Planaria EST Database


DrC_02476

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02476
         (866 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9UHI7|S23A1_HUMAN  Solute carrier family 23 member 1 (So...   142   9e-34
sp|Q9Z2J0|S23A1_MOUSE  Solute carrier family 23 member 1 (So...   142   2e-33
sp|Q9WTW7|S23A1_RAT  Solute carrier family 23 member 1 (Sodi...   141   2e-33
sp|Q9WTW8|S23A2_RAT  Solute carrier family 23 member 2 (Sodi...   137   3e-32
sp|Q9EPR4|S23A2_MOUSE  Solute carrier family 23 member 2 (So...   137   3e-32
sp|Q9UGH3|S23A2_HUMAN  Solute carrier family 23 member 2 (So...   137   4e-32
sp|O32140|PUCK_BACSU  Uric acid permease pucK                      68   3e-11
sp|P50487|Y397_CLOPE  Putative purine permease CPE0397             66   1e-10
sp|Q46821|YGFU_ECOLI  Putative purine permease ygfU                63   9e-10
sp|P42086|PBUX_BACSU  Xanthine permease                            62   3e-09
>sp|Q9UHI7|S23A1_HUMAN Solute carrier family 23 member 1 (Sodium-dependent vitamin C
            transporter 1) (hSVCT1) (Na(+)/L-ascorbic acid
            transporter 1) (Yolk sac permease-like molecule 3)
          Length = 598

 Score =  142 bits (359), Expect = 9e-34
 Identities = 79/231 (34%), Positives = 127/231 (54%), Gaps = 1/231 (0%)
 Frame = +1

Query: 13   APKVPQFAINRGIFIEGIGVFLSGFLGAVSCPTSYSGNIGLMKITKAGNVRIGQVTAFIM 192
            AP  P  AINRGIF EGI   ++G LG  +  TS S NIG++ ITK G+ R+ Q  A IM
Sbjct: 348  APPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAAIM 407

Query: 193  ILFGIFPVFGALFVSIPDPAVGGVLFIVCLLVLGCAINNFQYIDMYSTRNIVIYGFSVSF 372
            ++ G    F ALF S+PDP +GG+   +  ++    ++N Q++DM S+RN+ + GFS+ F
Sbjct: 408  LVLGTIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFF 467

Query: 373  GLTFPTWCSSHLDLLTVGYQPIDEVIHILLTIHLFIAAVTAIFLDNVLPGYYYGEKDKAI 552
            GLT P +  S+   +  G   +D+++ +LLT  +F+    A  LDN +P    G  ++  
Sbjct: 468  GLTLPNYLESNPGAINTGILEVDQILIVLLTTEMFVGGCLAFILDNTVP----GSPEERG 523

Query: 553  SICGTECVKAYTEFERHL-AFDLKILKWLAIKCQCLQFLPLFPAYRNLKES 702
             I       A ++    L ++D  I   +  +   L+++P+ P ++    S
Sbjct: 524  LIQWKAGAHANSDMSSSLKSYDFPIGMGIVKRITFLKYIPICPVFKGFSSS 574
>sp|Q9Z2J0|S23A1_MOUSE Solute carrier family 23 member 1 (Sodium-dependent vitamin C
           transporter 1) (Na(+)/L-ascorbic acid transporter 1)
           (Yolk sac permease-like molecule 3)
          Length = 605

 Score =  142 bits (357), Expect = 2e-33
 Identities = 70/170 (41%), Positives = 104/170 (61%)
 Frame = +1

Query: 13  APKVPQFAINRGIFIEGIGVFLSGFLGAVSCPTSYSGNIGLMKITKAGNVRIGQVTAFIM 192
           AP  P  AINRGIF EGI   ++G LG  +  TS S NIG++ ITK G+ R+ Q  A IM
Sbjct: 355 APPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIM 414

Query: 193 ILFGIFPVFGALFVSIPDPAVGGVLFIVCLLVLGCAINNFQYIDMYSTRNIVIYGFSVSF 372
           ++ G    F ALF S+PDP +GG+   +  ++    ++N Q++DM S+RN+ + GFS+ F
Sbjct: 415 LILGAIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFF 474

Query: 373 GLTFPTWCSSHLDLLTVGYQPIDEVIHILLTIHLFIAAVTAIFLDNVLPG 522
           GLT P +  S+   +  G   +D+++ +LLT  +F+    A  LDN +PG
Sbjct: 475 GLTLPNYLDSNPGAINTGIPEVDQILTVLLTTEMFVGGCLAFILDNTVPG 524
>sp|Q9WTW7|S23A1_RAT Solute carrier family 23 member 1 (Sodium-dependent vitamin C
           transporter 1) (Na(+)/L-ascorbic acid transporter 1)
          Length = 604

 Score =  141 bits (356), Expect = 2e-33
 Identities = 69/170 (40%), Positives = 104/170 (61%)
 Frame = +1

Query: 13  APKVPQFAINRGIFIEGIGVFLSGFLGAVSCPTSYSGNIGLMKITKAGNVRIGQVTAFIM 192
           AP  P  AINRGIF EG+   ++G LG  +  TS S NIG++ ITK G+ R+ Q  A IM
Sbjct: 355 APPPPVHAINRGIFTEGVCCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIM 414

Query: 193 ILFGIFPVFGALFVSIPDPAVGGVLFIVCLLVLGCAINNFQYIDMYSTRNIVIYGFSVSF 372
           ++ G    F ALF S+PDP +GG+   +  ++    ++N Q++DM S+RN+ + GFS+ F
Sbjct: 415 LILGAIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFF 474

Query: 373 GLTFPTWCSSHLDLLTVGYQPIDEVIHILLTIHLFIAAVTAIFLDNVLPG 522
           GLT P +  S+   +  G   +D+++ +LLT  +F+    A  LDN +PG
Sbjct: 475 GLTLPNYLDSNPGAINTGVPEVDQILTVLLTTEMFVGGCLAFILDNTVPG 524
>sp|Q9WTW8|S23A2_RAT Solute carrier family 23 member 2 (Sodium-dependent vitamin C
            transporter 2) (Na(+)/L-ascorbic acid transporter 2)
          Length = 592

 Score =  137 bits (346), Expect = 3e-32
 Identities = 80/225 (35%), Positives = 124/225 (55%), Gaps = 1/225 (0%)
 Frame = +1

Query: 13   APKVPQFAINRGIFIEGIGVFLSGFLGAVSCPTSYSGNIGLMKITKAGNVRIGQVTAFIM 192
            AP  P  AINRGIF+EG+   L G  G  +  TS S NIG++ ITK G+ R+ Q  A +M
Sbjct: 349  APPPPIHAINRGIFVEGLSCVLDGVFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALM 408

Query: 193  ILFGIFPVFGALFVSIPDPAVGGVLFIVCLLVLGCAINNFQYIDMYSTRNIVIYGFSVSF 372
            +  G+   F ALF S+PDP +G +   +  ++    ++N Q+ID+ S+RN+ + GFS+ F
Sbjct: 409  LGLGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFF 468

Query: 373  GLTFPTWCSSHLDLLTVGYQPIDEVIHILLTIHLFIAAVTAIFLDNVLPGYYYGEKDKAI 552
            GL  P++     + L  G   ID+V+++LLT  +F+    A  LDN +PG       K  
Sbjct: 469  GLVLPSYLRQ--NPLVTGITGIDQVLNVLLTTAMFVGGCVAFILDNTIPGTPEERGIKKW 526

Query: 553  SICGTECVKAYTEFERH-LAFDLKILKWLAIKCQCLQFLPLFPAY 684
                ++  K+    E + L F + I+K    K +C  +LP+ P +
Sbjct: 527  KKGVSKGNKSLDGMESYNLPFGMNIIK----KYRCFSYLPISPTF 567
>sp|Q9EPR4|S23A2_MOUSE Solute carrier family 23 member 2 (Sodium-dependent vitamin C
            transporter 2) (mSVCT2) (Na(+)/L-ascorbic acid
            transporter 2) (Yolk sac permease-like molecule 2)
          Length = 647

 Score =  137 bits (346), Expect = 3e-32
 Identities = 79/225 (35%), Positives = 124/225 (55%), Gaps = 1/225 (0%)
 Frame = +1

Query: 13   APKVPQFAINRGIFIEGIGVFLSGFLGAVSCPTSYSGNIGLMKITKAGNVRIGQVTAFIM 192
            AP  P  AINRGIF+EG+   L G  G  +  TS S NIG++ ITK G+ R+ Q  A +M
Sbjct: 404  APPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALM 463

Query: 193  ILFGIFPVFGALFVSIPDPAVGGVLFIVCLLVLGCAINNFQYIDMYSTRNIVIYGFSVSF 372
            +  G+   F ALF S+PDP +G +   +  ++    ++N Q+ID+ S+RN+ + GFS+ F
Sbjct: 464  LGLGMVGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFF 523

Query: 373  GLTFPTWCSSHLDLLTVGYQPIDEVIHILLTIHLFIAAVTAIFLDNVLPGYYYGEKDKAI 552
            GL  P++     + L  G   ID+++++LLT  +F+    A  LDN +PG       K  
Sbjct: 524  GLVLPSYLRQ--NPLVTGITGIDQILNVLLTTAMFVGGCVAFILDNTIPGTPEERGIKKW 581

Query: 553  SICGTECVKAYTEFERH-LAFDLKILKWLAIKCQCLQFLPLFPAY 684
                ++  K+    E + L F + I+K    K +C  +LP+ P +
Sbjct: 582  KKGVSKGSKSLDGMESYNLPFGMNIIK----KYRCFSYLPISPTF 622
>sp|Q9UGH3|S23A2_HUMAN Solute carrier family 23 member 2 (Sodium-dependent vitamin C
            transporter 2) (hSVCT2) (Na(+)/L-ascorbic acid
            transporter 2) (Yolk sac permease-like molecule 2)
            (Nucleobase transporter-like 1 protein)
          Length = 650

 Score =  137 bits (345), Expect = 4e-32
 Identities = 76/224 (33%), Positives = 122/224 (54%)
 Frame = +1

Query: 13   APKVPQFAINRGIFIEGIGVFLSGFLGAVSCPTSYSGNIGLMKITKAGNVRIGQVTAFIM 192
            AP  P  AINRGIF+EG+   L G  G  +  TS S NIG++ ITK G+ R+ Q  A +M
Sbjct: 407  APPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQCGAALM 466

Query: 193  ILFGIFPVFGALFVSIPDPAVGGVLFIVCLLVLGCAINNFQYIDMYSTRNIVIYGFSVSF 372
            +  G+   F ALF S+PDP +G +   +  ++    ++N Q+ID+ S+RN+ + GFS+ F
Sbjct: 467  LALGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFF 526

Query: 373  GLTFPTWCSSHLDLLTVGYQPIDEVIHILLTIHLFIAAVTAIFLDNVLPGYYYGEKDKAI 552
            GL  P++     + L  G   ID+V+++LLT  +F+    A  LDN +PG     +++ I
Sbjct: 527  GLVLPSYLRQ--NPLVTGITGIDQVLNVLLTTAMFVGGCVAFILDNTIPG---TPEERGI 581

Query: 553  SICGTECVKAYTEFERHLAFDLKILKWLAIKCQCLQFLPLFPAY 684
                    K     +   +++L     +  K +C  +LP+ P +
Sbjct: 582  RKWKKGVGKGNKSLDGMESYNLPFGMNIIKKYRCFSYLPISPTF 625
>sp|O32140|PUCK_BACSU Uric acid permease pucK
          Length = 430

 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
 Frame = +1

Query: 37  INRGIFIEGIGVFLSGFLGAVSCPTSYSGNIGLMKITKAGNVRIGQVTAFIMILFGIFPV 216
           + +G   EG+ + L G   A    T++S N+G+++++K  +V +  +T  I++  G+ P 
Sbjct: 268 LEKGYRAEGLAILLGGLFNAFPY-TAFSQNVGIVQLSKMKSVNVIAITGIILVAIGLVPK 326

Query: 217 FGALFVSIPDPAVGGVLFIVCLLVLGCAINNFQYIDMYSTRNIVIYGFSVSFGL---TFP 387
             AL   IP P +GG + ++  +V+   I     +D+ S  N++I   SVS GL   T P
Sbjct: 327 AAALTTVIPTPVLGGAMIVMFGMVISYGIKMLSSVDLDSQGNLLIIASSVSLGLGATTVP 386

Query: 388 TWCSS 402
              SS
Sbjct: 387 ALFSS 391
>sp|P50487|Y397_CLOPE Putative purine permease CPE0397
          Length = 452

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
 Frame = +1

Query: 46  GIFIEGIGVFLSGFLGAVSCP-TSYSGNIGLMKITKAGNVRIGQVTAFIMILFGIFPVFG 222
           G+  +G+G  L G +G  SCP TS+S NIG++ +TK  +  +  +   ++++ G  P   
Sbjct: 286 GVLSDGVGSALGGLVG--SCPNTSFSQNIGIISLTKVASRHVAVMAGILLVILGFLPKVA 343

Query: 223 ALFVSIPDPAVGGVLFIVCLLVLGCAINNFQYIDMYSTRNIVIYGFSVSFGL 378
           A+   IP+P +GGV  ++   V    I     I + + RN++I   S+  GL
Sbjct: 344 AIITGIPNPVLGGVGIMMFGTVAAAGIRTLSNIKL-TERNLLIIAISMGLGL 394
>sp|Q46821|YGFU_ECOLI Putative purine permease ygfU
          Length = 482

 Score = 63.2 bits (152), Expect = 9e-10
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
 Frame = +1

Query: 19  KVPQFAINRGIFIEGIGVFLSGFLGAVSCPTSYSGNIGLMKITKAGNVRIGQVTAFIMIL 198
           K+    I RG+ ++G+G  + G   +    TS+S N+GL+ +T+  +  +   +  I+IL
Sbjct: 285 KLSSHDIIRGLRVDGVGTMIGGTFNSFP-HTSFSQNVGLVSVTRVHSRWVCISSGIILIL 343

Query: 199 FGIFPVFGALFVSIPDPAVGGVLFIVCLLVLGCAINNFQYIDMYSTR-NIVIYGFSVSFG 375
           FG+ P    L  SIP   +GG   ++  +VL   I      +  + R N+ I   S+  G
Sbjct: 344 FGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVG 403

Query: 376 LTFPTWCSSHLDLLTVGYQPIDEVIHILLTIHLFIAAVTAIFLDNVLPGYYY 531
           +T PT        L    QP       LL   + +A ++A+ L+    GY +
Sbjct: 404 MT-PTLSHDFFSKLPAVLQP-------LLHSGIMLATLSAVVLNVFFNGYQH 447
>sp|P42086|PBUX_BACSU Xanthine permease
          Length = 438

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 35/120 (29%), Positives = 59/120 (49%)
 Frame = +1

Query: 19  KVPQFAINRGIFIEGIGVFLSGFLGAVSCPTSYSGNIGLMKITKAGNVRIGQVTAFIMIL 198
           ++ +  +++G   EG+ V L G   A    T++S N+GL+++T      +  VT  I++ 
Sbjct: 260 RLTEIDLSKGYRAEGLAVLLGGIFNAFPY-TAFSQNVGLVQLTGIKKNAVIVVTGVILMA 318

Query: 199 FGIFPVFGALFVSIPDPAVGGVLFIVCLLVLGCAINNFQYIDMYSTRNIVIYGFSVSFGL 378
           FG+FP   A    IP   +GG +  +  +V+   I     ID     N++I   SV  GL
Sbjct: 319 FGLFPKIAAFTTIIPSAVLGGAMVAMFGMVIAYGIKMLSRIDFAKQENLLIVACSVGLGL 378
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,803,309
Number of Sequences: 369166
Number of extensions: 2051987
Number of successful extensions: 5563
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5557
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8550075140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)