYSQGDYIIREGAKGDTFY 184
IMM TGL++ E+ + FL+SVP ++ E L KIA VL Y+ G YIIR+G GD+F+
Sbjct: 283 IMMCTGLQRIENSVNFLRSVPLLMNLSEELLAKIADVLELEFYAAGTYIIRQGTAGDSFF 342
Query: 185 IIXXXXXXXXXXXXXXXXXXF-IRFLERGSWFGEKALRDEDVRTASIIAESPTGVDCLVL 361
+I +R L RG +FGE+AL +ED RTA+IIA SP GV+CL L
Sbjct: 343 LISQGNVRVTQKLTPTSPEETELRTLSRGDYFGEQALINEDKRTANIIALSP-GVECLTL 401
Query: 362 DRESYNLLIGDIVNF-DKQYAD---------------DDKARRRTSKFPELALRDLCVIT 493
DR+S+ LIGD+ +K Y D D+ + +FP+L L DL V++
Sbjct: 402 DRDSFKRLIGDLCELKEKDYGDESRKLAMKQAQESCRDEPKEQLQQEFPDLKLTDLEVVS 461
Query: 494 TLGVGGFGRVELVRIGNDDR-RTFALKVLKKCHIVETHQQEHVMNERDILMEVDSDFIVK 670
TLG+GGFGRVELV+ + DR FALK LKK HIV+T Q+EH+ +ER I++ S FI +
Sbjct: 462 TLGIGGFGRVELVKAHHQDRVDIFALKCLKKRHIVDTKQEEHIFSERHIMLSSRSPFICR 521
Query: 671 LFKTFKDRRYLYMLMEVCLGGEVWTILREKVSFDDVTTKFYTASIVLALEYLH 829
L++TF+D +Y+YML+E C+GGE+WT+LR++ SF+D +F ++ A EYLH
Sbjct: 522 LYRTFRDEKYVYMLLEACMGGEIWTMLRDRGSFEDNAAQFIIGCVLQAFEYLH 574
>sp|Q64595|KGP2_RAT cGMP-dependent protein kinase 2 (CGK 2) (cGKII) (Type II
cGMP-dependent protein kinase)
Length = 762
Score = 223 bits (569), Expect = 4e-58
Identities = 126/308 (40%), Positives = 184/308 (59%), Gaps = 31/308 (10%)
Frame = +2
Query: 2 SIMMKTGLRKQEDYIRFLKSVPTFQDMKVETLGKIAGVLGENHYSQGDYIIREGAKGDTF 181
+IM +T + E+Y FL+SV +++ + L KI L +Y +GDYIIREG +G TF
Sbjct: 264 NIMRRTAQARDEEYRNFLRSVSLLKNLPEDKLTKIIDCLEVEYYDKGDYIIREGEEGSTF 323
Query: 182 YIIXXXXXXXXXXXXXXXXXXFIRFLERGSWFGEKALRDEDVRTASIIAESPTGVDCLVL 361
+I+ I+ L++G +FGEKAL +DVR+A+IIAE V CLV+
Sbjct: 324 FILAKGKVKVTQSTEGHDQPQLIKTLQKGEYFGEKALISDDVRSANIIAEE-NDVACLVI 382
Query: 362 DRESYNLLIGDIVNFDKQY--------ADDDK----------------------ARRRTS 451
DRE++N +G K DD+K + + +
Sbjct: 383 DRETFNQTVGTFDELQKYLEGYVATLNRDDEKRHAKRSMSSWKLSKALSLEMIQLKEKVA 442
Query: 452 KFPELA-LRDLCVITTLGVGGFGRVELVRIGNDDRRTFALKVLKKCHIVETHQQEHVMNE 628
+F + ++L +I TLGVGGFGRVELV++ N++ FA+K ++K HIV+T QQEHV +E
Sbjct: 443 RFSSTSPFQNLEIIATLGVGGFGRVELVKVKNEN-IAFAMKCIRKKHIVDTKQQEHVYSE 501
Query: 629 RDILMEVDSDFIVKLFKTFKDRRYLYMLMEVCLGGEVWTILREKVSFDDVTTKFYTASIV 808
+ IL E+ S FIVKL++TFKD +Y+YML+E CLGGE+W+ILR++ SFD+ T+KF A +
Sbjct: 502 KRILEELCSPFIVKLYRTFKDNKYVYMLLEACLGGELWSILRDRGSFDEPTSKFCVACVT 561
Query: 809 LALEYLHR 832
A +YLHR
Sbjct: 562 EAFDYLHR 569
Score = 31.6 bits (70), Expect = 2.8
Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 1/159 (0%)
Frame = +2
Query: 128 HYSQGDYIIREGAKGDTFYIIXXXXXXXXXXXXXXXXXXFIRFLERGSWFGEKALRDEDV 307
+Y QG YI+++G G+ +++ + + + FGE A+
Sbjct: 188 NYQQGSYIVKQGEPGNHIFVL------AEGRLEVFQGEKLLSSIPMWTTFGELAILYNCT 241
Query: 308 RTASIIAESPTGVDCLVLDRESY-NLLIGDIVNFDKQYADDDKARRRTSKFPELALRDLC 484
RTAS+ ++ T V LDRE + N++ D++Y + ++ PE L
Sbjct: 242 RTASV--KAITNVKTWALDREVFQNIMRRTAQARDEEYRNFLRSVSLLKNLPEDKLTK-- 297
Query: 485 VITTLGVGGFGRVELVRIGNDDRRTFALKVLKKCHIVET 601
+I L V + + + + ++ TF + K + ++
Sbjct: 298 IIDCLEVEYYDKGDYIIREGEEGSTFFILAKGKVKVTQS 336
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,909,908
Number of Sequences: 369166
Number of extensions: 1795368
Number of successful extensions: 6092
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5786
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8100769320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)