Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02498
(861 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P49819|DLDH_CANFA Dihydrolipoyl dehydrogenase, mitochond... 388 e-107
sp|Q60HG3|DLDH_MACFA Dihydrolipoyl dehydrogenase, mitochond... 385 e-107
sp|P09622|DLDH_HUMAN Dihydrolipoyl dehydrogenase, mitochond... 385 e-107
sp|P09623|DLDH_PIG Dihydrolipoyl dehydrogenase, mitochondri... 379 e-105
sp|O08749|DLDH_MOUSE Dihydrolipoyl dehydrogenase, mitochond... 378 e-104
sp|O18480|DLDH_MANSE Dihydrolipoyl dehydrogenase (Dihydroli... 320 3e-87
sp|O00087|DLDH_SCHPO Dihydrolipoyl dehydrogenase, mitochond... 313 5e-85
sp|P09624|DLDH_YEAST Dihydrolipoyl dehydrogenase, mitochond... 281 1e-75
sp|P31023|DLDH_PEA Dihydrolipoyl dehydrogenase, mitochondri... 277 3e-74
sp|P90597|DLDH_TRYCR Dihydrolipoyl dehydrogenase (Dihydroli... 254 2e-67
>sp|P49819|DLDH_CANFA Dihydrolipoyl dehydrogenase, mitochondrial precursor
(Dihydrolipoamide dehydrogenase)
Length = 509
Score = 388 bits (997), Expect = e-107
Identities = 203/285 (71%), Positives = 226/285 (79%), Gaps = 3/285 (1%)
Frame = +3
Query: 15 AFSSGLFRCYSNGQVD--LVVIGSGPGGYVAAIKAAQLGMKTVCVEKNATLGGTCLNVGC 188
A S+ R Y++ +D + VIGSGPGGYVAAIKAAQLG KTVCVEKN TLGGTCLNVGC
Sbjct: 26 AVSAVPLRTYADQPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCVEKNETLGGTCLNVGC 85
Query: 189 IPSKALLNNSHYYHMAKSNELAARGIDCTGVSLNLEKMMNVKSKAVAGLTGGIKMLFKGN 368
IPSKALLNNSHYYHMA + A+RGI+ + V LNLEKMM KS AV LTGGI LFK N
Sbjct: 86 IPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLEKMMEQKSTAVKALTGGIAHLFKQN 145
Query: 369 KVTHMEGVGSITGPNEVTVTNNSGAKEKVSTKNILIASGSEVTPFPGIDIDEETVVSSTG 548
KV H+ G G ITG N+VT G+ + + TKNILIA+GSEVTPFPGI IDE+T+VSSTG
Sbjct: 146 KVVHVNGYGKITGKNQVTAKKADGSTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTG 205
Query: 549 ALSLKKVPEKMVVIGAGVIGVELGSVWSRLGAQVTLVEFLGHVGGMGIDMEISKSIQRIL 728
ALSLKKVPEKMVVIGAGVIGVELGSVW RLGA VT VEFLGHVGG+GIDMEISK+ QRIL
Sbjct: 206 ALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRIL 265
Query: 729 TKQGLNFKLNTKVTGAS-KSGGKVLVNISGTKDDKSETIDCDTLL 860
KQG FKLNTKVTGA+ KS GK+ V+I G K+E I CD LL
Sbjct: 266 QKQGFKFKLNTKVTGATKKSDGKIDVSIEGASGGKAEVITCDVLL 310
>sp|Q60HG3|DLDH_MACFA Dihydrolipoyl dehydrogenase, mitochondrial precursor
(Dihydrolipoamide dehydrogenase)
Length = 509
Score = 385 bits (990), Expect = e-107
Identities = 199/268 (74%), Positives = 217/268 (80%), Gaps = 1/268 (0%)
Frame = +3
Query: 60 DLVVIGSGPGGYVAAIKAAQLGMKTVCVEKNATLGGTCLNVGCIPSKALLNNSHYYHMAK 239
D+ VIGSGPGGYVAAIKAAQLG KTVCVEKN TLGGTCLNVGCIPSKALLNNSHYYHMA
Sbjct: 43 DVTVIGSGPGGYVAAIKAAQLGFKTVCVEKNETLGGTCLNVGCIPSKALLNNSHYYHMAH 102
Query: 240 SNELAARGIDCTGVSLNLEKMMNVKSKAVAGLTGGIKMLFKGNKVTHMEGVGSITGPNEV 419
+ A+RGI+ + V LNL+KMM KS AV LTGGI LFK NKV H+ G G ITG N+V
Sbjct: 103 GKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVIHVNGYGKITGKNQV 162
Query: 420 TVTNNSGAKEKVSTKNILIASGSEVTPFPGIDIDEETVVSSTGALSLKKVPEKMVVIGAG 599
T T G + V TKNILIA+GSEVTPFPGI IDE+T+VSSTGALSLKKVPEKMVVIGAG
Sbjct: 163 TATKVDGGTQVVDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAG 222
Query: 600 VIGVELGSVWSRLGAQVTLVEFLGHVGGMGIDMEISKSIQRILTKQGLNFKLNTKVTGAS 779
VIGVELGSVW RLGA VT VEFLGHVGG+GIDMEISK+ QRIL KQG FKLNTKVTGA+
Sbjct: 223 VIGVELGSVWQRLGADVTAVEFLGHVGGIGIDMEISKNFQRILQKQGFKFKLNTKVTGAT 282
Query: 780 -KSGGKVLVNISGTKDDKSETIDCDTLL 860
KS GK+ V+I K+E I CD LL
Sbjct: 283 KKSDGKIDVSIEAASGGKAEVITCDVLL 310
>sp|P09622|DLDH_HUMAN Dihydrolipoyl dehydrogenase, mitochondrial precursor
(Dihydrolipoamide dehydrogenase) (Glycine cleavage
system L protein)
Length = 509
Score = 385 bits (990), Expect = e-107
Identities = 197/268 (73%), Positives = 217/268 (80%), Gaps = 1/268 (0%)
Frame = +3
Query: 60 DLVVIGSGPGGYVAAIKAAQLGMKTVCVEKNATLGGTCLNVGCIPSKALLNNSHYYHMAK 239
D+ VIGSGPGGYVAAIKAAQLG KTVC+EKN TLGGTCLNVGCIPSKALLNNSHYYHMA
Sbjct: 43 DVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAH 102
Query: 240 SNELAARGIDCTGVSLNLEKMMNVKSKAVAGLTGGIKMLFKGNKVTHMEGVGSITGPNEV 419
+ A+RGI+ + V LNL+KMM KS AV LTGGI LFK NKV H+ G G ITG N+V
Sbjct: 103 GTDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQV 162
Query: 420 TVTNNSGAKEKVSTKNILIASGSEVTPFPGIDIDEETVVSSTGALSLKKVPEKMVVIGAG 599
T T G + + TKNILIA+GSEVTPFPGI IDE+T+VSSTGALSLKKVPEKMVVIGAG
Sbjct: 163 TATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAG 222
Query: 600 VIGVELGSVWSRLGAQVTLVEFLGHVGGMGIDMEISKSIQRILTKQGLNFKLNTKVTGAS 779
VIGVELGSVW RLGA VT VEFLGHVGG+GIDMEISK+ QRIL KQG FKLNTKVTGA+
Sbjct: 223 VIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGAT 282
Query: 780 -KSGGKVLVNISGTKDDKSETIDCDTLL 860
KS GK+ V+I K+E I CD LL
Sbjct: 283 KKSDGKIDVSIEAASGGKAEVITCDVLL 310
>sp|P09623|DLDH_PIG Dihydrolipoyl dehydrogenase, mitochondrial precursor
(Dihydrolipoamide dehydrogenase)
Length = 509
Score = 379 bits (974), Expect = e-105
Identities = 195/268 (72%), Positives = 215/268 (80%), Gaps = 1/268 (0%)
Frame = +3
Query: 60 DLVVIGSGPGGYVAAIKAAQLGMKTVCVEKNATLGGTCLNVGCIPSKALLNNSHYYHMAK 239
D+ VIGSGPGGYVAAIKAAQLG KTVC+EKN TLGGTCLNVGCIPSKALLNNSHYYHMA
Sbjct: 43 DVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAH 102
Query: 240 SNELAARGIDCTGVSLNLEKMMNVKSKAVAGLTGGIKMLFKGNKVTHMEGVGSITGPNEV 419
+ A+RGI+ + V LNLEKMM KS AV LTGGI LFK NKV + G G ITG N+V
Sbjct: 103 GKDFASRGIEMSEVRLNLEKMMEQKSNAVKALTGGIAHLFKQNKVVRVNGYGKITGKNQV 162
Query: 420 TVTNNSGAKEKVSTKNILIASGSEVTPFPGIDIDEETVVSSTGALSLKKVPEKMVVIGAG 599
T T G+ E ++TKNILIA+GSEVTPFPGI IDE+TVVSSTGALSLKKVPEKMVVIGAG
Sbjct: 163 TATKADGSTEVINTKNILIATGSEVTPFPGITIDEDTVVSSTGALSLKKVPEKMVVIGAG 222
Query: 600 VIGVELGSVWSRLGAQVTLVEFLGHVGGMGIDMEISKSIQRILTKQGLNFKLNTKVTGAS 779
VIGVELGSVW RLGA VT VE LGHVGG+GIDME+SK+ QRIL KQG FKLNTKV GA+
Sbjct: 223 VIGVELGSVWQRLGADVTAVELLGHVGGIGIDMEVSKNFQRILQKQGFKFKLNTKVIGAT 282
Query: 780 -KSGGKVLVNISGTKDDKSETIDCDTLL 860
KS G + V+I K+E I CD LL
Sbjct: 283 KKSDGNIDVSIEAASGGKAEVITCDVLL 310
>sp|O08749|DLDH_MOUSE Dihydrolipoyl dehydrogenase, mitochondrial precursor
(Dihydrolipoamide dehydrogenase)
Length = 509
Score = 378 bits (970), Expect = e-104
Identities = 191/270 (70%), Positives = 216/270 (80%), Gaps = 1/270 (0%)
Frame = +3
Query: 54 QVDLVVIGSGPGGYVAAIKAAQLGMKTVCVEKNATLGGTCLNVGCIPSKALLNNSHYYHM 233
+ D+ VIGSGPGG VAAIK+AQLG KTVC+EKN TLGGTCLNVGCIPSKALLNNSHYYHM
Sbjct: 41 EADVTVIGSGPGGCVAAIKSAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHM 100
Query: 234 AKSNELAARGIDCTGVSLNLEKMMNVKSKAVAGLTGGIKMLFKGNKVTHMEGVGSITGPN 413
A + A+RGI+ V LNLEKMM K AV LTGGI LFK NKV H+ G G ITG N
Sbjct: 101 AHGKDFASRGIEIPEVRLNLEKMMEQKHSAVKALTGGIAHLFKQNKVVHVNGFGKITGKN 160
Query: 414 EVTVTNNSGAKEKVSTKNILIASGSEVTPFPGIDIDEETVVSSTGALSLKKVPEKMVVIG 593
+VT T G+ + + TKNIL+A+GSEVTPFPGI IDE+T+VSSTGALSLKKVPEK+VVIG
Sbjct: 161 QVTATKADGSTQVIDTKNILVATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKLVVIG 220
Query: 594 AGVIGVELGSVWSRLGAQVTLVEFLGHVGGMGIDMEISKSIQRILTKQGLNFKLNTKVTG 773
AGVIGVELGSVW RLGA VT VEFLGHVGG+GIDMEISK+ QRIL +QG FKLNTKVTG
Sbjct: 221 AGVIGVELGSVWQRLGADVTAVEFLGHVGGIGIDMEISKNFQRILQRQGFKFKLNTKVTG 280
Query: 774 AS-KSGGKVLVNISGTKDDKSETIDCDTLL 860
A+ KS GK+ V++ K+E I CD LL
Sbjct: 281 ATKKSDGKIDVSVEAASGGKAEVITCDVLL 310
>sp|O18480|DLDH_MANSE Dihydrolipoyl dehydrogenase (Dihydrolipoamide dehydrogenase) (E3)
Length = 497
Score = 320 bits (820), Expect = 3e-87
Identities = 174/292 (59%), Positives = 210/292 (71%), Gaps = 8/292 (2%)
Frame = +3
Query: 9 SSAFSSGLFRCYSNG-----QVDLVVIGSGPGGYVAAIKAAQLGMKTVCVEKNATLGGTC 173
S++F +G R S DLVVIG+GPGGYVAAIKAAQLGMK V VEK +LGGTC
Sbjct: 10 SASFRNGGVRIVSRQYSTTHDADLVVIGAGPGGYVAAIKAAQLGMKVVSVEKEPSLGGTC 69
Query: 174 LNVGCIPSKALLNNSHYYHMAKSNELAARGIDCTGVSLNLEKMMNVKSKAVAGLTGGIKM 353
LNVGCIPSKALL+N+H YHMAK ++ RGI+ V N + MM+ K AV LTGGI M
Sbjct: 70 LNVGCIPSKALLHNTHLYHMAK-HDFKHRGIETGEVKFNFKAMMDYKVNAVKALTGGIAM 128
Query: 354 LFKGNKVTHMEGVGSITGPNEVTVTNNSGAKEKVSTKNILIASGSEVTPFPGIDIDEETV 533
LF+ NKV + G G+I PN+V V G E V+TKNILIA+GSEVTPFPG+ DE+ +
Sbjct: 129 LFQKNKVKLVRGAGTIVAPNKVEVKGEKGV-ETVNTKNILIATGSEVTPFPGVTFDEKQI 187
Query: 534 VSSTGALSLKKVPEKMVVIGAGVIGVELGSVWSRLGAQVTLVEFLGHVGGMGIDMEISKS 713
++STGALSL+ VP+KM+VIGAGVIG+ELGSV+ RLGA VT +EFLG +GG+GIDME+SK
Sbjct: 188 ITSTGALSLESVPKKMLVIGAGVIGLELGSVYQRLGADVTAIEFLGSIGGIGIDMEVSKD 247
Query: 714 IQRILTKQGLNFKLNTKVTGASKSGGKVL---VNISGTKDDKSETIDCDTLL 860
RIL KQG+ FKL TKV G K G V V+I G K ET+DCD +L
Sbjct: 248 -YRILAKQGMKFKLETKVLGVKKEGSTVKVEDVSIEGAKGGNKETMDCDVVL 298
>sp|O00087|DLDH_SCHPO Dihydrolipoyl dehydrogenase, mitochondrial precursor (DLDH)
(Dihydrolipoamide dehydrogenase)
Length = 511
Score = 313 bits (801), Expect = 5e-85
Identities = 164/287 (57%), Positives = 208/287 (72%), Gaps = 1/287 (0%)
Frame = +3
Query: 3 RLSSAFSSGLFRCYSNGQVDLVVIGSGPGGYVAAIKAAQLGMKTVCVEKNATLGGTCLNV 182
RL SA +SG NG+ DL VIG GPGGYVAAI+ AQLG+KT+CVEK TLGGTCLNV
Sbjct: 34 RLYSAKASG------NGEYDLCVIGGGPGGYVAAIRGAQLGLKTICVEKRGTLGGTCLNV 87
Query: 183 GCIPSKALLNNSHYYHMAKSNELAARGIDCTGVSLNLEKMMNVKSKAVAGLTGGIKMLFK 362
GCIPSKALLNNSH YH K ++ RGID +GVS+NL +MM K +V LT GI+ LFK
Sbjct: 88 GCIPSKALLNNSHIYHTVK-HDTKRRGIDVSGVSVNLSQMMKAKDDSVKSLTSGIEYLFK 146
Query: 363 GNKVTHMEGVGSITGPNEVTVTNNSGAKEK-VSTKNILIASGSEVTPFPGIDIDEETVVS 539
NKV + +G GS P ++V GA ++ + KN +IA+GSEV PFPG+ IDE+ +VS
Sbjct: 147 KNKVEYAKGTGSFIDPQTLSVKGIDGAADQTIKAKNFIIATGSEVKPFPGVTIDEKKIVS 206
Query: 540 STGALSLKKVPEKMVVIGAGVIGVELGSVWSRLGAQVTLVEFLGHVGGMGIDMEISKSIQ 719
STGALSL +VP+KM V+G G+IG+E+GSVWSRLGA+VT+VEFL VGG +D +ISK++
Sbjct: 207 STGALSLSEVPKKMTVLGGGIIGLEMGSVWSRLGAEVTVVEFLPAVGG-PMDADISKALS 265
Query: 720 RILTKQGLNFKLNTKVTGASKSGGKVLVNISGTKDDKSETIDCDTLL 860
RI++KQG+ FK +TK+ A +G V V I K++K ET D LL
Sbjct: 266 RIISKQGIKFKTSTKLLSAKVNGDSVEVEIENMKNNKRETYQTDVLL 312
>sp|P09624|DLDH_YEAST Dihydrolipoyl dehydrogenase, mitochondrial precursor
(Dihydrolipoamide dehydrogenase)
Length = 499
Score = 281 bits (720), Expect = 1e-75
Identities = 152/291 (52%), Positives = 200/291 (68%), Gaps = 9/291 (3%)
Frame = +3
Query: 15 AFSSGLFRCYSNGQVDLVVIGSGPGGYVAAIKAAQLGMKTVCVEKNATLGGTCLNVGCIP 194
AFSS + N D+V+IG GP GYVAAIKAAQLG T CVEK LGGTCLNVGCIP
Sbjct: 13 AFSSTVRTLTINKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIP 72
Query: 195 SKALLNNSHYYHMAKSNELAARGIDCTG-VSLNLEKMMNVKSKAVAGLTGGIKMLFKGNK 371
SKALLNNSH +H + E RGID G + +N+ K AV LTGGI++LFK NK
Sbjct: 73 SKALLNNSHLFHQMHT-EAQKRGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNK 131
Query: 372 VTHMEGVGSITGPNEVTVTNNSGAKEKVS------TKNILIASGSEVTPFPGIDIDEETV 533
VT+ +G GS ++ VT G + V KNI++A+GSEVTPFPGI+IDEE +
Sbjct: 132 VTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGIEIDEEKI 191
Query: 534 VSSTGALSLKKVPEKMVVIGAGVIGVELGSVWSRLGAQVTLVEFLGHVGGMGIDMEISKS 713
VSSTGALSLK++P+++ +IG G+IG+E+GSV+SRLG++VT+VEF +G +D E++K+
Sbjct: 192 VSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-SMDGEVAKA 250
Query: 714 IQRILTKQGLNFKLNTKVTGASKSGGKVLVNI--SGTKDDKSETIDCDTLL 860
Q+ L KQGL+FKL+TKV A ++ K +V I TK +K E ++ + LL
Sbjct: 251 TQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLL 301
>sp|P31023|DLDH_PEA Dihydrolipoyl dehydrogenase, mitochondrial precursor (Glycine
cleavage system L protein) (Dihydrolipoamide
dehydrogenase)
Length = 501
Score = 277 bits (708), Expect = 3e-74
Identities = 145/284 (51%), Positives = 193/284 (67%)
Frame = +3
Query: 9 SSAFSSGLFRCYSNGQVDLVVIGSGPGGYVAAIKAAQLGMKTVCVEKNATLGGTCLNVGC 188
S AF+SG + + D+V+IG GPGGYVAAIKAAQLG KT C+EK LGGTCLNVGC
Sbjct: 28 SRAFASG------SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGC 81
Query: 189 IPSKALLNNSHYYHMAKSNELAARGIDCTGVSLNLEKMMNVKSKAVAGLTGGIKMLFKGN 368
IPSKALL++SH YH AK + A G+ + V ++L MM K KAV+ LT GI+ LFK N
Sbjct: 82 IPSKALLHSSHMYHEAK-HSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKN 140
Query: 369 KVTHMEGVGSITGPNEVTVTNNSGAKEKVSTKNILIASGSEVTPFPGIDIDEETVVSSTG 548
KVT+++G G P+E++V G V K+I+IA+GS+V PG+ IDE+ +VSSTG
Sbjct: 141 KVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIVSSTG 200
Query: 549 ALSLKKVPEKMVVIGAGVIGVELGSVWSRLGAQVTLVEFLGHVGGMGIDMEISKSIQRIL 728
AL+L ++P+K+VVIGAG IG+E+GSVW R+G++VT+VEF + +D EI K QR L
Sbjct: 201 ALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-MDAEIRKQFQRSL 259
Query: 729 TKQGLNFKLNTKVTGASKSGGKVLVNISGTKDDKSETIDCDTLL 860
KQG+ FKL TKV G SG V + + + + I+ D +L
Sbjct: 260 EKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVL 303
>sp|P90597|DLDH_TRYCR Dihydrolipoyl dehydrogenase (Dihydrolipoamide dehydrogenase)
Length = 477
Score = 254 bits (649), Expect = 2e-67
Identities = 136/268 (50%), Positives = 181/268 (67%), Gaps = 1/268 (0%)
Frame = +3
Query: 60 DLVVIGSGPGGYVAAIKAAQLGMKTVCVEKNATLGGTCLNVGCIPSKALLNNSHYYHMAK 239
D+VVIG GPGGYVA+IKAAQLGMKT CVEK LGGTCLNVGCIPSKALL+ +H YH A
Sbjct: 13 DVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHVYHDAH 72
Query: 240 SNELAARGIDCTGVSLNLEKMMNVKSKAVAGLTGGIKMLFKGNKVTHMEGVGSITGPNEV 419
+N + GV+++ KM K +AV GLTGG++ LFK NKVT+ +G GS + +
Sbjct: 73 ANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSI 132
Query: 420 TVTNNSGAKEKVSTKNILIASGSEVTPFPGIDIDEETVVSSTGALSLKKVPEKMVVIGAG 599
V G +E TK +IA+GSE T P + DE+ V+SSTGAL+L +VP+ MVVIG G
Sbjct: 133 RVNGLDGKQEMFETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMVVIGGG 192
Query: 600 VIGVELGSVWSRLGAQVTLVEFLGHVGGMGIDMEISKSIQRILTK-QGLNFKLNTKVTGA 776
VIG+ELGSVW+RLGA+VT+VEF +D +++ ++ L K + + F +TKV G
Sbjct: 193 VIGLELGSVWARLGAKVTVVEFAPRCAPT-LDEDVTNALVGALAKNEKMKFMTSTKVVGG 251
Query: 777 SKSGGKVLVNISGTKDDKSETIDCDTLL 860
+ +G V + + G K+ K ET+ C+ LL
Sbjct: 252 TNNGDSVSLEVEG-KNGKRETVTCEALL 278
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,439,069
Number of Sequences: 369166
Number of extensions: 2290623
Number of successful extensions: 7801
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7531
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8534739105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)