Planaria EST Database


DrC_02478

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02478
         (860 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O77819|ROCK1_RABIT  Rho-associated protein kinase 1 (Rho-...    73   1e-12
sp|Q28021|ROCK2_BOVIN  Rho-associated protein kinase 2 (Rho-...    69   1e-11
sp|O75116|ROCK2_HUMAN  Rho-associated protein kinase 2 (Rho-...    69   2e-11
sp|Q62868|ROCK2_RAT  Rho-associated protein kinase 2 (Rho-as...    68   3e-11
sp|P70335|ROCK1_MOUSE  Rho-associated protein kinase 1 (Rho-...    68   4e-11
sp|P70336|ROCK2_MOUSE  Rho-associated protein kinase 2 (Rho-...    67   5e-11
sp|Q13464|ROCK1_HUMAN  Rho-associated protein kinase 1 (Rho-...    67   6e-11
sp|P61584|ROCK1_PANTR  Rho-associated protein kinase 1 (Rho-...    67   6e-11
sp|Q63644|ROCK1_RAT  Rho-associated protein kinase 1 (Rho-as...    59   1e-08
sp|Q9VJE5|CL190_DROME  Restin homolog (Cytoplasmic linker pr...    37   0.071
>sp|O77819|ROCK1_RABIT Rho-associated protein kinase 1 (Rho-associated, coiled-coil
            containing protein kinase 1) (p160 ROCK-1) (p160ROCK)
            (cAMP dependent protein kinase ROCK-I) (CePKA) (Corneal
            epithelial Rho-associated-Ser/Thr kinase 1) (HEBM1)
          Length = 1354

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 62/295 (21%), Positives = 124/295 (42%), Gaps = 21/295 (7%)
 Frame = +3

Query: 3    KFQEKV----KECNEIRNDCKDWQDKYKDLKAELDNQNNIIKGLRADLNNRG-------- 146
            KF + V    KE N+++    +      +L+ +L ++ + I+ LRA L++          
Sbjct: 1047 KFNQMVVKHQKELNDMQAQLVEECTHRNELQMQLASKESDIEQLRAKLSDLSDSTSVASF 1106

Query: 147  -TRNELTPNLELKSLEGKLEILKKSKGRHKIHWIPYYGNLKPFKLDIYQNEND---NIPF 314
             + +E  PNL    +EG L +  +   + +  W   Y  +   K+  Y +E D   + P 
Sbjct: 1107 PSADETDPNLPESRIEGWLSVPNRGNIK-RYGWKKQYVVVSSKKILFYNDEQDKEQSNPS 1165

Query: 315  ISIDLRSVMHIREPSAAECVHIDKALLPQIIQIIYEKQDSSEDFRRQSVISVDASRRAKA 494
            + +D+  + H+R  +  +    +   +P+I QI+Y  +        +  + V+  ++A+ 
Sbjct: 1166 MVLDIDKLFHVRPVTQGDVYRAETEEIPKIFQILYANEGEC-----RKDVEVEPVQQAEK 1220

Query: 495  STLLVDDANSSIRSSFIGGDPGSNGIYNIENHSFVPMRFRSYANCDLCHQSCSELLNPPL 674
            +                          N + H F+P  +   ANC+ C +    +  PP 
Sbjct: 1221 TNF-----------------------QNHKGHEFIPTLYHFPANCEACAKPLWHVFKPPP 1257

Query: 675  SLECANCKKRIHFDHINTNEYKIQWCQGAIEV-----VLFKVESKEARNAWINCL 824
            +LEC  C  + H DH++  E  I  C+ + +V     +L    S++ +  W+  L
Sbjct: 1258 ALECRRCHVKCHRDHLDKKEDLISPCKVSYDVTSARDMLLLACSQDEQKKWVTHL 1312
>sp|Q28021|ROCK2_BOVIN Rho-associated protein kinase 2 (Rho-associated, coiled-coil
            containing protein kinase 2) (p164 ROCK-2)
          Length = 1388

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 62/288 (21%), Positives = 115/288 (39%), Gaps = 20/288 (6%)
 Frame = +3

Query: 21   KECNEIRNDCKDWQDKYKDLKAELDNQNNIIKGLRADLN------------NRGTRNELT 164
            KE NE++    +      +L+  LD++++ I+ LR+ L             +     E  
Sbjct: 1086 KELNEMQAQIAEESQIRIELQMTLDSKDSDIEQLRSQLQALHIGLDSSSIGSGPGDTEAD 1145

Query: 165  PNLELKSLEGKLEILKKSKGRHKIHWIPYYGNLKPFKLDIYQNEND---NIPFISIDLRS 335
                   LEG L +  ++  + K  W+  Y  +   K+  Y +E D   + P++ +D+  
Sbjct: 1146 DGFPESRLEGWLSLPVRNNTK-KFGWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDK 1204

Query: 336  VMHIREPSAAECVHIDKALLPQIIQIIYEKQDSSEDFRRQSVISVDASRRAKASTLLVDD 515
            + H+R  +  +    D   +P+I QI+Y  +  S+  +   V  V               
Sbjct: 1205 LFHVRPVTQTDVYRADAKEIPRIFQILYANEGESKKEQEFPVEPVGEK------------ 1252

Query: 516  ANSSIRSSFIGGDPGSNGIYNIENHSFVPMRFRSYANCDLCHQSCSELLNPPLSLECANC 695
                           SN I + + H F+P  +    NC+ C +    +  PP +LEC  C
Sbjct: 1253 ---------------SNYICH-KGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRC 1296

Query: 696  KKRIHFDHINTNEYKIQWCQGAIEV-----VLFKVESKEARNAWINCL 824
              + H DH++  E  I  C+   ++     +L    S E +  W++ L
Sbjct: 1297 HIKCHKDHMDKKEEIIAPCKVYYDISSAKNLLLLANSTEEQQKWVSRL 1344
>sp|O75116|ROCK2_HUMAN Rho-associated protein kinase 2 (Rho-associated, coiled-coil
            containing protein kinase 2) (p164 ROCK-2) (Rho kinase 2)
          Length = 1388

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 63/288 (21%), Positives = 116/288 (40%), Gaps = 20/288 (6%)
 Frame = +3

Query: 21   KECNEIRNDCKDWQDKYKDLKAELDNQNNIIKGLRADLN-----------NRGTRN-ELT 164
            KE NE++    +      +L+  LD++++ I+ LR+ L              G  + E  
Sbjct: 1086 KELNEMQAQIAEESQIRIELQMTLDSKDSDIEQLRSQLQALHIGLDSSSIGSGPGDAEAD 1145

Query: 165  PNLELKSLEGKLEILKKSKGRHKIHWIPYYGNLKPFKLDIYQNEND---NIPFISIDLRS 335
                   LEG L +  ++  + K  W+  Y  +   K+  Y +E D   + P++ +D+  
Sbjct: 1146 DGFPESRLEGWLSLPVRNNTK-KFGWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDK 1204

Query: 336  VMHIREPSAAECVHIDKALLPQIIQIIYEKQDSSEDFRRQSVISVDASRRAKASTLLVDD 515
            + H+R  +  +    D   +P+I QI+Y  +  S+  +   V  V               
Sbjct: 1205 LFHVRPVTQTDVYRADAKEIPRIFQILYANEGESKKEQEFPVEPVGEK------------ 1252

Query: 516  ANSSIRSSFIGGDPGSNGIYNIENHSFVPMRFRSYANCDLCHQSCSELLNPPLSLECANC 695
                           SN I + + H F+P  +    NC+ C +    +  PP +LEC  C
Sbjct: 1253 ---------------SNYICH-KGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRC 1296

Query: 696  KKRIHFDHINTNEYKIQWCQGAIEV-----VLFKVESKEARNAWINCL 824
              + H DH++  E  I  C+   ++     +L    S E +  W++ L
Sbjct: 1297 HIKCHKDHMDKKEEIIAPCKVYYDISTAKNLLLLANSTEEQQKWVSRL 1344
>sp|Q62868|ROCK2_RAT Rho-associated protein kinase 2 (Rho-associated, coiled-coil
            containing protein kinase 2) (p164 ROCK-2) (RhoA-binding
            kinase 2) (p150 ROK-alpha) (ROKalpha)
          Length = 1379

 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 63/288 (21%), Positives = 117/288 (40%), Gaps = 20/288 (6%)
 Frame = +3

Query: 21   KECNEIRNDCKDWQDKYKDLKAELDNQNNIIKGLRADLN-----------NRGTRN-ELT 164
            KE NE++    +      +L+  LD++++ I+ LR+ L              G  + E  
Sbjct: 1077 KELNEMQAQIAEESQIRIELQMTLDSKDSDIEQLRSQLQALHIGMDSSSIGSGPGDAEPD 1136

Query: 165  PNLELKSLEGKLEILKKSKGRHKIHWIPYYGNLKPFKLDIYQNEND---NIPFISIDLRS 335
                   LEG L +  ++  + K  W+  Y  +   K+  Y +E D   + P++ +D+  
Sbjct: 1137 DGFPESRLEGWLSLPVRNNTK-KFGWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDK 1195

Query: 336  VMHIREPSAAECVHIDKALLPQIIQIIYEKQDSSEDFRRQSVISVDASRRAKASTLLVDD 515
            + H+R  +  +    D   +P+I QI+Y  +  S+                K     V+ 
Sbjct: 1196 LFHVRPVTQTDVYRADAKEIPRIFQILYANEGESK----------------KEPEFPVEP 1239

Query: 516  ANSSIRSSFIGGDPGSNGIYNIENHSFVPMRFRSYANCDLCHQSCSELLNPPLSLECANC 695
                           SN I + + H F+P  +    NC+ C +    +  PP +LEC+ C
Sbjct: 1240 VGEK-----------SNYICH-KGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECSRC 1287

Query: 696  KKRIHFDHINTNEYKIQWCQGAIEV-----VLFKVESKEARNAWINCL 824
              + H DH++  E  I  C+   ++     +L    S E +  W++ L
Sbjct: 1288 HIKCHKDHMDKKEEIIAPCKVYYDISSAKNLLLLANSTEEQQKWVSRL 1335

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +3

Query: 9    QEKVKECNEIRNDCKDWQDKYKDLKAELDNQNNIIKGLRADLNN--RGTRNELTPNLELK 182
            +EK K C E++   +D QD+   L A+L+     I   +AD     R    E   +LE +
Sbjct: 879  EEKTKLCKELQQKKQDLQDERDSLAAQLE-----ITLTKADSEQLARSIAEEQYSDLEKE 933

Query: 183  SLEGKLEILKKSKGRHK 233
             +  +LEI K+   RHK
Sbjct: 934  KIMKELEI-KEMMARHK 949
>sp|P70335|ROCK1_MOUSE Rho-associated protein kinase 1 (Rho-associated, coiled-coil
            containing protein kinase 1) (p160 ROCK-1) (p160ROCK)
          Length = 1354

 Score = 67.8 bits (164), Expect = 4e-11
 Identities = 61/295 (20%), Positives = 120/295 (40%), Gaps = 21/295 (7%)
 Frame = +3

Query: 3    KFQEKV----KECNEIRNDCKDWQDKYKDLKAELDNQNNIIKGLRADLNNRG-------- 146
            KF + V    KE N+++    +      +L+ +L ++ + I+ LRA L +          
Sbjct: 1047 KFNQMVVKHQKELNDMQAQLVEECTHRNELQMQLASKESDIEQLRAKLLDLSDSTSVASF 1106

Query: 147  -TRNELTPNLELKSLEGKLEILKKSKGRHKIHWIPYYGNLKPFKLDIYQNEND---NIPF 314
             + +E   NL    +EG L +  +   + +  W   Y  +   K+  Y +E D   + P 
Sbjct: 1107 PSADETDGNLPESRIEGWLSVPNRGNIK-RYGWKKQYVVVSSKKILFYNDEQDKEQSSPS 1165

Query: 315  ISIDLRSVMHIREPSAAECVHIDKALLPQIIQIIYEKQDSSEDFRRQSVISVDASRRAKA 494
            + +D+  + H+R  +  +    +   +P+I QI+Y  +                      
Sbjct: 1166 MVLDIDKLFHVRPVTQGDVYRAETEEIPKIFQILYANEGECR------------------ 1207

Query: 495  STLLVDDANSSIRSSFIGGDPGSNGIYNIENHSFVPMRFRSYANCDLCHQSCSELLNPPL 674
              + V+      +++F           N + H F+P  +   ANC+ C +    +  PP 
Sbjct: 1208 KDIEVEPVQQGEKTNF----------QNHKGHEFIPTLYHFPANCEACAKPLWHVFKPPP 1257

Query: 675  SLECANCKKRIHFDHINTNEYKIQWCQGAIEV-----VLFKVESKEARNAWINCL 824
            +LEC  C  + H DH++  E  I  C+ + +V     +L    S++ +  W+  L
Sbjct: 1258 ALECRRCHVKCHRDHLDKKEDLISPCKVSYDVTSARDMLLLACSQDEQKKWVTHL 1312
>sp|P70336|ROCK2_MOUSE Rho-associated protein kinase 2 (Rho-associated, coiled-coil
            containing protein kinase 2) (p164 ROCK-2)
          Length = 1388

 Score = 67.4 bits (163), Expect = 5e-11
 Identities = 63/288 (21%), Positives = 116/288 (40%), Gaps = 20/288 (6%)
 Frame = +3

Query: 21   KECNEIRNDCKDWQDKYKDLKAELDNQNNIIKGLRADLN-----------NRGTRN-ELT 164
            KE NE++    +      +L+  LD++++ I+ LR+ L              G  + E  
Sbjct: 1086 KELNEMQAQIAEESQIRIELQMTLDSKDSDIEQLRSQLQALHIGMDSSSIGSGPGDAEPD 1145

Query: 165  PNLELKSLEGKLEILKKSKGRHKIHWIPYYGNLKPFKLDIYQNEND---NIPFISIDLRS 335
                   LEG L +  ++  + K  W+  Y  +   K+  Y +E D   + P++ +D+  
Sbjct: 1146 DGFPESRLEGWLSLPVRNNTK-KFGWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDK 1204

Query: 336  VMHIREPSAAECVHIDKALLPQIIQIIYEKQDSSEDFRRQSVISVDASRRAKASTLLVDD 515
            + H+R  +  +    D   +P+I QI+Y  +  S+                K     V+ 
Sbjct: 1205 LFHVRPVTQTDVYRADAKEIPRIFQILYANEGESK----------------KEPEFPVEP 1248

Query: 516  ANSSIRSSFIGGDPGSNGIYNIENHSFVPMRFRSYANCDLCHQSCSELLNPPLSLECANC 695
                           SN I + + H F+P  +    NC+ C +    +  PP +LEC  C
Sbjct: 1249 VGEK-----------SNYICH-KGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRC 1296

Query: 696  KKRIHFDHINTNEYKIQWCQGAIEV-----VLFKVESKEARNAWINCL 824
              + H DH++  E  I  C+   ++     +L    S E +  W++ L
Sbjct: 1297 HIKCHKDHMDKKEEIIAPCKVYYDISSAKNLLLLANSTEEQQKWVSRL 1344

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +3

Query: 9    QEKVKECNEIRNDCKDWQDKYKDLKAELDNQNNIIKGLRADLNN--RGTRNELTPNLELK 182
            +EK K C E++   +D QD+   L A+L+     I   +AD     R    E   +LE +
Sbjct: 888  EEKTKLCKELQQKKQDLQDERDSLAAQLE-----ITLTKADSEQLARSIAEEQYSDLEKE 942

Query: 183  SLEGKLEILKKSKGRHK 233
             +  +LEI K+   RHK
Sbjct: 943  KIMKELEI-KEMMARHK 958
>sp|Q13464|ROCK1_HUMAN Rho-associated protein kinase 1 (Rho-associated, coiled-coil
            containing protein kinase 1) (p160 ROCK-1) (p160ROCK)
          Length = 1354

 Score = 67.0 bits (162), Expect = 6e-11
 Identities = 62/296 (20%), Positives = 120/296 (40%), Gaps = 22/296 (7%)
 Frame = +3

Query: 3    KFQEKV----KECNEIRNDCKDWQDKYKDLKAELDNQNNIIKGLRADLNNRG-------- 146
            KF + V    KE N+++    +      +L+ +L ++ + I+ LRA L +          
Sbjct: 1047 KFNQMVVKHQKELNDMQAQLVEECAHRNELQMQLASKESDIEQLRAKLLDLSDSTSVASF 1106

Query: 147  -TRNELTPNLELKSLEGKLEILKKSKGRHKIHWIPYYGNLKPFKLDIYQNEND---NIPF 314
             + +E   NL    +EG L +  +   + +  W   Y  +   K+  Y +E D   + P 
Sbjct: 1107 PSADETDGNLPESRIEGWLSVPNRGNIK-RYGWKKQYVVVSSKKILFYNDEQDKEQSNPS 1165

Query: 315  ISIDLRSVMHIREPSAAECVHIDKALLPQIIQIIYEKQ-DSSEDFRRQSVISVDASRRAK 491
            + +D+  + H+R  +  +    +   +P+I QI+Y  + +  +D   + V   + +    
Sbjct: 1166 MVLDIDKLFHVRPVTQGDVYRAETEEIPKIFQILYANEGECRKDVEMEPVQQAEKTN--- 1222

Query: 492  ASTLLVDDANSSIRSSFIGGDPGSNGIYNIENHSFVPMRFRSYANCDLCHQSCSELLNPP 671
                                        N + H F+P  +   ANCD C +    +  PP
Sbjct: 1223 --------------------------FQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPP 1256

Query: 672  LSLECANCKKRIHFDHINTNEYKIQWCQGAIEV-----VLFKVESKEARNAWINCL 824
             +LEC  C  + H DH++  E  I  C+ + +V     +L    S++ +  W+  L
Sbjct: 1257 PALECRRCHVKCHRDHLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHL 1312
>sp|P61584|ROCK1_PANTR Rho-associated protein kinase 1 (Rho-associated, coiled-coil
            containing protein kinase 1) (p160 ROCK-1) (p160ROCK)
          Length = 1003

 Score = 67.0 bits (162), Expect = 6e-11
 Identities = 62/296 (20%), Positives = 120/296 (40%), Gaps = 22/296 (7%)
 Frame = +3

Query: 3    KFQEKV----KECNEIRNDCKDWQDKYKDLKAELDNQNNIIKGLRADLNNRG-------- 146
            KF + V    KE N+++    +      +L+ +L ++ + I+ LRA L +          
Sbjct: 696  KFNQMVVKHQKELNDMQAQLVEECAHRNELQMQLASKESDIEQLRAKLLDLSDSTSVASF 755

Query: 147  -TRNELTPNLELKSLEGKLEILKKSKGRHKIHWIPYYGNLKPFKLDIYQNEND---NIPF 314
             + +E   NL    +EG L +  +   + +  W   Y  +   K+  Y +E D   + P 
Sbjct: 756  PSADETDGNLPESRIEGWLSVPNRGNIK-RYGWKKQYVVVSSKKILFYNDEQDKEQSNPS 814

Query: 315  ISIDLRSVMHIREPSAAECVHIDKALLPQIIQIIYEKQ-DSSEDFRRQSVISVDASRRAK 491
            + +D+  + H+R  +  +    +   +P+I QI+Y  + +  +D   + V   + +    
Sbjct: 815  MVLDIDKLFHVRPVTQGDVYRAETEEIPKIFQILYANEGECRKDVEMEPVQQAEKTN--- 871

Query: 492  ASTLLVDDANSSIRSSFIGGDPGSNGIYNIENHSFVPMRFRSYANCDLCHQSCSELLNPP 671
                                        N + H F+P  +   ANCD C +    +  PP
Sbjct: 872  --------------------------FQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPP 905

Query: 672  LSLECANCKKRIHFDHINTNEYKIQWCQGAIEV-----VLFKVESKEARNAWINCL 824
             +LEC  C  + H DH++  E  I  C+ + +V     +L    S++ +  W+  L
Sbjct: 906  PALECRRCHVKCHRDHLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHL 961
>sp|Q63644|ROCK1_RAT Rho-associated protein kinase 1 (Rho-associated, coiled-coil
            containing protein kinase 1) (p160 ROCK-1) (p160ROCK)
            (p150 RhoA-binding kinase ROK beta) (Liver
            regeneration-related protein LRRG199)
          Length = 1369

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 57/286 (19%), Positives = 110/286 (38%), Gaps = 30/286 (10%)
 Frame = +3

Query: 3    KFQEKV----KECNEIRNDCKDWQDKYKDLKAELDNQNNIIKGLRADLNNRGTRNELTPN 170
            KF + V    KE N+++    +      +L+ +L ++ + I+ LRA L +      +   
Sbjct: 1047 KFNQMVVKHQKELNDMQAQLVEECTHRNELQMQLASKESDIEQLRAKLLDLSDSTSVASF 1106

Query: 171  LELKSLEGKLEI---------LKKSKGRHKIHW--IPYYGNLKPF------------KLD 281
                  +G L +         +  S       W  +P  GN+K +            K+ 
Sbjct: 1107 PSADETDGNLPVGSACIPYLFIFYSSSSRIEGWLSVPNRGNIKRYGWKKQYVVVSSKKML 1166

Query: 282  IYQNEND---NIPFISIDLRSVMHIREPSAAECVHIDKALLPQIIQIIYEKQDSSEDFRR 452
             Y +E D   + P + +D+  + H+R  +  +    +   +P+I QI+Y  +        
Sbjct: 1167 FYNDEQDKEQSSPSMVLDIDKLFHVRPVTQGDVYRAETEEIPKIFQILYANEGECR---- 1222

Query: 453  QSVISVDASRRAKASTLLVDDANSSIRSSFIGGDPGSNGIYNIENHSFVPMRFRSYANCD 632
                            + V+      +++F           N + H F+P  +   ANC+
Sbjct: 1223 --------------KDIEVEPVQQGEKTNF----------QNHKGHEFIPTLYHFPANCE 1258

Query: 633  LCHQSCSELLNPPLSLECANCKKRIHFDHINTNEYKIQWCQGAIEV 770
             C +    +  PP +LEC  C  + H DH++  E  I  C+ + +V
Sbjct: 1259 ACAKPLWHVFKPPPALECRRCHVKSHRDHLDKKEDLIPPCKVSYDV 1304
>sp|Q9VJE5|CL190_DROME Restin homolog (Cytoplasmic linker protein 190) (Microtubule binding
            protein 190) (d-CLIP-190)
          Length = 1690

 Score = 37.0 bits (84), Expect = 0.071
 Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
 Frame = +3

Query: 12   EKVKECNEIRNDCKDWQDKYKDLKAELDNQ----NNIIKGLRADLNNRGTRN-ELTPNLE 176
            +K KE  E+R   +D QD    LKAE + +       IK L+ ++    T N EL+   +
Sbjct: 1020 QKEKELQELRQQLQDSQDSQTKLKAEGERKEKSFEESIKNLQEEVTKAKTENLELSTGTQ 1079

Query: 177  --LKSLEGKLEILK---KSKGRHKIHWIPYYGNLKPFKLDIYQNENDNIPFISIDLRSVM 341
              +K L+ +LEI     + K +          +LK   ++  Q  N NI   + +L +V+
Sbjct: 1080 TTIKDLQERLEITNAELQHKEKMASEDAQKIADLKTL-VEAIQVANANISATNAELSTVL 1138

Query: 342  HIREPSAAECVHI 380
             + +   +E  HI
Sbjct: 1139 EVLQAEKSETNHI 1151
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,231,143
Number of Sequences: 369166
Number of extensions: 1782044
Number of successful extensions: 5843
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5836
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8534739105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)