Planaria EST Database


DrC_02585

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02585
         (507 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P70083|AT2A1_MAKNI  Sarcoplasmic/endoplasmic reticulum ca...   272   3e-73
sp|P35316|ATC_ARTSF  Calcium-transporting ATPase sarcoplasmi...   270   1e-72
sp|P13585|AT2A1_CHICK  Sarcoplasmic/endoplasmic reticulum ca...   270   1e-72
sp|O14983|AT2A1_HUMAN  Sarcoplasmic/endoplasmic reticulum ca...   270   2e-72
sp|Q64578|AT2A1_RAT  Sarcoplasmic/endoplasmic reticulum calc...   269   2e-72
sp|Q8R429|AT2A1_MOUSE  Sarcoplasmic/endoplasmic reticulum ca...   269   2e-72
sp|P04191|AT2A1_RABIT  Sarcoplasmic/endoplasmic reticulum ca...   268   5e-72
sp|P22700|ATC1_DROME  Calcium-transporting ATPase sarcoplasm...   268   5e-72
sp|Q92105|AT2A1_RANES  Sarcoplasmic/endoplasmic reticulum ca...   268   7e-72
sp|P20647|AT2A2_RABIT  Sarcoplasmic/endoplasmic reticulum ca...   267   1e-71
>sp|P70083|AT2A1_MAKNI Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Calcium pump 1)
            (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, fast twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 996

 Score =  272 bits (696), Expect = 3e-73
 Identities = 137/167 (82%), Positives = 143/167 (85%)
 Frame = +2

Query: 2    HDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 181
            +DAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFS+IVAAVEEGRAIYNNMKQFIRYLI
Sbjct: 703  NDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLI 762

Query: 182  SSNVGEVVSIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSTK 361
            SSNVGEVV IFLTAALG+PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRS K
Sbjct: 763  SSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSPK 822

Query: 362  EPLITGWLFFRYMXXXXXXXXXXXXXXXWWFTIYPRGPQLNYYQLTH 502
            EPLI+GWLFFRYM               WWF     GP + YYQL+H
Sbjct: 823  EPLISGWLFFRYMAIGGYVGAATVGGAAWWFLYDSTGPAVTYYQLSH 869
>sp|P35316|ATC_ARTSF Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type
            (Calcium pump)
          Length = 1003

 Score =  270 bits (690), Expect = 1e-72
 Identities = 136/168 (80%), Positives = 143/168 (85%)
 Frame = +2

Query: 2    HDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 181
            +DAPALKKAEIGIAMGSGTAVAKSA+EMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI
Sbjct: 710  NDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 769

Query: 182  SSNVGEVVSIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSTK 361
            SSN+GEVVSIFLTAALG+PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIM KPPR   
Sbjct: 770  SSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRRAD 829

Query: 362  EPLITGWLFFRYMXXXXXXXXXXXXXXXWWFTIYPRGPQLNYYQLTHH 505
            E LITGWLFFRYM                WF + P GP LN+YQL+HH
Sbjct: 830  EGLITGWLFFRYMAIGTYVGAATVGAAAHWFMMSPTGPGLNFYQLSHH 877
>sp|P13585|AT2A1_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Calcium pump 1)
            (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, fast twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 994

 Score =  270 bits (690), Expect = 1e-72
 Identities = 136/167 (81%), Positives = 142/167 (85%)
 Frame = +2

Query: 2    HDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 181
            +DAPALKKAEIGIAMGSGTAVAK+ASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI
Sbjct: 706  NDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 765

Query: 182  SSNVGEVVSIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSTK 361
            SSNVGEVV IFLTAALG+PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIM KPPRS K
Sbjct: 766  SSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRSPK 825

Query: 362  EPLITGWLFFRYMXXXXXXXXXXXXXXXWWFTIYPRGPQLNYYQLTH 502
            EPLI+GWLFFRY+               WWF     GP L Y+QLTH
Sbjct: 826  EPLISGWLFFRYLAIGGYVGAATVGAAAWWFLYAEDGPSLTYHQLTH 872
>sp|O14983|AT2A1_HUMAN Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Calcium pump 1)
            (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, fast twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1001

 Score =  270 bits (689), Expect = 2e-72
 Identities = 136/167 (81%), Positives = 142/167 (85%)
 Frame = +2

Query: 2    HDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 181
            +DAPALKKAEIGIAMGSGTAVAK+ASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI
Sbjct: 706  NDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 765

Query: 182  SSNVGEVVSIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSTK 361
            SSNVGEVV IFLTAALG+PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPRS K
Sbjct: 766  SSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPK 825

Query: 362  EPLITGWLFFRYMXXXXXXXXXXXXXXXWWFTIYPRGPQLNYYQLTH 502
            EPLI+GWLFFRYM               WWF     GP +NY QLTH
Sbjct: 826  EPLISGWLFFRYMAIGGYVGAATVGAAAWWFLYAEDGPHVNYSQLTH 872
>sp|Q64578|AT2A1_RAT Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Calcium pump 1)
            (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, fast twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 994

 Score =  269 bits (688), Expect = 2e-72
 Identities = 135/167 (80%), Positives = 143/167 (85%)
 Frame = +2

Query: 2    HDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 181
            +DAPALKKAEIGIAMGSGTAVAK+ASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI
Sbjct: 706  NDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 765

Query: 182  SSNVGEVVSIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSTK 361
            SSNVGEVV IFLTAALG+PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPRS K
Sbjct: 766  SSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPK 825

Query: 362  EPLITGWLFFRYMXXXXXXXXXXXXXXXWWFTIYPRGPQLNYYQLTH 502
            EPLI+GWLFFRYM               WWF     GP ++Y+QLTH
Sbjct: 826  EPLISGWLFFRYMAIGGYVGAATVGAAAWWFLYAEDGPHVSYHQLTH 872
>sp|Q8R429|AT2A1_MOUSE Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Calcium pump 1)
            (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, fast twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 994

 Score =  269 bits (688), Expect = 2e-72
 Identities = 135/167 (80%), Positives = 143/167 (85%)
 Frame = +2

Query: 2    HDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 181
            +DAPALKKAEIGIAMGSGTAVAK+ASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI
Sbjct: 706  NDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 765

Query: 182  SSNVGEVVSIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSTK 361
            SSNVGEVV IFLTAALG+PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPRS K
Sbjct: 766  SSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPK 825

Query: 362  EPLITGWLFFRYMXXXXXXXXXXXXXXXWWFTIYPRGPQLNYYQLTH 502
            EPLI+GWLFFRYM               WWF     GP ++Y+QLTH
Sbjct: 826  EPLISGWLFFRYMAIGGYVGAATVGAAAWWFLYAEDGPHVSYHQLTH 872
>sp|P04191|AT2A1_RABIT Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Calcium pump 1)
            (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, fast twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1001

 Score =  268 bits (685), Expect = 5e-72
 Identities = 135/167 (80%), Positives = 142/167 (85%)
 Frame = +2

Query: 2    HDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 181
            +DAPALKKAEIGIAMGSGTAVAK+ASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI
Sbjct: 706  NDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 765

Query: 182  SSNVGEVVSIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSTK 361
            SSNVGEVV IFLTAALG+PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPRS K
Sbjct: 766  SSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPK 825

Query: 362  EPLITGWLFFRYMXXXXXXXXXXXXXXXWWFTIYPRGPQLNYYQLTH 502
            EPLI+GWLFFRYM               WWF     GP + Y+QLTH
Sbjct: 826  EPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTH 872
>sp|P22700|ATC1_DROME Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type
            (Calcium pump)
          Length = 1020

 Score =  268 bits (685), Expect = 5e-72
 Identities = 133/168 (79%), Positives = 143/168 (85%)
 Frame = +2

Query: 2    HDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 181
            +DAPALKKAEIGIAMGSGTAVAKSA+EMVLADDNFS+IV+AVEEGRAIYNNMKQFIRYLI
Sbjct: 706  NDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLI 765

Query: 182  SSNVGEVVSIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSTK 361
            SSN+GEVVSIFLTAALG+PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIM KPPR   
Sbjct: 766  SSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRKAD 825

Query: 362  EPLITGWLFFRYMXXXXXXXXXXXXXXXWWFTIYPRGPQLNYYQLTHH 505
            E LI+GWLFFRYM               WWF     GP+L+Y+QLTHH
Sbjct: 826  EGLISGWLFFRYMAIGFYVGAATVGAAAWWFVFSDEGPKLSYWQLTHH 873
>sp|Q92105|AT2A1_RANES Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Calcium pump 1)
            (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, fast twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 994

 Score =  268 bits (684), Expect = 7e-72
 Identities = 134/167 (80%), Positives = 142/167 (85%)
 Frame = +2

Query: 2    HDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 181
            +DAPALKKAEIGIAMGSGTAVAK+ASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI
Sbjct: 706  NDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 765

Query: 182  SSNVGEVVSIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSTK 361
            SSNVGEVV IFLTAALG+PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIM +PPRS K
Sbjct: 766  SSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPK 825

Query: 362  EPLITGWLFFRYMXXXXXXXXXXXXXXXWWFTIYPRGPQLNYYQLTH 502
            EPLI+GWLFFRYM               WWF     GP + +YQL+H
Sbjct: 826  EPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYADDGPNVTFYQLSH 872
>sp|P20647|AT2A2_RABIT Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (Calcium pump 2)
            (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting
            ATPase sarcoplasmic reticulum type, slow twitch skeletal
            muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+)
            ATPase)
          Length = 1042

 Score =  267 bits (682), Expect = 1e-71
 Identities = 133/167 (79%), Positives = 143/167 (85%)
 Frame = +2

Query: 2    HDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 181
            +DAPALKKAEIGIAMGSGTAVAK+ASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI
Sbjct: 705  NDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLI 764

Query: 182  SSNVGEVVSIFLTAALGMPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSTK 361
            SSNVGEVV IFLTAALG PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIM KPPR+ K
Sbjct: 765  SSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPK 824

Query: 362  EPLITGWLFFRYMXXXXXXXXXXXXXXXWWFTIYPRGPQLNYYQLTH 502
            EPLI+GWLFFRY+               WWF     GP++++YQL+H
Sbjct: 825  EPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSH 871
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,218,245
Number of Sequences: 369166
Number of extensions: 1011742
Number of successful extensions: 3318
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3220
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3206272875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)