Planaria EST Database


DrC_02250

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02250
         (808 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9XZ58|CSN5_DROME  COP9 signalosome complex subunit 5 (Si...   357   2e-98
sp|Q6P635|CSN5_XENTR  COP9 signalosome complex subunit 5 (Si...   353   2e-97
sp|Q6GLM9|CSN5_XENLA  COP9 signalosome complex subunit 5 (Si...   353   3e-97
sp|Q6PC30|CSN5_BRARE  COP9 signalosome complex subunit 5 (Si...   353   4e-97
sp|Q92905|CSN5_HUMAN  COP9 signalosome complex subunit 5 (Si...   352   5e-97
sp|O35864|CSN5_MOUSE  COP9 signalosome complex subunit 5 (Si...   352   5e-97
sp|Q9FVU9|CSN5A_ARATH  COP9 signalosome complex subunit 5a (...   331   1e-90
sp|Q8LAZ7|CSN5B_ARATH  COP9 signalosome complex subunit 5b (...   325   7e-89
sp|P91001|CSN5_CAEEL  COP9 signalosome complex subunit 5 (Si...   323   3e-88
sp|O94454|CSN5_SCHPO  COP9 signalosome complex subunit 5 (CS...   228   1e-59
>sp|Q9XZ58|CSN5_DROME COP9 signalosome complex subunit 5 (Signalosome subunit 5) (Dch5)
           (JAB1 homolog)
          Length = 327

 Score =  357 bits (917), Expect = 2e-98
 Identities = 160/236 (67%), Positives = 199/236 (84%), Gaps = 2/236 (0%)
 Frame = +1

Query: 55  QSWELENNVVTIN--DDLFRYDINAHNSIVKSKPWVKDVHYFKYIRVSAHALLKMVTHAR 228
           ++WELENN+ T+   D++FRYD      I+ +KPW KD H+FK I++SA ALLKMV HAR
Sbjct: 8   KTWELENNIQTLPSCDEIFRYDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHAR 67

Query: 229 RGGNLEVMGMLFGKVTHNTMIVMDSVALPVEGTETRVNAQSEAYEFITMYKDTVAKIGRT 408
            GG LEVMG++ GKV  NTMIVMD+ ALPVEGTETRVNAQ++AYE++T Y +   ++GR 
Sbjct: 68  SGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRM 127

Query: 409 ENVIGWYHSHPGYGCWLSGIDVTTQTMNQTYQDPFVAVVLDPVRTVSSGKVNIGAFRTYP 588
           E+ +GWYHSHPGYGCWLSGIDV+TQ +NQTYQ+PFVA+V+DPVRTVS+GKV +GAFRTYP
Sbjct: 128 EHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYP 187

Query: 589 RNYSPPDQGPSEYQSIPLNKIEDFGVHCKQYYPLIMSYFKSSLDKAILDILWNRYW 756
           + Y PP++ PSEYQ+IPLNKIEDFGVHCKQYYPL +SYFKS+LD+ +LD LWN+YW
Sbjct: 188 KGYKPPNEEPSEYQTIPLNKIEDFGVHCKQYYPLEISYFKSALDRRLLDSLWNKYW 243
>sp|Q6P635|CSN5_XENTR COP9 signalosome complex subunit 5 (Signalosome subunit 5)
          Length = 334

 Score =  353 bits (907), Expect = 2e-97
 Identities = 159/251 (63%), Positives = 197/251 (78%), Gaps = 2/251 (0%)
 Frame = +1

Query: 55  QSWELENNVVTIN--DDLFRYDINAHNSIVKSKPWVKDVHYFKYIRVSAHALLKMVTHAR 228
           ++WEL NN+  +   D++++YD      I+ +KPW KD HYFKY +VSA ALLKMV HAR
Sbjct: 11  KTWELSNNMQEVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHAR 70

Query: 229 RGGNLEVMGMLFGKVTHNTMIVMDSVALPVEGTETRVNAQSEAYEFITMYKDTVAKIGRT 408
            GGNLEVMG++ GKV   TMI+MDS ALPVEGTETRVNAQ+ AYE++  Y +   ++GR 
Sbjct: 71  SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRL 130

Query: 409 ENVIGWYHSHPGYGCWLSGIDVTTQTMNQTYQDPFVAVVLDPVRTVSSGKVNIGAFRTYP 588
           EN IGWYHSHPGYGCWLSGIDV+TQ +NQ +Q+PFVAVV+DP RT+S+GKVN+GAFRTYP
Sbjct: 131 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYP 190

Query: 589 RNYSPPDQGPSEYQSIPLNKIEDFGVHCKQYYPLIMSYFKSSLDKAILDILWNRYWXXXX 768
           + Y PPD+GPSEYQ+IPLNKIEDFGVHCKQYY L ++YFKSSLD+ +L++LWN+YW    
Sbjct: 191 KGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVTYFKSSLDRKLLELLWNKYWVNTL 250

Query: 769 XXXXXXXQPDY 801
                    DY
Sbjct: 251 SSSSLLTNADY 261
>sp|Q6GLM9|CSN5_XENLA COP9 signalosome complex subunit 5 (Signalosome subunit 5)
          Length = 332

 Score =  353 bits (906), Expect = 3e-97
 Identities = 157/236 (66%), Positives = 195/236 (82%), Gaps = 2/236 (0%)
 Frame = +1

Query: 55  QSWELENNVVTIN--DDLFRYDINAHNSIVKSKPWVKDVHYFKYIRVSAHALLKMVTHAR 228
           ++WEL NN+  +   D++++YD      I+ +KPW KD HYFKY +VSA ALLKMV HAR
Sbjct: 9   KTWELSNNMQEVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKVSALALLKMVMHAR 68

Query: 229 RGGNLEVMGMLFGKVTHNTMIVMDSVALPVEGTETRVNAQSEAYEFITMYKDTVAKIGRT 408
            GGNLEVMG++ GKV   TMI+MDS ALPVEGTETRVNAQ+ AYE++  Y +   ++GR 
Sbjct: 69  SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRL 128

Query: 409 ENVIGWYHSHPGYGCWLSGIDVTTQTMNQTYQDPFVAVVLDPVRTVSSGKVNIGAFRTYP 588
           EN IGWYHSHPGYGCWLSGIDV+TQ +NQ +Q+PFVAVV+DP RT+S+GKVN+GAFRTYP
Sbjct: 129 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYP 188

Query: 589 RNYSPPDQGPSEYQSIPLNKIEDFGVHCKQYYPLIMSYFKSSLDKAILDILWNRYW 756
           + Y PPD+GPSEYQ+IPLNKIEDFGVHCKQYY L ++YFKSSLD+ +L++LWN+YW
Sbjct: 189 KGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVTYFKSSLDRKLLELLWNKYW 244
>sp|Q6PC30|CSN5_BRARE COP9 signalosome complex subunit 5 (Signalosome subunit 5)
          Length = 334

 Score =  353 bits (905), Expect = 4e-97
 Identities = 158/253 (62%), Positives = 199/253 (78%), Gaps = 2/253 (0%)
 Frame = +1

Query: 49  SLQSWELENNVVTIN--DDLFRYDINAHNSIVKSKPWVKDVHYFKYIRVSAHALLKMVTH 222
           ++++WEL N++  +   D++++YD      I+ +KPW KD HYFKY ++SA ALLKMV H
Sbjct: 7   AMKTWELSNSMQEVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKLSALALLKMVMH 66

Query: 223 ARRGGNLEVMGMLFGKVTHNTMIVMDSVALPVEGTETRVNAQSEAYEFITMYKDTVAKIG 402
           AR GGNLEVMG++ GKV   TMI+MDS ALPVEGTETRVNAQ+ AYE++  Y +   ++G
Sbjct: 67  ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 126

Query: 403 RTENVIGWYHSHPGYGCWLSGIDVTTQTMNQTYQDPFVAVVLDPVRTVSSGKVNIGAFRT 582
           R EN IGWYHSHPGYGCWLSGIDV+TQ +NQ +Q+PFVAVV+DP RT+S+GKVN+GAFRT
Sbjct: 127 RLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRT 186

Query: 583 YPRNYSPPDQGPSEYQSIPLNKIEDFGVHCKQYYPLIMSYFKSSLDKAILDILWNRYWXX 762
           YP+ Y PPD+GPSEYQ+IPLNKIEDFGVHCKQYY L +SYFKSSLD+ +L++LWN+YW  
Sbjct: 187 YPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVN 246

Query: 763 XXXXXXXXXQPDY 801
                      DY
Sbjct: 247 TLSSSSLLTNADY 259
>sp|Q92905|CSN5_HUMAN COP9 signalosome complex subunit 5 (Signalosome subunit 5) (SGN5)
           (Jun activation domain-binding protein 1)
          Length = 334

 Score =  352 bits (904), Expect = 5e-97
 Identities = 159/251 (63%), Positives = 196/251 (78%), Gaps = 2/251 (0%)
 Frame = +1

Query: 55  QSWELENNVVTIN--DDLFRYDINAHNSIVKSKPWVKDVHYFKYIRVSAHALLKMVTHAR 228
           ++WEL NN+      D++++YD      I+ +KPW KD HYFKY ++SA ALLKMV HAR
Sbjct: 11  KTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHAR 70

Query: 229 RGGNLEVMGMLFGKVTHNTMIVMDSVALPVEGTETRVNAQSEAYEFITMYKDTVAKIGRT 408
            GGNLEVMG++ GKV   TMI+MDS ALPVEGTETRVNAQ+ AYE++  Y +   ++GR 
Sbjct: 71  SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRL 130

Query: 409 ENVIGWYHSHPGYGCWLSGIDVTTQTMNQTYQDPFVAVVLDPVRTVSSGKVNIGAFRTYP 588
           EN IGWYHSHPGYGCWLSGIDV+TQ +NQ +Q+PFVAVV+DP RT+S+GKVN+GAFRTYP
Sbjct: 131 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYP 190

Query: 589 RNYSPPDQGPSEYQSIPLNKIEDFGVHCKQYYPLIMSYFKSSLDKAILDILWNRYWXXXX 768
           + Y PPD+GPSEYQ+IPLNKIEDFGVHCKQYY L +SYFKSSLD+ +L++LWN+YW    
Sbjct: 191 KGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTL 250

Query: 769 XXXXXXXQPDY 801
                    DY
Sbjct: 251 SSSSLLTNADY 261
>sp|O35864|CSN5_MOUSE COP9 signalosome complex subunit 5 (Signalosome subunit 5) (SGN5)
           (Jun activation domain-binding protein 1) (Kip1
           C-terminus-interacting protein 2)
          Length = 334

 Score =  352 bits (904), Expect = 5e-97
 Identities = 159/251 (63%), Positives = 196/251 (78%), Gaps = 2/251 (0%)
 Frame = +1

Query: 55  QSWELENNVVTIN--DDLFRYDINAHNSIVKSKPWVKDVHYFKYIRVSAHALLKMVTHAR 228
           ++WEL NN+      D++++YD      I+ +KPW KD HYFKY ++SA ALLKMV HAR
Sbjct: 11  KTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHAR 70

Query: 229 RGGNLEVMGMLFGKVTHNTMIVMDSVALPVEGTETRVNAQSEAYEFITMYKDTVAKIGRT 408
            GGNLEVMG++ GKV   TMI+MDS ALPVEGTETRVNAQ+ AYE++  Y +   ++GR 
Sbjct: 71  SGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRL 130

Query: 409 ENVIGWYHSHPGYGCWLSGIDVTTQTMNQTYQDPFVAVVLDPVRTVSSGKVNIGAFRTYP 588
           EN IGWYHSHPGYGCWLSGIDV+TQ +NQ +Q+PFVAVV+DP RT+S+GKVN+GAFRTYP
Sbjct: 131 ENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYP 190

Query: 589 RNYSPPDQGPSEYQSIPLNKIEDFGVHCKQYYPLIMSYFKSSLDKAILDILWNRYWXXXX 768
           + Y PPD+GPSEYQ+IPLNKIEDFGVHCKQYY L +SYFKSSLD+ +L++LWN+YW    
Sbjct: 191 KGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTL 250

Query: 769 XXXXXXXQPDY 801
                    DY
Sbjct: 251 SSSSLLTNADY 261
>sp|Q9FVU9|CSN5A_ARATH COP9 signalosome complex subunit 5a (Signalosome subunit 5a) (Jun
           activation domain-binding homolog 2)
          Length = 358

 Score =  331 bits (849), Expect = 1e-90
 Identities = 152/257 (59%), Positives = 193/257 (75%), Gaps = 6/257 (2%)
 Frame = +1

Query: 55  QSWELENNVVTIN------DDLFRYDINAHNSIVKSKPWVKDVHYFKYIRVSAHALLKMV 216
           ++WELEN+++T++      D++F YD  +     + KPW  D HYFK +++SA ALLKMV
Sbjct: 11  KTWELENSILTVDSPDSTSDNIFYYDDTSQTRFQQEKPWENDPHYFKRVKISALALLKMV 70

Query: 217 THARRGGNLEVMGMLFGKVTHNTMIVMDSVALPVEGTETRVNAQSEAYEFITMYKDTVAK 396
            HAR GG +E+MG++ GK   +T+IVMD+ ALPVEGTETRVNAQ +AYE++  Y  T   
Sbjct: 71  VHARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVNAQDDAYEYMVEYSQTNKL 130

Query: 397 IGRTENVIGWYHSHPGYGCWLSGIDVTTQTMNQTYQDPFVAVVLDPVRTVSSGKVNIGAF 576
            GR ENV+GWYHSHPGYGCWLSGIDV+TQ +NQ +Q+PF+AVV+DP RTVS+GKV IGAF
Sbjct: 131 AGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTRTVSAGKVEIGAF 190

Query: 577 RTYPRNYSPPDQGPSEYQSIPLNKIEDFGVHCKQYYPLIMSYFKSSLDKAILDILWNRYW 756
           RTY + Y PPD+  SEYQ+IPLNKIEDFGVHCKQYY L ++YFKSSLD  +LD+LWN+YW
Sbjct: 191 RTYSKGYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYSLDVTYFKSSLDSHLLDLLWNKYW 250

Query: 757 XXXXXXXXXXXQPDYMA 807
                        DY+A
Sbjct: 251 VNTLSSSPLLGNGDYVA 267
>sp|Q8LAZ7|CSN5B_ARATH COP9 signalosome complex subunit 5b (Signalosome subunit 5b) (Jun
           activation domain-binding homolog 1)
          Length = 357

 Score =  325 bits (834), Expect = 7e-89
 Identities = 152/257 (59%), Positives = 189/257 (73%), Gaps = 6/257 (2%)
 Frame = +1

Query: 55  QSWELENNVVTI------NDDLFRYDINAHNSIVKSKPWVKDVHYFKYIRVSAHALLKMV 216
           ++WELENN++ +      +D +F YD  +   I + KPW  D +YFK + +SA ALLKMV
Sbjct: 11  KTWELENNILPVEPTDSASDSIFHYDDASQAKIQQEKPWASDPNYFKRVHISALALLKMV 70

Query: 217 THARRGGNLEVMGMLFGKVTHNTMIVMDSVALPVEGTETRVNAQSEAYEFITMYKDTVAK 396
            HAR GG +E+MG++ GK   +T+IVMD+ ALPVEGTETRVNAQS+AYE++  Y  T   
Sbjct: 71  VHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKL 130

Query: 397 IGRTENVIGWYHSHPGYGCWLSGIDVTTQTMNQTYQDPFVAVVLDPVRTVSSGKVNIGAF 576
            GR ENV+GWYHSHPGYGCWLSGIDV+TQ +NQ YQ+PF+AVV+DP RTVS+GKV IGAF
Sbjct: 131 AGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAF 190

Query: 577 RTYPRNYSPPDQGPSEYQSIPLNKIEDFGVHCKQYYPLIMSYFKSSLDKAILDILWNRYW 756
           RTYP  +   D   SEYQ+IPLNKIEDFGVHCKQYY L ++YFKSSLD  +LD+LWN+YW
Sbjct: 191 RTYPEGHKISDDHVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYW 250

Query: 757 XXXXXXXXXXXQPDYMA 807
                        DY+A
Sbjct: 251 VNTLSSSPLLGNGDYVA 267
>sp|P91001|CSN5_CAEEL COP9 signalosome complex subunit 5 (Signalosome subunit 5) (JAB1
           homolog)
          Length = 368

 Score =  323 bits (828), Expect = 3e-88
 Identities = 148/234 (63%), Positives = 185/234 (79%)
 Frame = +1

Query: 55  QSWELENNVVTINDDLFRYDINAHNSIVKSKPWVKDVHYFKYIRVSAHALLKMVTHARRG 234
           ++WE ENNV  + D +F Y+      I  +KPW KD HYFK I++SA ALLKM  HA+RG
Sbjct: 15  RNWEKENNVQNV-DSIFEYNNKQQVEIRNAKPWDKDPHYFKQIKISAIALLKMTMHAKRG 73

Query: 235 GNLEVMGMLFGKVTHNTMIVMDSVALPVEGTETRVNAQSEAYEFITMYKDTVAKIGRTEN 414
           GNLE+MG+L G++  N+ I++D  ALPVEGTETRVNAQ++AYE++T+Y +     GR E 
Sbjct: 74  GNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQAQAYEYMTVYSEMCDTEGRKEK 133

Query: 415 VIGWYHSHPGYGCWLSGIDVTTQTMNQTYQDPFVAVVLDPVRTVSSGKVNIGAFRTYPRN 594
           V+GWYHSHPGYGCWLSGIDV+TQT+NQ +Q+P+VA+V+DP+RT+S+GKV+IGAFRTYP  
Sbjct: 134 VVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLRTMSAGKVDIGAFRTYPEG 193

Query: 595 YSPPDQGPSEYQSIPLNKIEDFGVHCKQYYPLIMSYFKSSLDKAILDILWNRYW 756
           Y PPD  PSEYQSIPL KIEDFGVHCK+YY L +S+FKS LD  IL  LWN YW
Sbjct: 194 YRPPDDVPSEYQSIPLAKIEDFGVHCKRYYSLDVSFFKSQLDAHILTSLWNSYW 247
>sp|O94454|CSN5_SCHPO COP9 signalosome complex subunit 5 (CSN complex subunit 5) (SGN5)
          Length = 299

 Score =  228 bits (582), Expect = 1e-59
 Identities = 112/227 (49%), Positives = 148/227 (65%), Gaps = 6/227 (2%)
 Frame = +1

Query: 94  DDLFRYDINAHNSIVKSKPWVKDVHYFKYIRVSAHALLKMVTHARRGGNLEVMGMLFGKV 273
           +++FR+D     + ++  PW  D  +F+ +++SA ALLKM+ H  +G  LEVMG + GKV
Sbjct: 6   ENVFRFDEEKERAKIRESPWKHDPEFFRSVKISAVALLKMLRHVSQGMPLEVMGYVQGKV 65

Query: 274 THNTMIVMDSVALPVEGTETRVNAQSEAYEFITMYKDTVAKIGRTENVIGWYHSHPGYGC 453
              ++I++DS ALPVEGTETRVNA  EA E+   Y      + R ENVIGWYHSHP YGC
Sbjct: 66  EGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVIGWYHSHPNYGC 125

Query: 454 WLSGIDVTTQTMNQTYQDPFVAVVLDPVRTVSSGKVNIGAFRTYPRNYSPPDQGPSE--- 624
           WLSG+DV TQ  NQ YQDPFVAVVLDP R++ S  VNIGAFRTYP       +  S    
Sbjct: 126 WLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFRTYPVGNDGSIRTKSRHHP 185

Query: 625 ---YQSIPLNKIEDFGVHCKQYYPLIMSYFKSSLDKAILDILWNRYW 756
              ++++P +KIED G H + YY L ++YF S  +K + + L NR W
Sbjct: 186 SVLFKNLPSSKIEDAGAHAEAYYSLPITYFHSKAEKKVTEFLRNRNW 232
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,594,795
Number of Sequences: 369166
Number of extensions: 1970531
Number of successful extensions: 4546
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4526
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7666799535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)