Planaria EST Database


DrC_02528

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02528
         (866 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q29551|SCOT_PIG  Succinyl-CoA:3-ketoacid-coenzyme A trans...   323   3e-88
sp|P55809|SCOT_HUMAN  Succinyl-CoA:3-ketoacid-coenzyme A tra...   322   1e-87
sp|Q9D0K2|SCOT_MOUSE  Succinyl-CoA:3-ketoacid-coenzyme A tra...   321   1e-87
sp|Q9BYC2|SCOT2_HUMAN  Succinyl-CoA:3-ketoacid-coenzyme A tr...   298   1e-80
sp|Q09450|SCOT_CAEEL  Probable succinyl-CoA:3-ketoacid-coenz...   289   8e-78
sp|O34264|SCOA_XANCP  Succinyl-CoA:3-ketoacid-coenzyme A tra...   256   4e-68
sp|P63649|SCOA_MYCBO  Probable succinyl-CoA:3-ketoacid-coenz...   251   2e-66
sp|P42315|SCOA_BACSU  Probable succinyl-CoA:3-ketoacid-coenz...   251   2e-66
sp|Q9ZLE3|SCOA_HELPJ  Succinyl-CoA:3-ketoacid-coenzyme A tra...   247   3e-65
sp|P56006|SCOA_HELPY  Succinyl-CoA:3-ketoacid-coenzyme A tra...   244   2e-64
>sp|Q29551|SCOT_PIG Succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial
           precursor (Somatic-type succinyl CoA:3-oxoacid
           CoA-transferase) (Scot-S)
          Length = 520

 Score =  323 bits (829), Expect = 3e-88
 Identities = 160/265 (60%), Positives = 205/265 (77%), Gaps = 1/265 (0%)
 Frame = +3

Query: 72  KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
           K YT+A +AVKDI N  T+LVGGFG+CGIPENLI A+ K  V  LT VSNNAGV +FGLG
Sbjct: 41  KFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLG 100

Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
           +LL S+Q+KRMISSYVGEN+EF RQYL GELEVE  PQGTLAERIRAGGAG+PAF+T T 
Sbjct: 101 LLLQSKQIKRMISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTG 160

Query: 432 HGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAGN 611
           +GTL+Q GG+PIKY+  G + + S+P+E R  +G+ ++LE AI+G+FAL+KAWKAD+AGN
Sbjct: 161 YGTLVQEGGSPIKYNKDGSIAIASKpreVREFNGQHFILEEAIRGDFALVKAWKADQAGN 220

Query: 612 LIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRIE 791
           + FRKSARNFN PMCKAA+ T+       DIG   P++IH+P I+V ++V  EK+EKRIE
Sbjct: 221 VTFRKSARNFNLPMCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIE 280

Query: 792 KKTLLTQSSNVETNEAKI-KRARER 863
           + + + +  +V+T   K+    RER
Sbjct: 281 RLS-VRKEEDVKTRSGKLGDNVRER 304
>sp|P55809|SCOT_HUMAN Succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial
           precursor (Somatic-type succinyl CoA:3-oxoacid
           CoA-transferase) (Scot-S)
          Length = 520

 Score =  322 bits (824), Expect = 1e-87
 Identities = 157/264 (59%), Positives = 202/264 (76%)
 Frame = +3

Query: 51  SSINYFKKIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAG 230
           +S +   K YT+  +AVKDI +  T+LVGGFG+CGIPENLI A+ K  V  LT VSNNAG
Sbjct: 34  TSAHRHTKFYTDPVEAVKDIPDGATVLVGGFGLCGIPENLIDALLKTGVKGLTAVSNNAG 93

Query: 231 VTDFGLGILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIP 410
           V +FGLG+LL S+Q+KRM+SSYVGEN+EF RQYL GELEVE  PQGTLAERIRAGGAG+P
Sbjct: 94  VDNFGLGLLLRSKQIKRMVSSYVGENAEFERQYLSGELEVELTPQGTLAERIRAGGAGVP 153

Query: 411 AFFTPTAHGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAW 590
           AF+TPT +GTL+Q GG+PIKY+  G V + S+P+E R  +G+ ++LE AI G+FAL+KAW
Sbjct: 154 AFYTPTGYGTLVQEGGSPIKYNKDGSVAIASKpreVREFNGQHFILEEAITGDFALVKAW 213

Query: 591 KADKAGNLIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCE 770
           KAD+AGN+IFRKSARNFN PMCKAA+ T+       DIG   P++IH+P I+V +++  E
Sbjct: 214 KADRAGNVIFRKSARNFNLPMCKAAETTVVEVEEIVDIGAFAPEDIHIPQIYVHRLIKGE 273

Query: 771 KFEKRIEKKTLLTQSSNVETNEAK 842
           K+EKRIE+ ++  +    E   AK
Sbjct: 274 KYEKRIERLSIRKEGDG-EAKSAK 296
>sp|Q9D0K2|SCOT_MOUSE Succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial
           precursor (Somatic-type succinyl CoA:3-oxoacid
           CoA-transferase) (Scot-S)
          Length = 520

 Score =  321 bits (823), Expect = 1e-87
 Identities = 156/250 (62%), Positives = 196/250 (78%)
 Frame = +3

Query: 54  SINYFKKIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGV 233
           S  +  K YT+  +AVKDI N  TLLVGGFG+CGIPENLI A+ K  V +LT VSNNAGV
Sbjct: 35  STRHHTKFYTDPVEAVKDIPNGATLLVGGFGLCGIPENLIGALLKTGVKDLTAVSNNAGV 94

Query: 234 TDFGLGILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPA 413
            +FGLG+LL S+Q+KRMISSYVGEN+EF RQ+L GELEVE  PQGTLAERIRAGGAG+PA
Sbjct: 95  DNFGLGLLLRSKQIKRMISSYVGENAEFERQFLSGELEVELTPQGTLAERIRAGGAGVPA 154

Query: 414 FFTPTAHGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWK 593
           F+T T +GTL+Q GG+PIKY+  G V + S+P+E R  +G+ ++LE AI G+FAL+KAWK
Sbjct: 155 FYTSTGYGTLVQEGGSPIKYNKDGSVAIASKpreVREFNGQHFILEEAITGDFALVKAWK 214

Query: 594 ADKAGNLIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEK 773
           AD+AGN+IFRKSARNFN PMCKAA  T+       DIG   P++IH+P I+V +++  EK
Sbjct: 215 ADRAGNVIFRKSARNFNLPMCKAAGTTVVEVEEIVDIGSFAPEDIHIPKIYVHRLIKGEK 274

Query: 774 FEKRIEKKTL 803
           +EKRIE+ +L
Sbjct: 275 YEKRIERLSL 284
>sp|Q9BYC2|SCOT2_HUMAN Succinyl-CoA:3-ketoacid-coenzyme A transferase 2, mitochondrial
           precursor (Testis-specific succinyl CoA:3-oxoacid
           CoA-transferase) (SCOT-t)
          Length = 517

 Score =  298 bits (763), Expect = 1e-80
 Identities = 139/247 (56%), Positives = 190/247 (76%)
 Frame = +3

Query: 72  KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
           K Y +  + VKDI +  T+++GGFG+CGIPENLI+A+ + +V +L VVS+N GV DFGLG
Sbjct: 41  KFYADPVEMVKDISDGATVMIGGFGLCGIPENLIAALLRTRVKDLQVVSSNVGVEDFGLG 100

Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
           +LL +RQV+R++ SYVGEN+    QYL GELE+E  PQGTLAERIRAGGAG+PAF+TPT 
Sbjct: 101 LLLAARQVRRIVCSYVGENTLCESQYLAGELELELTPQGTLAERIRAGGAGVPAFYTPTG 160

Query: 432 HGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAGN 611
           +GTL+Q GG PI+Y   G + L S+P+E R  +G  ++LE AI+ +FAL+K WKAD+AGN
Sbjct: 161 YGTLVQEGGAPIRYTPDGHLALMSQpreVREFNGDHFLLERAIRADFALVKGWKADRAGN 220

Query: 612 LIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRIE 791
           ++FR+SARNFN PMCKAADVT        ++G   P++IHVP I+VD+++  +K+EKRIE
Sbjct: 221 VVFRRSARNFNVPMCKAADVTAVEVEEIVEVGAFPPEDIHVPNIYVDRVIKGQKYEKRIE 280

Query: 792 KKTLLTQ 812
           + T+L +
Sbjct: 281 RLTILKE 287
>sp|Q09450|SCOT_CAEEL Probable succinyl-CoA:3-ketoacid-coenzyme A transferase,
           mitochondrial precursor (3-oxoacid CoA-transferase)
          Length = 521

 Score =  289 bits (739), Expect = 8e-78
 Identities = 143/243 (58%), Positives = 184/243 (75%), Gaps = 2/243 (0%)
 Frame = +3

Query: 72  KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
           K++ +AE+AVKDI +N  LLVGGFG+CGIPENLI A+ K     LT VSNNAGV ++GLG
Sbjct: 38  KVFNSAEEAVKDIPDNAKLLVGGFGLCGIPENLIQAITKTGQKGLTCVSNNAGVDNWGLG 97

Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
           +LL +RQ+K+MISSYVGEN EFARQYL GELE+EF PQGTLAERIRA GAG+PAF+TPT 
Sbjct: 98  LLLQTRQIKKMISSYVGENGEFARQYLSGELELEFTPQGTLAERIRAAGAGVPAFYTPTG 157

Query: 432 HGTLIQIGGTPIKYD--TKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKA 605
           +GT IQ GG PIKY    KG++ + S+ KE+R  +G  YV+E AI G+FALIKAW+AD  
Sbjct: 158 YGTQIQEGGAPIKYSKTEKGKIEVASKAKETRQFNGINYVMEEAIWGDFALIKAWRADTL 217

Query: 606 GNLIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKR 785
           GN+ FR +A NFN PMCKA+  TI       + G I P+++H+P I+  ++VL + ++K 
Sbjct: 218 GNIQFRHAAGNFNNPMCKASKCTIVEVEEIVEPGVIAPNDVHIPSIYCHRLVLGKNYKKP 277

Query: 786 IEK 794
           IE+
Sbjct: 278 IER 280
>sp|O34264|SCOA_XANCP Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (Succinyl
           CoA:3-oxoacid CoA-transferase) (OXCT A)
          Length = 242

 Score =  256 bits (655), Expect = 4e-68
 Identities = 133/245 (54%), Positives = 171/245 (69%), Gaps = 1/245 (0%)
 Frame = +3

Query: 72  KIYTNAEDAVKDI-KNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGL 248
           K Y +A+ A+  +  +  TL VGGFG+CGIPE LI+A+    V  LTV+SNNAGV  FGL
Sbjct: 11  KRYADAKAALAGVVADGQTLAVGGFGLCGIPEALIAALRDSAVSGLTVISNNAGVDGFGL 70

Query: 249 GILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPT 428
           G LL +RQ+++MISSYVGEN EF RQYL GELE+EF PQGTLAER+RAGGAGIPAF+T T
Sbjct: 71  GQLLATRQIRKMISSYVGENKEFERQYLAGELELEFNPQGTLAERLRAGGAGIPAFYTAT 130

Query: 429 AHGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAG 608
            +GT++  G                  KE+R  DG+ YVLETA++ + ALIKAW+AD AG
Sbjct: 131 GYGTIVAYG------------------KETREFDGKHYVLETALQADVALIKAWRADTAG 172

Query: 609 NLIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRI 788
           NL+FRK+ARNFN     A  V I       ++G IDPD +H+PGI++D++VL    EKRI
Sbjct: 173 NLVFRKTARNFNPACAMAGRVCIAEVEEIVELGAIDPDQVHLPGIYIDRLVLNATPEKRI 232

Query: 789 EKKTL 803
           E++T+
Sbjct: 233 EQRTV 237
>sp|P63649|SCOA_MYCBO Probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
           (Succinyl CoA:3-oxoacid CoA-transferase) (OXCT A)
 sp|P63648|SCOA_MYCTU Probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
           (Succinyl CoA:3-oxoacid CoA-transferase) (OXCT A)
          Length = 248

 Score =  251 bits (640), Expect = 2e-66
 Identities = 123/244 (50%), Positives = 164/244 (67%)
 Frame = +3

Query: 72  KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
           K+   A +AV DI N ++L VGGFG+CGIPE LI+A+    V +L  VSNN G+   GLG
Sbjct: 3   KVVATAAEAVADIANGSSLAVGGFGLCGIPEALIAALVDSGVTDLETVSNNCGIDGVGLG 62

Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
           +LL  ++++R +SSYVGEN EFARQ+L GELEVE  PQGTLAER+RAGG GIPAF+TP  
Sbjct: 63  LLLQHKRIRRTVSSYVGENKEFARQFLAGELEVELTPQGTLAERLRAGGMGIPAFYTPAG 122

Query: 432 HGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAGN 611
            GT +  GG P +YD  G V + S  KE+R  DG  YVLE  I+ +FAL+ AW+ D+ GN
Sbjct: 123 VGTQVADGGLPWRYDASGGVAVVSPAKETREFDGVTYVLERGIRTDFALVHAWQGDRHGN 182

Query: 612 LIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRIE 791
           L++R +A NFN     A  +TI       + G+IDP  +H PG+FV ++V      K+IE
Sbjct: 183 LMYRHAAANFNPECASAGRITIAEVEHLVEPGEIDPATVHTPGVFVHRVVHVPNPAKKIE 242

Query: 792 KKTL 803
           ++T+
Sbjct: 243 RETV 246
>sp|P42315|SCOA_BACSU Probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
           (Succinyl CoA:3-oxoacid CoA-transferase) (OXCT A)
          Length = 238

 Score =  251 bits (640), Expect = 2e-66
 Identities = 131/252 (51%), Positives = 169/252 (67%)
 Frame = +3

Query: 72  KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
           K+ +++++A K I + +TL+ GGFG+CGIPE LI ++  + V +LTVVSNN GV D+GLG
Sbjct: 3   KVLSSSKEAAKLIHDGDTLIAGGFGLCGIPEQLILSIRDQGVKDLTVVSNNCGVDDWGLG 62

Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
           +LL ++Q+K+MI+SYVGEN  F RQ+L GELEVE VPQGTLAERIRAGGAGIP F+T T 
Sbjct: 63  LLLANKQIKKMIASYVGENKIFERQFLSGELEVELVPQGTLAERIRAGGAGIPGFYTATG 122

Query: 432 HGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAGN 611
            GT I                  +E KE +   GR YVLE  I G+ A++KAWKAD  GN
Sbjct: 123 VGTSI------------------AEGKEHKTFGGRTYVLERGITGDVAIVKAWKADTMGN 164

Query: 612 LIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRIE 791
           LIFRK+ARNFN     A  +TI       + G++DPD+IH PGI+V  +VL    EKRIE
Sbjct: 165 LIFRKTARNFNPIAAMAGKITIAEAEEIVEAGELDPDHIHTPGIYVQHVVLGASQEKRIE 224

Query: 792 KKTLLTQSSNVE 827
           K+T+   S   E
Sbjct: 225 KRTVQQASGKGE 236
>sp|Q9ZLE3|SCOA_HELPJ Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (Succinyl
           CoA:3-oxoacid CoA-transferase) (OXCT A)
          Length = 232

 Score =  247 bits (631), Expect = 3e-65
 Identities = 127/243 (52%), Positives = 164/243 (67%)
 Frame = +3

Query: 72  KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
           K+ T+ + A+  +K+ +T+LVGGFG+CGIPE  I  + KK + +L VVSNN GV DFGLG
Sbjct: 3   KVITDLDKALSGLKDGDTILVGGFGLCGIPEYAIDYIYKKGIKDLIVVSNNCGVDDFGLG 62

Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
           ILL  +Q+K++I+SYVGEN  F  Q L+GE+EV   PQGTLAE +RAGGAGIPA++TPT 
Sbjct: 63  ILLEKKQIKKIIASYVGENKIFESQMLNGEIEVVLTPQGTLAENLRAGGAGIPAYYTPTG 122

Query: 432 HGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAGN 611
            GTLI  G                  KESR  +G+EY+LE AI G++ LIKA+K+D  GN
Sbjct: 123 VGTLIAQG------------------KESREFNGKEYILERAITGDYGLIKAYKSDTLGN 164

Query: 612 LIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRIE 791
           L+FRK+ARNFN     AA + +         G++DPD IH+PGI+V  I   EKFEKRIE
Sbjct: 165 LVFRKTARNFNPLCAMAAKICVAEVEEIVPAGELDPDEIHLPGIYVQHIYKGEKFEKRIE 224

Query: 792 KKT 800
           K T
Sbjct: 225 KTT 227
>sp|P56006|SCOA_HELPY Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (Succinyl
           CoA:3-oxoacid CoA-transferase) (OXCT A)
          Length = 232

 Score =  244 bits (623), Expect = 2e-64
 Identities = 126/243 (51%), Positives = 163/243 (67%)
 Frame = +3

Query: 72  KIYTNAEDAVKDIKNNNTLLVGGFGICGIPENLISAVNKKKVINLTVVSNNAGVTDFGLG 251
           K+ T+ + A+  +K+ +T+LVGGFG+CGIPE  I  + KK + +L VVSNN GV DFGLG
Sbjct: 3   KVITDLDKALSALKDGDTILVGGFGLCGIPEYAIDYIYKKGIKDLIVVSNNCGVDDFGLG 62

Query: 252 ILLNSRQVKRMISSYVGENSEFARQYLHGELEVEFVPQGTLAERIRAGGAGIPAFFTPTA 431
           ILL  +Q+K++I+SYVGEN  F  Q L+GE+EV   PQGTLAE + AGGAGIPA++TPT 
Sbjct: 63  ILLEKKQIKKIIASYVGENKIFESQMLNGEIEVVLTPQGTLAENLHAGGAGIPAYYTPTG 122

Query: 432 HGTLIQIGGTPIKYDTKGQVLLTSEPKESRIIDGREYVLETAIKGEFALIKAWKADKAGN 611
            GTLI  G                  KESR  +G+EY+LE AI G++ LIKA+K+D  GN
Sbjct: 123 VGTLIAQG------------------KESREFNGKEYILERAITGDYGLIKAYKSDTLGN 164

Query: 612 LIFRKSARNFNEPMCKAADVTIXXXXXXXDIGQIDPDNIHVPGIFVDKIVLCEKFEKRIE 791
           L+FRK+ARNFN     AA + +         G++DPD IH+PGI+V  I   EKFEKRIE
Sbjct: 165 LVFRKTARNFNPLCAMAAKICVAEVEEIVPAGELDPDEIHLPGIYVQHIYKGEKFEKRIE 224

Query: 792 KKT 800
           K T
Sbjct: 225 KIT 227
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,244,922
Number of Sequences: 369166
Number of extensions: 1775231
Number of successful extensions: 5497
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5482
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8550075140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)