Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02528
(866 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q29551|SCOT_PIG Succinyl-CoA:3-ketoacid-coenzyme A trans... 323 3e-88
sp|P55809|SCOT_HUMAN Succinyl-CoA:3-ketoacid-coenzyme A tra... 322 1e-87
sp|Q9D0K2|SCOT_MOUSE Succinyl-CoA:3-ketoacid-coenzyme A tra... 321 1e-87
sp|Q9BYC2|SCOT2_HUMAN Succinyl-CoA:3-ketoacid-coenzyme A tr... 298 1e-80
sp|Q09450|SCOT_CAEEL Probable succinyl-CoA:3-ketoacid-coenz... 289 8e-78
sp|O34264|SCOA_XANCP Succinyl-CoA:3-ketoacid-coenzyme A tra... 256 4e-68
sp|P63649|SCOA_MYCBO Probable succinyl-CoA:3-ketoacid-coenz... 251 2e-66
sp|P42315|SCOA_BACSU Probable succinyl-CoA:3-ketoacid-coenz... 251 2e-66
sp|Q9ZLE3|SCOA_HELPJ Succinyl-CoA:3-ketoacid-coenzyme A tra... 247 3e-65
sp|P56006|SCOA_HELPY Succinyl-CoA:3-ketoacid-coenzyme A tra... 244 2e-64
>sp|Q29551|SCOT_PIG Succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial
precursor (Somatic-type succinyl CoA:3-oxoacid
CoA-transferase) (Scot-S)
Length = 520
Score = 323 bits (829), Expect = 3e-88
Identities = 160/265 (60%), Positives = 205/265 (77%), Gaps = 1/265 (0%)
Frame = +3
Query: 72 KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
K YT+A +AVKDI N T+LVGGFG+CGIPENLI A+ K V LT VSNNAGV +FGLG
Sbjct: 41 KFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLG 100
Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
+LL S+Q+KRMISSYVGEN+EF RQYL GELEVE PQGTLAERIRAGGAG+PAF+T T
Sbjct: 101 LLLQSKQIKRMISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTG 160
Query: 432 HGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAGN 611
+GTL+Q GG+PIKY+ G + + S+P+E R +G+ ++LE AI+G+FAL+KAWKAD+AGN
Sbjct: 161 YGTLVQEGGSPIKYNKDGSIAIASKpreVREFNGQHFILEEAIRGDFALVKAWKADQAGN 220
Query: 612 LIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRIE 791
+ FRKSARNFN PMCKAA+ T+ DIG P++IH+P I+V ++V EK+EKRIE
Sbjct: 221 VTFRKSARNFNLPMCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIE 280
Query: 792 KKTLLTQSSNVETNEAKI-KRARER 863
+ + + + +V+T K+ RER
Sbjct: 281 RLS-VRKEEDVKTRSGKLGDNVRER 304
>sp|P55809|SCOT_HUMAN Succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial
precursor (Somatic-type succinyl CoA:3-oxoacid
CoA-transferase) (Scot-S)
Length = 520
Score = 322 bits (824), Expect = 1e-87
Identities = 157/264 (59%), Positives = 202/264 (76%)
Frame = +3
Query: 51 SSINYFKKIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAG 230
+S + K YT+ +AVKDI + T+LVGGFG+CGIPENLI A+ K V LT VSNNAG
Sbjct: 34 TSAHRHTKFYTDPVEAVKDIPDGATVLVGGFGLCGIPENLIDALLKTGVKGLTAVSNNAG 93
Query: 231 VTDFGLGILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIP 410
V +FGLG+LL S+Q+KRM+SSYVGEN+EF RQYL GELEVE PQGTLAERIRAGGAG+P
Sbjct: 94 VDNFGLGLLLRSKQIKRMVSSYVGENAEFERQYLSGELEVELTPQGTLAERIRAGGAGVP 153
Query: 411 AFFTPTAHGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAW 590
AF+TPT +GTL+Q GG+PIKY+ G V + S+P+E R +G+ ++LE AI G+FAL+KAW
Sbjct: 154 AFYTPTGYGTLVQEGGSPIKYNKDGSVAIASKpreVREFNGQHFILEEAITGDFALVKAW 213
Query: 591 KADKAGNLIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCE 770
KAD+AGN+IFRKSARNFN PMCKAA+ T+ DIG P++IH+P I+V +++ E
Sbjct: 214 KADRAGNVIFRKSARNFNLPMCKAAETTVVEVEEIVDIGAFAPEDIHIPQIYVHRLIKGE 273
Query: 771 KFEKRIEKKTLLTQSSNVETNEAK 842
K+EKRIE+ ++ + E AK
Sbjct: 274 KYEKRIERLSIRKEGDG-EAKSAK 296
>sp|Q9D0K2|SCOT_MOUSE Succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial
precursor (Somatic-type succinyl CoA:3-oxoacid
CoA-transferase) (Scot-S)
Length = 520
Score = 321 bits (823), Expect = 1e-87
Identities = 156/250 (62%), Positives = 196/250 (78%)
Frame = +3
Query: 54 SINYFKKIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGV 233
S + K YT+ +AVKDI N TLLVGGFG+CGIPENLI A+ K V +LT VSNNAGV
Sbjct: 35 STRHHTKFYTDPVEAVKDIPNGATLLVGGFGLCGIPENLIGALLKTGVKDLTAVSNNAGV 94
Query: 234 TDFGLGILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPA 413
+FGLG+LL S+Q+KRMISSYVGEN+EF RQ+L GELEVE PQGTLAERIRAGGAG+PA
Sbjct: 95 DNFGLGLLLRSKQIKRMISSYVGENAEFERQFLSGELEVELTPQGTLAERIRAGGAGVPA 154
Query: 414 FFTPTAHGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWK 593
F+T T +GTL+Q GG+PIKY+ G V + S+P+E R +G+ ++LE AI G+FAL+KAWK
Sbjct: 155 FYTSTGYGTLVQEGGSPIKYNKDGSVAIASKpreVREFNGQHFILEEAITGDFALVKAWK 214
Query: 594 ADKAGNLIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEK 773
AD+AGN+IFRKSARNFN PMCKAA T+ DIG P++IH+P I+V +++ EK
Sbjct: 215 ADRAGNVIFRKSARNFNLPMCKAAGTTVVEVEEIVDIGSFAPEDIHIPKIYVHRLIKGEK 274
Query: 774 FEKRIEKKTL 803
+EKRIE+ +L
Sbjct: 275 YEKRIERLSL 284
>sp|Q9BYC2|SCOT2_HUMAN Succinyl-CoA:3-ketoacid-coenzyme A transferase 2, mitochondrial
precursor (Testis-specific succinyl CoA:3-oxoacid
CoA-transferase) (SCOT-t)
Length = 517
Score = 298 bits (763), Expect = 1e-80
Identities = 139/247 (56%), Positives = 190/247 (76%)
Frame = +3
Query: 72 KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
K Y + + VKDI + T+++GGFG+CGIPENLI+A+ + +V +L VVS+N GV DFGLG
Sbjct: 41 KFYADPVEMVKDISDGATVMIGGFGLCGIPENLIAALLRTRVKDLQVVSSNVGVEDFGLG 100
Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
+LL +RQV+R++ SYVGEN+ QYL GELE+E PQGTLAERIRAGGAG+PAF+TPT
Sbjct: 101 LLLAARQVRRIVCSYVGENTLCESQYLAGELELELTPQGTLAERIRAGGAGVPAFYTPTG 160
Query: 432 HGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAGN 611
+GTL+Q GG PI+Y G + L S+P+E R +G ++LE AI+ +FAL+K WKAD+AGN
Sbjct: 161 YGTLVQEGGAPIRYTPDGHLALMSQpreVREFNGDHFLLERAIRADFALVKGWKADRAGN 220
Query: 612 LIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRIE 791
++FR+SARNFN PMCKAADVT ++G P++IHVP I+VD+++ +K+EKRIE
Sbjct: 221 VVFRRSARNFNVPMCKAADVTAVEVEEIVEVGAFPPEDIHVPNIYVDRVIKGQKYEKRIE 280
Query: 792 KKTLLTQ 812
+ T+L +
Sbjct: 281 RLTILKE 287
>sp|Q09450|SCOT_CAEEL Probable succinyl-CoA:3-ketoacid-coenzyme A transferase,
mitochondrial precursor (3-oxoacid CoA-transferase)
Length = 521
Score = 289 bits (739), Expect = 8e-78
Identities = 143/243 (58%), Positives = 184/243 (75%), Gaps = 2/243 (0%)
Frame = +3
Query: 72 KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
K++ +AE+AVKDI +N LLVGGFG+CGIPENLI A+ K LT VSNNAGV ++GLG
Sbjct: 38 KVFNSAEEAVKDIPDNAKLLVGGFGLCGIPENLIQAITKTGQKGLTCVSNNAGVDNWGLG 97
Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
+LL +RQ+K+MISSYVGEN EFARQYL GELE+EF PQGTLAERIRA GAG+PAF+TPT
Sbjct: 98 LLLQTRQIKKMISSYVGENGEFARQYLSGELELEFTPQGTLAERIRAAGAGVPAFYTPTG 157
Query: 432 HGTLIQIGGTPIKYD--TKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKA 605
+GT IQ GG PIKY KG++ + S+ KE+R +G YV+E AI G+FALIKAW+AD
Sbjct: 158 YGTQIQEGGAPIKYSKTEKGKIEVASKAKETRQFNGINYVMEEAIWGDFALIKAWRADTL 217
Query: 606 GNLIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKR 785
GN+ FR +A NFN PMCKA+ TI + G I P+++H+P I+ ++VL + ++K
Sbjct: 218 GNIQFRHAAGNFNNPMCKASKCTIVEVEEIVEPGVIAPNDVHIPSIYCHRLVLGKNYKKP 277
Query: 786 IEK 794
IE+
Sbjct: 278 IER 280
>sp|O34264|SCOA_XANCP Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (Succinyl
CoA:3-oxoacid CoA-transferase) (OXCT A)
Length = 242
Score = 256 bits (655), Expect = 4e-68
Identities = 133/245 (54%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
Frame = +3
Query: 72 KIYTNAEDAVKDI-KNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGL 248
K Y +A+ A+ + + TL VGGFG+CGIPE LI+A+ V LTV+SNNAGV FGL
Sbjct: 11 KRYADAKAALAGVVADGQTLAVGGFGLCGIPEALIAALRDSAVSGLTVISNNAGVDGFGL 70
Query: 249 GILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPT 428
G LL +RQ+++MISSYVGEN EF RQYL GELE+EF PQGTLAER+RAGGAGIPAF+T T
Sbjct: 71 GQLLATRQIRKMISSYVGENKEFERQYLAGELELEFNPQGTLAERLRAGGAGIPAFYTAT 130
Query: 429 AHGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAG 608
+GT++ G KE+R DG+ YVLETA++ + ALIKAW+AD AG
Sbjct: 131 GYGTIVAYG------------------KETREFDGKHYVLETALQADVALIKAWRADTAG 172
Query: 609 NLIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRI 788
NL+FRK+ARNFN A V I ++G IDPD +H+PGI++D++VL EKRI
Sbjct: 173 NLVFRKTARNFNPACAMAGRVCIAEVEEIVELGAIDPDQVHLPGIYIDRLVLNATPEKRI 232
Query: 789 EKKTL 803
E++T+
Sbjct: 233 EQRTV 237
>sp|P63649|SCOA_MYCBO Probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
(Succinyl CoA:3-oxoacid CoA-transferase) (OXCT A)
sp|P63648|SCOA_MYCTU Probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
(Succinyl CoA:3-oxoacid CoA-transferase) (OXCT A)
Length = 248
Score = 251 bits (640), Expect = 2e-66
Identities = 123/244 (50%), Positives = 164/244 (67%)
Frame = +3
Query: 72 KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
K+ A +AV DI N ++L VGGFG+CGIPE LI+A+ V +L VSNN G+ GLG
Sbjct: 3 KVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVGLG 62
Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
+LL ++++R +SSYVGEN EFARQ+L GELEVE PQGTLAER+RAGG GIPAF+TP
Sbjct: 63 LLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTPAG 122
Query: 432 HGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAGN 611
GT + GG P +YD G V + S KE+R DG YVLE I+ +FAL+ AW+ D+ GN
Sbjct: 123 VGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRHGN 182
Query: 612 LIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRIE 791
L++R +A NFN A +TI + G+IDP +H PG+FV ++V K+IE
Sbjct: 183 LMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKKIE 242
Query: 792 KKTL 803
++T+
Sbjct: 243 RETV 246
>sp|P42315|SCOA_BACSU Probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
(Succinyl CoA:3-oxoacid CoA-transferase) (OXCT A)
Length = 238
Score = 251 bits (640), Expect = 2e-66
Identities = 131/252 (51%), Positives = 169/252 (67%)
Frame = +3
Query: 72 KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
K+ +++++A K I + +TL+ GGFG+CGIPE LI ++ + V +LTVVSNN GV D+GLG
Sbjct: 3 KVLSSSKEAAKLIHDGDTLIAGGFGLCGIPEQLILSIRDQGVKDLTVVSNNCGVDDWGLG 62
Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
+LL ++Q+K+MI+SYVGEN F RQ+L GELEVE VPQGTLAERIRAGGAGIP F+T T
Sbjct: 63 LLLANKQIKKMIASYVGENKIFERQFLSGELEVELVPQGTLAERIRAGGAGIPGFYTATG 122
Query: 432 HGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAGN 611
GT I +E KE + GR YVLE I G+ A++KAWKAD GN
Sbjct: 123 VGTSI------------------AEGKEHKTFGGRTYVLERGITGDVAIVKAWKADTMGN 164
Query: 612 LIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRIE 791
LIFRK+ARNFN A +TI + G++DPD+IH PGI+V +VL EKRIE
Sbjct: 165 LIFRKTARNFNPIAAMAGKITIAEAEEIVEAGELDPDHIHTPGIYVQHVVLGASQEKRIE 224
Query: 792 KKTLLTQSSNVE 827
K+T+ S E
Sbjct: 225 KRTVQQASGKGE 236
>sp|Q9ZLE3|SCOA_HELPJ Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (Succinyl
CoA:3-oxoacid CoA-transferase) (OXCT A)
Length = 232
Score = 247 bits (631), Expect = 3e-65
Identities = 127/243 (52%), Positives = 164/243 (67%)
Frame = +3
Query: 72 KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
K+ T+ + A+ +K+ +T+LVGGFG+CGIPE I + KK + +L VVSNN GV DFGLG
Sbjct: 3 KVITDLDKALSGLKDGDTILVGGFGLCGIPEYAIDYIYKKGIKDLIVVSNNCGVDDFGLG 62
Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
ILL +Q+K++I+SYVGEN F Q L+GE+EV PQGTLAE +RAGGAGIPA++TPT
Sbjct: 63 ILLEKKQIKKIIASYVGENKIFESQMLNGEIEVVLTPQGTLAENLRAGGAGIPAYYTPTG 122
Query: 432 HGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAGN 611
GTLI G KESR +G+EY+LE AI G++ LIKA+K+D GN
Sbjct: 123 VGTLIAQG------------------KESREFNGKEYILERAITGDYGLIKAYKSDTLGN 164
Query: 612 LIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRIE 791
L+FRK+ARNFN AA + + G++DPD IH+PGI+V I EKFEKRIE
Sbjct: 165 LVFRKTARNFNPLCAMAAKICVAEVEEIVPAGELDPDEIHLPGIYVQHIYKGEKFEKRIE 224
Query: 792 KKT 800
K T
Sbjct: 225 KTT 227
>sp|P56006|SCOA_HELPY Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (Succinyl
CoA:3-oxoacid CoA-transferase) (OXCT A)
Length = 232
Score = 244 bits (623), Expect = 2e-64
Identities = 126/243 (51%), Positives = 163/243 (67%)
Frame = +3
Query: 72 KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
K+ T+ + A+ +K+ +T+LVGGFG+CGIPE I + KK + +L VVSNN GV DFGLG
Sbjct: 3 KVITDLDKALSALKDGDTILVGGFGLCGIPEYAIDYIYKKGIKDLIVVSNNCGVDDFGLG 62
Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
ILL +Q+K++I+SYVGEN F Q L+GE+EV PQGTLAE + AGGAGIPA++TPT
Sbjct: 63 ILLEKKQIKKIIASYVGENKIFESQMLNGEIEVVLTPQGTLAENLHAGGAGIPAYYTPTG 122
Query: 432 HGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAGN 611
GTLI G KESR +G+EY+LE AI G++ LIKA+K+D GN
Sbjct: 123 VGTLIAQG------------------KESREFNGKEYILERAITGDYGLIKAYKSDTLGN 164
Query: 612 LIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRIE 791
L+FRK+ARNFN AA + + G++DPD IH+PGI+V I EKFEKRIE
Sbjct: 165 LVFRKTARNFNPLCAMAAKICVAEVEEIVPAGELDPDEIHLPGIYVQHIYKGEKFEKRIE 224
Query: 792 KKT 800
K T
Sbjct: 225 KIT 227
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,244,922
Number of Sequences: 369166
Number of extensions: 1775231
Number of successful extensions: 5497
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5482
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8550075140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)