Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02152
(849 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q20799|CMC2_CAEEL Probable calcium-binding mitochondrial... 200 5e-51
sp|Q19529|CMC3_CAEEL Probable calcium-binding mitochondrial... 197 2e-50
sp|P48233|CMC1_YEAST Calcium-binding mitochondrial carrier ... 96 1e-19
sp|Q01888|GDC_BOVIN Grave's disease carrier protein (GDC) (... 82 1e-15
sp|P16261|GDC_RAT Grave'S disease carrier protein (GDC) (Mi... 79 2e-14
sp|P16260|GDC_HUMAN Grave's disease carrier protein (GDC) (... 75 3e-13
sp|O13805|YE08_SCHPO Putative mitochondrial carrier C17H9.08 74 4e-13
sp|P04709|ADT1_MAIZE ADP,ATP carrier protein 1, mitochondri... 64 7e-10
sp|P12857|ADT2_MAIZE ADP,ATP carrier protein 2, mitochondri... 62 2e-09
sp|Q27238|ADT_ANOGA ADP,ATP carrier protein (ADP/ATP transl... 62 3e-09
>sp|Q20799|CMC2_CAEEL Probable calcium-binding mitochondrial carrier F55A11.4
Length = 588
Score = 200 bits (508), Expect = 5e-51
Identities = 100/262 (38%), Positives = 160/262 (61%)
Frame = +1
Query: 28 IMSLMNSTDQNADNKVSFEEFLDFVQNREIQLKLAFKQMDKNNDNKISADEIQITMKELG 207
IMS M+ D+ +V F F +V E +L F MD+N+D + E++ K++G
Sbjct: 117 IMSKMSPDDEG---RVDFYSFSSYVLENEQKLAEMFADMDRNHDGLVDVVEMKNYCKDIG 173
Query: 208 INIGIEEAEQLLSQMDKDNNLNIDYDEWRNFLVLSNARDMKDIIKFWRKSFSIDLGENMT 387
+ + +A+ ++++MD+ + ++D E++ F++L + D+KDI+ FWR + ID+GE+
Sbjct: 174 VPLDDHKAQHIVNKMDQTGSASVDLKEFQEFMMLYPSSDLKDIVDFWRHNLIIDIGEDSQ 233
Query: 388 IPDDFTPEEKSKGVAWKTLVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAANHGIINTIK 567
IP+DF+ +E +G+ W+ LVAGG AG VSRT TAP DR+KV +Q + K G+++ +K
Sbjct: 234 IPEDFSQQEMQEGIWWRHLVAGGAAGAVSRTCTAPFDRIKVYLQVNSSKTNRLGVMSCLK 293
Query: 568 YMIKEGGLSALWRGNGVNCIKIAPESAIKFLAYEWYKKVIVEITKNKTGEVTLMEKFSXX 747
+ EGG+ + WRGNG+N IKIAPESAIKF+ Y+ K++I + K E++ E+
Sbjct: 294 LLHAEGGIKSFWRGNGINVIKIAPESAIKFMCYDQLKRLIQK--KKGNEEISTFERLCAG 351
Query: 748 XXXXXXXXXXIYPMEVLKQECA 813
IYPMEV+K A
Sbjct: 352 SAAGAISQSTIYPMEVMKTRLA 373
Score = 30.8 bits (68), Expect = 5.0
Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 442 LVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAAN---HGIINTIKYMIKEGGLSALWRGN 612
L G + + ++ P ++ +QA + + + KY+++ G++ +RG
Sbjct: 446 LACGTCSSTCGQLSSYPFALVRTRLQALSITRYSPQPDTMFGQFKYILQNEGVTGFYRGI 505
Query: 613 GVNCIKIAPESAIKFLAYE 669
N +K+ P +I ++ YE
Sbjct: 506 TPNFLKVIPAVSISYVVYE 524
>sp|Q19529|CMC3_CAEEL Probable calcium-binding mitochondrial carrier F17E5.2
Length = 531
Score = 197 bits (502), Expect = 2e-50
Identities = 94/262 (35%), Positives = 162/262 (61%)
Frame = +1
Query: 37 LMNSTDQNADNKVSFEEFLDFVQNREIQLKLAFKQMDKNNDNKISADEIQITMKELGINI 216
L+ ++V++ +F ++V E +L F ++D N+D ++ EI+ KE+G+N+
Sbjct: 113 LLERMKSEHSDRVTYADFTNYVIAHEARLAEVFDKIDLNSDGEVDMAEIKSYCKEMGVNL 172
Query: 217 GIEEAEQLLSQMDKDNNLNIDYDEWRNFLVLSNARDMKDIIKFWRKSFSIDLGENMTIPD 396
++A ++ +MD+ + +++ +E+++F++L + DM+D++ FWR + ID+GE+ +P+
Sbjct: 173 DDQKAMSIVKKMDQSGSSSVNLNEFQDFMLLYPSTDMRDMVDFWRHNLIIDIGEDGQVPE 232
Query: 397 DFTPEEKSKGVAWKTLVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAANHGIINTIKYMI 576
DFTP+E GV W+ LVAGG+AG +SRT TAP DR+KV +Q + K G+++ + +
Sbjct: 233 DFTPQELLSGVWWRHLVAGGVAGAMSRTCTAPFDRIKVYLQVNSTKTNKLGVVSCVHLLH 292
Query: 577 KEGGLSALWRGNGVNCIKIAPESAIKFLAYEWYKKVIVEITKNKTGEVTLMEKFSXXXXX 756
EGG+ + WRGNG+N IKIAPESA+KF+ Y+ K+ + E E++ +E+
Sbjct: 293 AEGGIKSFWRGNGINVIKIAPESAMKFMCYDQIKRWMQEYKGG--AELSTIERLLAGSSA 350
Query: 757 XXXXXXXIYPMEVLKQECAFVR 822
IYPMEV+K A R
Sbjct: 351 GAISQTAIYPMEVMKTRLALRR 372
Score = 37.7 bits (86), Expect = 0.041
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 442 LVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAANHG----IINTIKYMIKEGGLSALWRG 609
L G + + A+ PL ++ +QA + N ++ K++++ G + L+RG
Sbjct: 441 LACGTCSSTCGQLASYPLALVRTRLQARAISPKNSTQPDTMVGQFKHILQTEGFTGLYRG 500
Query: 610 NGVNCIKIAPESAIKFLAYEWYKK 681
N +K+ P +I ++ YE +K
Sbjct: 501 ITPNFMKVIPAVSISYVVYEKVRK 524
>sp|P48233|CMC1_YEAST Calcium-binding mitochondrial carrier SAL1 (Suppressor of AAC2
lethality)
Length = 545
Score = 96.3 bits (238), Expect = 1e-19
Identities = 81/332 (24%), Positives = 142/332 (42%), Gaps = 68/332 (20%)
Frame = +1
Query: 10 KEMENEIMSLMNSTDQNADNKVSFEEFLDFVQNREIQLKLAFKQMDKNNDNKISADEIQ- 186
K + I L + D N D+ V +F + N E Q+ F+++D ++D KI +EI
Sbjct: 48 KGNDEAIKMLFTAMDVNKDSVVDLSDFKKYASNAESQIWNGFQRIDLDHDGKIGINEINR 107
Query: 187 ---------ITMKELGINIGIEEAEQLL------------------------------SQ 249
I EL + E+ + S+
Sbjct: 108 YLSDLDNQSICNNELNHELSNEKVNKFSRFFEWAFPKRKANIALRGQASHKKNTDNDRSK 167
Query: 250 MDKDNNLNIDYDEWRNFLVL----SNARDMKDIIKFWRKSFSIDLGE--NMTIPDDFTPE 411
D++L + YD+WR+FL+L +R F+ + +DL ++T+ +DF
Sbjct: 168 KTTDSDLYVTYDQWRDFLLLVPRKQGSRLHTAYSYFYLFNEDVDLSSEGDVTLINDFI-- 225
Query: 412 EKSKGVAWKTLVAGGIAGCVSRTATAPLDRLKVTMQAH---------------------G 528
+G + +AGGI+G +SRT TAP DRLKV + A
Sbjct: 226 ---RGFGF--FIAGGISGVISRTCTAPFDRLKVFLIARTDLSSILLNSKTDLLAKNPNAD 280
Query: 529 VKAANHGIINTIKYMIKEGGLSALWRGNGVNCIKIAPESAIKFLAYEWYKKVIVEITK-N 705
+ + + +K + ++GG+ A + GNG+N IK+ PES+IKF ++E KK++ ++
Sbjct: 281 INKISSPLAKAVKSLYRQGGIKAFYVGNGLNVIKVFPESSIKFGSFEVTKKIMTKLEGCR 340
Query: 706 KTGEVTLMEKFSXXXXXXXXXXXXIYPMEVLK 801
T +++ + +YP++ LK
Sbjct: 341 DTKDLSKFSTYIAGGLAGMAAQFSVYPIDTLK 372
Score = 45.8 bits (107), Expect = 1e-04
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +1
Query: 433 WKTLVAGGIAGCVSRTATAPLDRLKVTMQAHGVKA---ANHGIINTIKYMIKEGGLSALW 603
+ T +AGG+AG ++ + P+D LK +Q + N+ + T K M +EGG+ +
Sbjct: 348 FSTYIAGGLAGMAAQFSVYPIDTLKFRVQCAPLDTKLKGNNLLFQTAKDMFREGGVRLFY 407
Query: 604 RGNGVNCIKIAPESAIKFLAYEWYKK 681
RG V + I P +A+ + KK
Sbjct: 408 RGVTVGIVGIFPYAALDLGTFSALKK 433
>sp|Q01888|GDC_BOVIN Grave's disease carrier protein (GDC) (Mitochondrial solute carrier
protein homolog)
Length = 330
Score = 82.4 bits (202), Expect = 1e-15
Identities = 46/139 (33%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Frame = +1
Query: 436 KTLVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAANHGIINTIKYMIKEGGLSALWRGNG 615
++ +AGGIAGC ++T APLDR+KV +QAH + G+ +T++ + K+ G L++GNG
Sbjct: 36 RSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNHHYRHLGVFSTLRAVPKKEGYLGLYKGNG 95
Query: 616 VNCIKIAPESAIKFLAYEWYKKVIVEITKNKTGEVTLMEKFSXXXXXXXXXXXXIYPMEV 795
I+I P AI+F+A+E YK +I K G + + YP+++
Sbjct: 96 AMMIRIFPYGAIQFMAFEHYKTLIT----TKLGVSGHVHRLMAGSMAGMTAVICTYPLDM 151
Query: 796 LKQECAF-VRAVNTHQYLI 849
++ AF V+ +T+ +I
Sbjct: 152 VRVRLAFQVKGEHTYTGII 170
Score = 43.5 bits (101), Expect = 7e-04
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 442 LVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAANHGIIN---TIKYMIKEGGL-SALWRG 609
L+ GG+AG +++T + P D + MQ V + T+KY+ G+ L+RG
Sbjct: 242 LLCGGVAGAIAQTISYPFDVTRRRMQLGAVLPEFEKCLTMRETMKYVYGHHGIRKGLYRG 301
Query: 610 NGVNCIKIAPESAIKFLAYEWYKK 681
+N I+ P A+ F YE K+
Sbjct: 302 LSLNYIRCVPSQAVAFTTYELMKQ 325
Score = 38.9 bits (89), Expect = 0.018
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +1
Query: 442 LVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAANH--GIINTIKYMI-KEGGLSALWRGN 612
L+AG +AG + T PLD ++V + A VK + GII+ K + KEGG +RG
Sbjct: 132 LMAGSMAGMTAVICTYPLDMVRVRL-AFQVKGEHTYTGIIHAFKTIYAKEGGFLGFYRGL 190
Query: 613 GVNCIKIAPESAIKFLAYEWYKKV 684
+ +AP + + F + K V
Sbjct: 191 MPTILGMAPYAGVSFFTFGTLKSV 214
>sp|P16261|GDC_RAT Grave'S disease carrier protein (GDC) (Mitochondrial solute carrier
protein homolog)
Length = 322
Score = 78.6 bits (192), Expect = 2e-14
Identities = 47/140 (33%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Frame = +1
Query: 436 KTLVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAANHGIINTIKYMIKEGGLSALWRGNG 615
++ +AG IAGC ++T APLDR+KV +QAH + G+++ ++ + ++ G L++GNG
Sbjct: 38 RSFLAGSIAGCCAKTTVAPLDRVKVLLQAHNHHYKHLGVLSPLRAVPQKEGYLGLYKGNG 97
Query: 616 VNCIKIAPESAIKFLAYEWYKKVIVEITK-NKTGEVTLMEKFSXXXXXXXXXXXXIYPME 792
I+I P AI+F+A+E YK I TK +G V + S YP++
Sbjct: 98 AMMIRIFPYGAIQFMAFEHYKTFIT--TKLGVSGHVHRLMAGSMAGKMSMTAVICTYPLD 155
Query: 793 VLKQECAF-VRAVNTHQYLI 849
V++ AF V+ +T+ +I
Sbjct: 156 VVRVRLAFQVKGEHTYSGII 175
Score = 39.3 bits (90), Expect = 0.014
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +1
Query: 442 LVAGGIAGCVSRTA---TAPLD--RLKVTMQAHGVKAANHGIINTIKYMI-KEGGLSALW 603
L+AG +AG +S TA T PLD R+++ Q G + GII+ K + KEGG +
Sbjct: 134 LMAGSMAGKMSMTAVICTYPLDVVRVRLAFQVKGEHTYS-GIIHAFKTIYAKEGGFLGFY 192
Query: 604 RGNGVNCIKIAPESAIKFLAYEWYKKV 684
RG + +AP +++ F + K V
Sbjct: 193 RGLMPTILGMAPYASVSFFTFGTLKSV 219
Score = 34.3 bits (77), Expect = 0.45
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +1
Query: 442 LVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAANHGII---NTIKYMIKEGGL-SALWRG 609
L+ GG+A +++T + P D + MQ V + T+KY+ G+ L+RG
Sbjct: 247 LLCGGVARAIAQTISYPFDVTRRRMQLGAVLPEFEKCLTMRETMKYVYGHHGIRRGLYRG 306
Query: 610 NGVNCIKIAPESAIKF 657
+N I+ P A+ F
Sbjct: 307 LSLNYIRCIPSQAVAF 322
>sp|P16260|GDC_HUMAN Grave's disease carrier protein (GDC) (Grave's disease autoantigen)
(GDA) (Mitochondrial solute carrier protein homolog)
Length = 332
Score = 74.7 bits (182), Expect = 3e-13
Identities = 34/84 (40%), Positives = 56/84 (66%)
Frame = +1
Query: 436 KTLVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAANHGIINTIKYMIKEGGLSALWRGNG 615
++ +AG IAGC ++T APLDR+KV +QAH + G+ + ++ + ++ G L++GNG
Sbjct: 38 RSFLAGSIAGCCAKTTVAPLDRVKVLLQAHNHHYKHLGVFSALRAVPQKEGFLGLYKGNG 97
Query: 616 VNCIKIAPESAIKFLAYEWYKKVI 687
I+I P AI+F+A+E YK +I
Sbjct: 98 AMMIRIFPYGAIQFMAFEHYKTLI 121
Score = 38.5 bits (88), Expect = 0.024
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +1
Query: 442 LVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAANH--GIINTIKYMI-KEGGLSALWRGN 612
L+AG +AG + T P+D ++V + A VK + GII+ K + KEGG +RG
Sbjct: 134 LMAGSMAGMTAVICTDPVDMVRVRL-AFQVKGEHRYTGIIHAFKTIYAKEGGFFGFYRGL 192
Query: 613 GVNCIKIAPESAIKFLAYEWYKKV 684
+ +AP + + F + K V
Sbjct: 193 MPTILGMAPYAGVSFFTFGTLKSV 216
Score = 38.1 bits (87), Expect = 0.031
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +1
Query: 442 LVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAANHGII---NTIKYMIKEGGL-SALWRG 609
L+ GG+A +++T + P D + MQ V + +T+KY G+ L+RG
Sbjct: 244 LLCGGVARAIAQTISYPFDVTRRRMQLGTVLPEFEKCLTMRDTMKYDYGHHGIRKGLYRG 303
Query: 610 NGVNCIKIAPESAIKFLAYEWYKK 681
+N I+ P A+ F YE K+
Sbjct: 304 LSLNYIRCIPSQAVAFTTYELMKQ 327
>sp|O13805|YE08_SCHPO Putative mitochondrial carrier C17H9.08
Length = 326
Score = 74.3 bits (181), Expect = 4e-13
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Frame = +1
Query: 406 PEEKSKGVAWKTLVAGGIAGCVSRTATAPLDRLKVTMQAH-----GVKAANHGIINTIKY 570
PE+ S K+ +AGG AGCV+++ APLDR+K+ Q + G + HG+ IK+
Sbjct: 9 PEKDSWEFLVKSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRHGLYKAIKH 68
Query: 571 MIKEGGLSALWRGNGVNCIKIAPESAIKFLAYEWYKKVIVEITKNKTGEVTLMEKFSXXX 750
+ GL L++G+ ++ P + IKF+AYE ++V++ +++T +F
Sbjct: 69 IYHVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETH----ARRFLSGS 124
Query: 751 XXXXXXXXXIYPMEVLKQECAFV 819
YP+E+++ A++
Sbjct: 125 LAGTCSVFFTYPLELIRVRLAYI 147
>sp|P04709|ADT1_MAIZE ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP
translocase 1) (Adenine nucleotide translocator 1) (ANT
1)
Length = 387
Score = 63.5 bits (153), Expect = 7e-10
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Frame = +1
Query: 346 WRKSFSIDLGENMTIPDD----FTPEEKSKGVAWKTLVAGGIAGCVSRTATAPLDRLKVT 513
W S S+ G N+ + P EK + GG++ VS+TA AP++R+K+
Sbjct: 55 WGPSMSVSGGINVPVMQTPLCANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLL 114
Query: 514 MQAHG--VKAAN-----HGIINTIKYMIKEGGLSALWRGNGVNCIKIAPESAIKFLAYEW 672
+Q +K+ GI++ K IK+ G S+LWRGN N I+ P A+ F A++
Sbjct: 115 IQNQDEMIKSGRLSEPYKGIVDCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNF-AFKD 173
Query: 673 YKKVIVEITKNKTG 714
Y K + K++ G
Sbjct: 174 YFKRLFNFKKDRDG 187
Score = 39.3 bits (90), Expect = 0.014
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Frame = +1
Query: 412 EKSKGVAWK----TLVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAAN-------HGIIN 558
+K + WK L +GG AG S LD + T A+ KAA +G+++
Sbjct: 182 KKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYAR-TRLANDAKAAKGGGERQFNGLVD 240
Query: 559 TIKYMIKEGGLSALWRGNGVNCIKIAPESAIKFLAYEWYKKVIV 690
+ +K G++ L+RG ++C+ I + F Y+ K V++
Sbjct: 241 VYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSIKPVVL 284
>sp|P12857|ADT2_MAIZE ADP,ATP carrier protein 2, mitochondrial precursor (ADP/ATP
translocase 2) (Adenine nucleotide translocator 2) (ANT
2)
Length = 387
Score = 62.0 bits (149), Expect = 2e-09
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Frame = +1
Query: 346 WRKSFSIDLGENMTI-PDDF---TPEEKSKGVAWKTLVAGGIAGCVSRTATAPLDRLKVT 513
W S S+ G N+ + P P EK + GG++ VS+TA AP++R+K+
Sbjct: 55 WGPSMSVSGGINVPVMPTPLFANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLL 114
Query: 514 MQAHG--VKAAN-----HGIINTIKYMIKEGGLSALWRGNGVNCIKIAPESAIKFLAYEW 672
+Q +K+ GI + K IK+ G S+LWRGN N I+ P A+ F A++
Sbjct: 115 IQNQDEMIKSGRLSEPYKGIADCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNF-AFKD 173
Query: 673 YKKVIVEITKNKTG 714
Y K + K++ G
Sbjct: 174 YFKRLFNFKKDRDG 187
Score = 39.3 bits (90), Expect = 0.014
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Frame = +1
Query: 412 EKSKGVAWK----TLVAGGIAGCVSRTATAPLDRLKVTMQAHGVKAAN-------HGIIN 558
+K + WK L +GG AG S LD + T A+ KAA +G+++
Sbjct: 182 KKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYAR-TRLANDAKAAKGGGDRQFNGLVD 240
Query: 559 TIKYMIKEGGLSALWRGNGVNCIKIAPESAIKFLAYEWYKKVIV 690
+ +K G++ L+RG ++C+ I + F Y+ K V++
Sbjct: 241 VYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSIKPVVL 284
>sp|Q27238|ADT_ANOGA ADP,ATP carrier protein (ADP/ATP translocase) (Adenine nucleotide
translocator) (ANT)
Length = 301
Score = 61.6 bits (148), Expect = 3e-09
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Frame = +1
Query: 436 KTLVAGGIAGCVSRTATAPLDRLKVTMQAHG------VKAANHGIINTIKYMIKEGGLSA 597
K +AGGI+ VS+TA AP++R+K+ +Q V GI++ + KE G+ A
Sbjct: 12 KDFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKEQGIGA 71
Query: 598 LWRGNGVNCIKIAPESAIKFLAYEWYKKVIV 690
WRGN N I+ P A+ F + YK+V +
Sbjct: 72 FWRGNLANVIRYFPTQALNFAFKDVYKQVFL 102
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.317 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,590,648
Number of Sequences: 369166
Number of extensions: 1749938
Number of successful extensions: 6371
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6206
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8341863645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)