Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02577
(840 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8TE04|PANK1_HUMAN Pantothenate kinase 1 (Pantothenic ac... 51 5e-06
sp|Q8K4K6|PANK1_MOUSE Pantothenate kinase 1 (Pantothenic ac... 51 5e-06
sp|Q9BZ23|PANK2_HUMAN Pantothenate kinase 2, mitochondrial ... 47 5e-05
sp|Q9H999|PANK3_HUMAN Pantothenate kinase 3 (Pantothenic ac... 45 2e-04
sp|Q8R2W9|PANK3_MOUSE Pantothenate kinase 3 (Pantothenic ac... 45 3e-04
sp|O80765|PANK1_ARATH Pantothenate kinase 1 (Pantothenic ac... 44 7e-04
sp|Q8L5Y9|PANK2_ARATH Pantothenate kinase 2 (Pantothenic ac... 44 7e-04
sp|Q9NVE7|PANK4_HUMAN Pantothenate kinase 4 (Pantothenic ac... 42 0.002
sp|Q923S8|PANK4_RAT Pantothenate kinase 4 (Pantothenic acid... 42 0.003
sp|P40223|CSF3R_MOUSE Granulocyte colony-stimulating factor... 31 3.7
>sp|Q8TE04|PANK1_HUMAN Pantothenate kinase 1 (Pantothenic acid kinase 1) (hPanK1) (hPanK)
Length = 598
Score = 50.8 bits (120), Expect = 5e-06
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +1
Query: 544 PCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAARGDR 723
P + MGS + + G GG TF+GLC L G + E + MAA+GD
Sbjct: 409 PMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAKGDS 468
Query: 724 RNIDSQLKDFVDENY 768
N+D +KD +Y
Sbjct: 469 TNVDKLVKDIYGGDY 483
>sp|Q8K4K6|PANK1_MOUSE Pantothenate kinase 1 (Pantothenic acid kinase 1) (mPank1) (mPank)
Length = 548
Score = 50.8 bits (120), Expect = 5e-06
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +1
Query: 544 PCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAARGDR 723
P + MGS + + G GG TF+GLC L G + E + MAA+GD
Sbjct: 359 PMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALDMAAKGDS 418
Query: 724 RNIDSQLKDFVDENY 768
N+D +KD +Y
Sbjct: 419 TNVDKLVKDIYGGDY 433
>sp|Q9BZ23|PANK2_HUMAN Pantothenate kinase 2, mitochondrial precursor (Pantothenic acid
kinase 2) (hPANK2)
Length = 570
Score = 47.4 bits (111), Expect = 5e-05
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +1
Query: 544 PCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAARGDR 723
P + +GS + + G GG TF GLC L G T + E + MA+RGD
Sbjct: 384 PLLLVNIGSGVSILAVYSKDNYKRVTGTSLGGGTFFGLCCLLTGCTTFEEALEMASRGDS 443
Query: 724 RNIDSQLKDFVDENY 768
+D ++D +Y
Sbjct: 444 TKVDKLVRDIYGGDY 458
>sp|Q9H999|PANK3_HUMAN Pantothenate kinase 3 (Pantothenic acid kinase 3) (hPanK3)
Length = 370
Score = 45.1 bits (105), Expect = 2e-04
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +1
Query: 535 DLLPCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAAR 714
D P + +GS + + G GG TF+GLC L G + E + MA++
Sbjct: 181 DPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASK 240
Query: 715 GDRRNIDSQLKDFVDENY 768
GD D ++D +Y
Sbjct: 241 GDSTQADKLVRDIYGGDY 258
>sp|Q8R2W9|PANK3_MOUSE Pantothenate kinase 3 (Pantothenic acid kinase 3) (mPanK3)
Length = 370
Score = 44.7 bits (104), Expect = 3e-04
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +1
Query: 535 DLLPCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAAR 714
D P + +GS + + G GG TF+GLC L G + E + MA++
Sbjct: 181 DPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASK 240
Query: 715 GDRRNIDSQLKDFVDENY 768
GD D ++D +Y
Sbjct: 241 GDSTQADRLVRDIYGGDY 258
>sp|O80765|PANK1_ARATH Pantothenate kinase 1 (Pantothenic acid kinase 1) (AtCoaA)
Length = 383
Score = 43.5 bits (101), Expect = 7e-04
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +1
Query: 535 DLLPCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAAR 714
DL P + +GS + DGK+ +G GG TF+GL + L + E++ ++
Sbjct: 147 DLYPYLLVNIGSGVSMIKVDGDGKYERISGTSLGGGTFLGLGKLLTKCKSFDELLELSHH 206
Query: 715 GDRRNIDSQLKD 750
G+ R ID + D
Sbjct: 207 GNNRVIDMLVGD 218
>sp|Q8L5Y9|PANK2_ARATH Pantothenate kinase 2 (Pantothenic acid kinase 2)
Length = 870
Score = 43.5 bits (101), Expect = 7e-04
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 487 EIFEEIVGKQE--KKVTTDLLPCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLC 660
E F + G++E + DL P + +GS + +GKF +G GG T+ GL
Sbjct: 188 EAFTHMEGEKEFVQIDPNDLYPYLLVNVGSGVSIIKVDGEGKFERVSGTNVGGGTYWGLG 247
Query: 661 RCLLGTTDYTEIMSMAARGDRRNIDSQLKD 750
R L + E++ ++ +GD ID + D
Sbjct: 248 RLLTKCKSFDELLELSQKGDNSAIDMLVGD 277
>sp|Q9NVE7|PANK4_HUMAN Pantothenate kinase 4 (Pantothenic acid kinase 4) (hPanK4)
Length = 773
Score = 42.4 bits (98), Expect = 0.002
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +1
Query: 538 LLPCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAARG 717
+ P + +GS + + +F G GG TF GL L T + E++ +A+RG
Sbjct: 186 IFPYLLVNIGSGVSIVKVETEDRFEWVGGSSIGGGTFWGLGALLTKTKKFDELLHLASRG 245
Query: 718 DRRNIDSQLKD 750
N+D ++D
Sbjct: 246 QHSNVDMLVRD 256
>sp|Q923S8|PANK4_RAT Pantothenate kinase 4 (Pantothenic acid kinase 4) (rPanK4)
Length = 773
Score = 41.6 bits (96), Expect = 0.003
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +1
Query: 535 DLLPCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAAR 714
++ P + +GS + + +F G GG TF GL L T + E++ +A+R
Sbjct: 185 NIFPYLLVNIGSGVSIVKVETEDRFEWIGGSSIGGGTFWGLGALLTKTKKFDELLQLASR 244
Query: 715 GDRRNIDSQLKD 750
G N+D ++D
Sbjct: 245 GRHANVDMLVQD 256
>sp|P40223|CSF3R_MOUSE Granulocyte colony-stimulating factor receptor precursor (G-CSF-R)
Length = 837
Score = 31.2 bits (69), Expect = 3.7
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 14/64 (21%)
Frame = +2
Query: 566 EAHVALLILELTENFQWLLVQWQEGKHLLDFVDV--------------FWELQTTLKLCQ 703
E+ + L L T+ F + LV W++ LLD ++ L T +CQ
Sbjct: 85 ESLITLPHLNYTQAFLFCLVPWEDSVQLLDQAELHAGYPPASPSNLSCLMHLTTNSLVCQ 144
Query: 704 WQPG 715
W+PG
Sbjct: 145 WEPG 148
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,330,727
Number of Sequences: 369166
Number of extensions: 1634209
Number of successful extensions: 4265
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4263
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8197207050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)