Planaria EST Database


DrC_02577

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02577
         (840 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8TE04|PANK1_HUMAN  Pantothenate kinase 1 (Pantothenic ac...    51   5e-06
sp|Q8K4K6|PANK1_MOUSE  Pantothenate kinase 1 (Pantothenic ac...    51   5e-06
sp|Q9BZ23|PANK2_HUMAN  Pantothenate kinase 2, mitochondrial ...    47   5e-05
sp|Q9H999|PANK3_HUMAN  Pantothenate kinase 3 (Pantothenic ac...    45   2e-04
sp|Q8R2W9|PANK3_MOUSE  Pantothenate kinase 3 (Pantothenic ac...    45   3e-04
sp|O80765|PANK1_ARATH  Pantothenate kinase 1 (Pantothenic ac...    44   7e-04
sp|Q8L5Y9|PANK2_ARATH  Pantothenate kinase 2 (Pantothenic ac...    44   7e-04
sp|Q9NVE7|PANK4_HUMAN  Pantothenate kinase 4 (Pantothenic ac...    42   0.002
sp|Q923S8|PANK4_RAT  Pantothenate kinase 4 (Pantothenic acid...    42   0.003
sp|P40223|CSF3R_MOUSE  Granulocyte colony-stimulating factor...    31   3.7  
>sp|Q8TE04|PANK1_HUMAN Pantothenate kinase 1 (Pantothenic acid kinase 1) (hPanK1) (hPanK)
          Length = 598

 Score = 50.8 bits (120), Expect = 5e-06
 Identities = 25/75 (33%), Positives = 35/75 (46%)
 Frame = +1

Query: 544 PCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAARGDR 723
           P +   MGS      +     +    G   GG TF+GLC  L G   + E + MAA+GD 
Sbjct: 409 PMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAKGDS 468

Query: 724 RNIDSQLKDFVDENY 768
            N+D  +KD    +Y
Sbjct: 469 TNVDKLVKDIYGGDY 483
>sp|Q8K4K6|PANK1_MOUSE Pantothenate kinase 1 (Pantothenic acid kinase 1) (mPank1) (mPank)
          Length = 548

 Score = 50.8 bits (120), Expect = 5e-06
 Identities = 25/75 (33%), Positives = 35/75 (46%)
 Frame = +1

Query: 544 PCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAARGDR 723
           P +   MGS      +     +    G   GG TF+GLC  L G   + E + MAA+GD 
Sbjct: 359 PMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALDMAAKGDS 418

Query: 724 RNIDSQLKDFVDENY 768
            N+D  +KD    +Y
Sbjct: 419 TNVDKLVKDIYGGDY 433
>sp|Q9BZ23|PANK2_HUMAN Pantothenate kinase 2, mitochondrial precursor (Pantothenic acid
           kinase 2) (hPANK2)
          Length = 570

 Score = 47.4 bits (111), Expect = 5e-05
 Identities = 23/75 (30%), Positives = 34/75 (45%)
 Frame = +1

Query: 544 PCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAARGDR 723
           P +   +GS      +     +    G   GG TF GLC  L G T + E + MA+RGD 
Sbjct: 384 PLLLVNIGSGVSILAVYSKDNYKRVTGTSLGGGTFFGLCCLLTGCTTFEEALEMASRGDS 443

Query: 724 RNIDSQLKDFVDENY 768
             +D  ++D    +Y
Sbjct: 444 TKVDKLVRDIYGGDY 458
>sp|Q9H999|PANK3_HUMAN Pantothenate kinase 3 (Pantothenic acid kinase 3) (hPanK3)
          Length = 370

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 22/78 (28%), Positives = 34/78 (43%)
 Frame = +1

Query: 535 DLLPCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAAR 714
           D  P +   +GS      +     +    G   GG TF+GLC  L G   + E + MA++
Sbjct: 181 DPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASK 240

Query: 715 GDRRNIDSQLKDFVDENY 768
           GD    D  ++D    +Y
Sbjct: 241 GDSTQADKLVRDIYGGDY 258
>sp|Q8R2W9|PANK3_MOUSE Pantothenate kinase 3 (Pantothenic acid kinase 3) (mPanK3)
          Length = 370

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 22/78 (28%), Positives = 34/78 (43%)
 Frame = +1

Query: 535 DLLPCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAAR 714
           D  P +   +GS      +     +    G   GG TF+GLC  L G   + E + MA++
Sbjct: 181 DPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASK 240

Query: 715 GDRRNIDSQLKDFVDENY 768
           GD    D  ++D    +Y
Sbjct: 241 GDSTQADRLVRDIYGGDY 258
>sp|O80765|PANK1_ARATH Pantothenate kinase 1 (Pantothenic acid kinase 1) (AtCoaA)
          Length = 383

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 22/72 (30%), Positives = 36/72 (50%)
 Frame = +1

Query: 535 DLLPCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAAR 714
           DL P +   +GS      +  DGK+   +G   GG TF+GL + L     + E++ ++  
Sbjct: 147 DLYPYLLVNIGSGVSMIKVDGDGKYERISGTSLGGGTFLGLGKLLTKCKSFDELLELSHH 206

Query: 715 GDRRNIDSQLKD 750
           G+ R ID  + D
Sbjct: 207 GNNRVIDMLVGD 218
>sp|Q8L5Y9|PANK2_ARATH Pantothenate kinase 2 (Pantothenic acid kinase 2)
          Length = 870

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
 Frame = +1

Query: 487 EIFEEIVGKQE--KKVTTDLLPCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLC 660
           E F  + G++E  +    DL P +   +GS      +  +GKF   +G   GG T+ GL 
Sbjct: 188 EAFTHMEGEKEFVQIDPNDLYPYLLVNVGSGVSIIKVDGEGKFERVSGTNVGGGTYWGLG 247

Query: 661 RCLLGTTDYTEIMSMAARGDRRNIDSQLKD 750
           R L     + E++ ++ +GD   ID  + D
Sbjct: 248 RLLTKCKSFDELLELSQKGDNSAIDMLVGD 277
>sp|Q9NVE7|PANK4_HUMAN Pantothenate kinase 4 (Pantothenic acid kinase 4) (hPanK4)
          Length = 773

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +1

Query: 538 LLPCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAARG 717
           + P +   +GS      +  + +F    G   GG TF GL   L  T  + E++ +A+RG
Sbjct: 186 IFPYLLVNIGSGVSIVKVETEDRFEWVGGSSIGGGTFWGLGALLTKTKKFDELLHLASRG 245

Query: 718 DRRNIDSQLKD 750
              N+D  ++D
Sbjct: 246 QHSNVDMLVRD 256
>sp|Q923S8|PANK4_RAT Pantothenate kinase 4 (Pantothenic acid kinase 4) (rPanK4)
          Length = 773

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 20/72 (27%), Positives = 35/72 (48%)
 Frame = +1

Query: 535 DLLPCIFGFMGSACGFTYIGVDGKFSMAAGPMAGGKTFIGLCRCLLGTTDYTEIMSMAAR 714
           ++ P +   +GS      +  + +F    G   GG TF GL   L  T  + E++ +A+R
Sbjct: 185 NIFPYLLVNIGSGVSIVKVETEDRFEWIGGSSIGGGTFWGLGALLTKTKKFDELLQLASR 244

Query: 715 GDRRNIDSQLKD 750
           G   N+D  ++D
Sbjct: 245 GRHANVDMLVQD 256
>sp|P40223|CSF3R_MOUSE Granulocyte colony-stimulating factor receptor precursor (G-CSF-R)
          Length = 837

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 14/64 (21%)
 Frame = +2

Query: 566 EAHVALLILELTENFQWLLVQWQEGKHLLDFVDV--------------FWELQTTLKLCQ 703
           E+ + L  L  T+ F + LV W++   LLD  ++                 L T   +CQ
Sbjct: 85  ESLITLPHLNYTQAFLFCLVPWEDSVQLLDQAELHAGYPPASPSNLSCLMHLTTNSLVCQ 144

Query: 704 WQPG 715
           W+PG
Sbjct: 145 WEPG 148
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,330,727
Number of Sequences: 369166
Number of extensions: 1634209
Number of successful extensions: 4265
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4263
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8197207050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)