Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02151
(835 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P24733|MYS_AEQIR Myosin heavy chain, striated muscle 405 e-113
sp|P79293|MYH7_PIG Myosin heavy chain, cardiac muscle beta ... 364 e-100
sp|P13539|MYH6_MESAU Myosin heavy chain, cardiac muscle alp... 363 e-100
sp|P02564|MYH7_RAT Myosin heavy chain, cardiac muscle beta ... 363 e-100
sp|P13533|MYH6_HUMAN Myosin heavy chain, cardiac muscle alp... 362 e-100
sp|Q02566|MYH6_MOUSE Myosin heavy chain, cardiac muscle alp... 362 e-100
sp|P12883|MYH7_HUMAN Myosin heavy chain, cardiac muscle bet... 361 1e-99
sp|P04461|MYH7_RABIT Myosin heavy chain, cardiac muscle bet... 361 1e-99
sp|P13540|MYH7_MESAU Myosin heavy chain, cardiac muscle bet... 359 5e-99
sp|P02563|MYH6_RAT Myosin heavy chain, cardiac muscle alpha... 359 6e-99
>sp|P24733|MYS_AEQIR Myosin heavy chain, striated muscle
Length = 1938
Score = 405 bits (1041), Expect = e-113
Identities = 197/281 (70%), Positives = 229/281 (81%), Gaps = 3/281 (1%)
Frame = +1
Query: 1 FGMDLQACIELIEKPMGILSILEEECMFPKASDMTFKAKLYDNHLGKSPNFGXXXXXXX- 177
FGMDLQ CI+LIEKPMGILSILEEECMFPKA D +F+ KLY NH+GK+ F
Sbjct: 512 FGMDLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRP 571
Query: 178 GQAEAHFELHHYAGSVPYNVTGWLEKNKDPLNETVINLLAASKEALVSSLFAPAEDASSS 357
Q AHFELHHYAG+VPY++TGWLEKNKDP+NE V+ LL ASKE LV+ LF E+ +
Sbjct: 572 NQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGG 631
Query: 358 GKRKKG--GAMQTISSTHRESLNKLMKNLQSTSPHFIRCIVPNEFKQPGVIDAHLVMHQL 531
GK+KKG A QTIS+ HRESLNKLMKNL ST PHF+RCI+PNE KQPG++DA LV+HQL
Sbjct: 632 GKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQL 691
Query: 532 HCNGVLEGIRICRKGFPNRMIYSEFKQRYSILAPNAIPQGFVEGKQVTGKILEAVQLDKN 711
CNGVLEGIRICRKGFP+R+IYSEFKQRYSILAPNAIPQGFV+GK V+ KIL +Q+D
Sbjct: 692 QCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPA 751
Query: 712 LYRLGNTKIFFKAGTLADLEDMRDEKLSSLISLFQAQIRGY 834
YRLG TK+FFKAG L +LE+MRDE+LS +IS+FQA IRGY
Sbjct: 752 EYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGY 792
>sp|P79293|MYH7_PIG Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)
Length = 1935
Score = 364 bits (934), Expect = e-100
Identities = 181/283 (63%), Positives = 220/283 (77%), Gaps = 6/283 (2%)
Frame = +1
Query: 1 FGMDLQACIELIEKPMGILSILEEECMFPKASDMTFKAKLYDNHLGKSPNFGXXXXXXXG 180
FGMDLQACI+LIEKPMGI+SILEEECMFPKA+DMTFKAKLYDNHLGKS NF G
Sbjct: 513 FGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLYDNHLGKSNNF-QKPRNIKG 571
Query: 181 QAEAHFELHHYAGSVPYNVTGWLEKNKDPLNETVINLLAASKEALVSSLFAPAEDASS-- 354
+ EAHF L HYAG+V YN+ GWL+KNKDPLNETV++L S L+S+LFA A +
Sbjct: 572 RPEAHFALIHYAGTVDYNIIGWLQKNKDPLNETVVDLYKKSSLKLLSNLFANYAGADTPV 631
Query: 355 ---SGKRKKGGAMQTISSTHRESLNKLMKNLQSTSPHFIRCIVPNEFKQPGVIDAHLVMH 525
GK KKG + QT+S+ HRE+LNKLM NL+ST PHF+RCI+PNE K PGVID LVMH
Sbjct: 632 EKGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVIDNPLVMH 691
Query: 526 QLHCNGVLEGIRICRKGFPNRMIYSEFKQRYSILAPNAIPQG-FVEGKQVTGKILEAVQL 702
QL CNGVLEGIRICRKGFPNR++Y +F+QRY IL P AIP+G F++ ++ K+L ++ +
Sbjct: 692 QLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLGSLDI 751
Query: 703 DKNLYRLGNTKIFFKAGTLADLEDMRDEKLSSLISLFQAQIRG 831
D N Y+ G+TK+FFKAG L LE+MRDE+LS +I+ QAQ RG
Sbjct: 752 DHNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRIQAQSRG 794
>sp|P13539|MYH6_MESAU Myosin heavy chain, cardiac muscle alpha isoform (MyHC-alpha)
Length = 1939
Score = 363 bits (931), Expect = e-100
Identities = 180/284 (63%), Positives = 222/284 (78%), Gaps = 7/284 (2%)
Frame = +1
Query: 1 FGMDLQACIELIEKPMGILSILEEECMFPKASDMTFKAKLYDNHLGKSPNFGXXXXXXXG 180
FGMDLQACI+LIEKPMGI+SILEEECMFPKA+DMTFKAKLYDNHLGKS NF G
Sbjct: 514 FGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLYDNHLGKSNNF-QKPRNVKG 572
Query: 181 QAEAHFELHHYAGSVPYNVTGWLEKNKDPLNETVINLLAASKEALVSSLFAP--AEDASS 354
+ EAHF L HYAG+V YN+ GWLEKNKDPLNETV+ L S L+++LF+ + DA
Sbjct: 573 KQEAHFSLVHYAGTVDYNILGWLEKNKDPLNETVVGLYQKSSLKLMATLFSTYASADAGD 632
Query: 355 SGK----RKKGGAMQTISSTHRESLNKLMKNLQSTSPHFIRCIVPNEFKQPGVIDAHLVM 522
SGK +KKG + QT+S+ HRE+LNKLM NL++T PHF+RCI+PNE K PGV+D LVM
Sbjct: 633 SGKGKGGKKKGSSFQTVSALHRENLNKLMTNLRTTHPHFVRCIIPNERKAPGVMDNPLVM 692
Query: 523 HQLHCNGVLEGIRICRKGFPNRMIYSEFKQRYSILAPNAIPQG-FVEGKQVTGKILEAVQ 699
HQL CNGVLEGIRICRKGFPNR++Y +F+QRY IL P AIP+G F++ ++ K+L ++
Sbjct: 693 HQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLD 752
Query: 700 LDKNLYRLGNTKIFFKAGTLADLEDMRDEKLSSLISLFQAQIRG 831
+D N Y+ G+TK+FFKAG L LE+MRDE+LS +I+ QAQ RG
Sbjct: 753 IDHNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRIQAQARG 796
>sp|P02564|MYH7_RAT Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)
Length = 1935
Score = 363 bits (931), Expect = e-100
Identities = 180/283 (63%), Positives = 219/283 (77%), Gaps = 6/283 (2%)
Frame = +1
Query: 1 FGMDLQACIELIEKPMGILSILEEECMFPKASDMTFKAKLYDNHLGKSPNFGXXXXXXXG 180
FGMDLQACI+LIEKPMGI+SILEEECMFPKA+DMTFKAKLYDNHLGKS NF G
Sbjct: 513 FGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLYDNHLGKSNNF-QKPRNIKG 571
Query: 181 QAEAHFELHHYAGSVPYNVTGWLEKNKDPLNETVINLLAASKEALVSSLFAPAEDASS-- 354
+ EAHF L HYAG+V YN+ GWL+KNKDPLNETV+ L S L+S+LFA A +
Sbjct: 572 KQEAHFSLIHYAGTVDYNILGWLQKNKDPLNETVVGLYQKSSLKLLSNLFANYAGADAPV 631
Query: 355 ---SGKRKKGGAMQTISSTHRESLNKLMKNLQSTSPHFIRCIVPNEFKQPGVIDAHLVMH 525
GK KKG + QT+S+ HRE+LNKLM NL+ST PHF+RCI+PNE K PGV+D LVMH
Sbjct: 632 DKGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMH 691
Query: 526 QLHCNGVLEGIRICRKGFPNRMIYSEFKQRYSILAPNAIPQG-FVEGKQVTGKILEAVQL 702
QL CNGVLEGIRICRKGFPNR++Y +F+QRY IL P AIP+G F++ ++ K+L ++ +
Sbjct: 692 QLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLGSLDI 751
Query: 703 DKNLYRLGNTKIFFKAGTLADLEDMRDEKLSSLISLFQAQIRG 831
D N Y+ G+TK+FFKAG L LE+MRDE+LS +I+ QAQ RG
Sbjct: 752 DHNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRIQAQSRG 794
>sp|P13533|MYH6_HUMAN Myosin heavy chain, cardiac muscle alpha isoform (MyHC-alpha)
Length = 1939
Score = 362 bits (929), Expect = e-100
Identities = 178/284 (62%), Positives = 220/284 (77%), Gaps = 7/284 (2%)
Frame = +1
Query: 1 FGMDLQACIELIEKPMGILSILEEECMFPKASDMTFKAKLYDNHLGKSPNFGXXXXXXXG 180
FGMDLQACI+LIEKPMGI+SILEEECMFPKA+DMTFKAKLYDNHLGKS NF G
Sbjct: 514 FGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLYDNHLGKSNNF-QKPRNIKG 572
Query: 181 QAEAHFELHHYAGSVPYNVTGWLEKNKDPLNETVINLLAASKEALVSSLFAP------AE 342
+ EAHF L HYAG+V YN+ GWLEKNKDPLNETV+ L S L+++LF+ +
Sbjct: 573 KQEAHFSLIHYAGTVDYNILGWLEKNKDPLNETVVALYQKSSLKLMATLFSSYATADTGD 632
Query: 343 DASSSGKRKKGGAMQTISSTHRESLNKLMKNLQSTSPHFIRCIVPNEFKQPGVIDAHLVM 522
S G +KKG + QT+S+ HRE+LNKLM NL++T PHF+RCI+PNE K PGV+D LVM
Sbjct: 633 SGKSKGGKKKGSSFQTVSALHRENLNKLMTNLRTTHPHFVRCIIPNERKAPGVMDNPLVM 692
Query: 523 HQLHCNGVLEGIRICRKGFPNRMIYSEFKQRYSILAPNAIPQG-FVEGKQVTGKILEAVQ 699
HQL CNGVLEGIRICRKGFPNR++Y +F+QRY IL P AIP+G F++ ++ T K+L ++
Sbjct: 693 HQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPVAIPEGQFIDSRKGTEKLLSSLD 752
Query: 700 LDKNLYRLGNTKIFFKAGTLADLEDMRDEKLSSLISLFQAQIRG 831
+D N Y+ G+TK+FFKAG L LE+MRDE+LS +I+ QAQ RG
Sbjct: 753 IDHNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRMQAQARG 796
>sp|Q02566|MYH6_MOUSE Myosin heavy chain, cardiac muscle alpha isoform (MyHC-alpha)
Length = 1938
Score = 362 bits (928), Expect = e-100
Identities = 180/284 (63%), Positives = 221/284 (77%), Gaps = 7/284 (2%)
Frame = +1
Query: 1 FGMDLQACIELIEKPMGILSILEEECMFPKASDMTFKAKLYDNHLGKSPNFGXXXXXXXG 180
FGMDLQACI+LIEKPMGI+SILEEECMFPKASDMTFKAKLYDNHLGKS NF G
Sbjct: 514 FGMDLQACIDLIEKPMGIMSILEEECMFPKASDMTFKAKLYDNHLGKSNNF-QKPRNVKG 572
Query: 181 QAEAHFELHHYAGSVPYNVTGWLEKNKDPLNETVINLLAASKEALVSSLFAP--AEDASS 354
+ EAHF L HYAG+V YN+ GWLEKNKDPLNETV+ L S L+++LF+ + D
Sbjct: 573 KQEAHFSLVHYAGTVDYNIMGWLEKNKDPLNETVVGLYQKSSLKLMATLFSTYASADTGD 632
Query: 355 SGK----RKKGGAMQTISSTHRESLNKLMKNLQSTSPHFIRCIVPNEFKQPGVIDAHLVM 522
SGK +KKG + QT+S+ HRE+LNKLM NL++T PHF+RCI+PNE K PGV+D LVM
Sbjct: 633 SGKGKGGKKKGSSFQTVSALHRENLNKLMTNLKTTHPHFVRCIIPNERKAPGVMDNPLVM 692
Query: 523 HQLHCNGVLEGIRICRKGFPNRMIYSEFKQRYSILAPNAIPQG-FVEGKQVTGKILEAVQ 699
HQL CNGVLEGIRICRKGFPNR++Y +F+QRY IL P AIP+G F++ ++ K+L ++
Sbjct: 693 HQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLGSLD 752
Query: 700 LDKNLYRLGNTKIFFKAGTLADLEDMRDEKLSSLISLFQAQIRG 831
+D N Y+ G+TK+FFKAG L LE+MRDE+LS +I+ QAQ RG
Sbjct: 753 IDHNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRIQAQARG 796
>sp|P12883|MYH7_HUMAN Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)
Length = 1935
Score = 361 bits (927), Expect = 1e-99
Identities = 179/283 (63%), Positives = 218/283 (77%), Gaps = 6/283 (2%)
Frame = +1
Query: 1 FGMDLQACIELIEKPMGILSILEEECMFPKASDMTFKAKLYDNHLGKSPNFGXXXXXXXG 180
FGMDLQACI+LIEKPMGI+SILEEECMFPKA+DMTFKAKL+DNHLGKS NF G
Sbjct: 513 FGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANF-QKPRNIKG 571
Query: 181 QAEAHFELHHYAGSVPYNVTGWLEKNKDPLNETVINLLAASKEALVSSLFAPAEDASS-- 354
+ EAHF L HYAG V YN+ GWL+KNKDPLNETV+ L S L+S+LFA A +
Sbjct: 572 KPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAGADAPI 631
Query: 355 ---SGKRKKGGAMQTISSTHRESLNKLMKNLQSTSPHFIRCIVPNEFKQPGVIDAHLVMH 525
GK KKG + QT+S+ HRE+LNKLM NL+ST PHF+RCI+PNE K PGV+D LVMH
Sbjct: 632 EKGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMH 691
Query: 526 QLHCNGVLEGIRICRKGFPNRMIYSEFKQRYSILAPNAIPQG-FVEGKQVTGKILEAVQL 702
QL CNGVLEGIRICRKGFPNR++Y +F+QRY IL P AIP+G F++ ++ K+L ++ +
Sbjct: 692 QLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDI 751
Query: 703 DKNLYRLGNTKIFFKAGTLADLEDMRDEKLSSLISLFQAQIRG 831
D N Y+ G+TK+FFKAG L LE+MRDE+LS +I+ QAQ RG
Sbjct: 752 DHNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRIQAQSRG 794
>sp|P04461|MYH7_RABIT Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta) (Beta
isomyosin)
Length = 736
Score = 361 bits (927), Expect = 1e-99
Identities = 180/282 (63%), Positives = 218/282 (77%), Gaps = 6/282 (2%)
Frame = +1
Query: 4 GMDLQACIELIEKPMGILSILEEECMFPKASDMTFKAKLYDNHLGKSPNFGXXXXXXXGQ 183
GMDLQACI+LIEKPMGI+SILEEECMFPKA+DMTFKAKLYDNHLGKS NF G+
Sbjct: 78 GMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLYDNHLGKSNNF-QKPRNIKGK 136
Query: 184 AEAHFELHHYAGSVPYNVTGWLEKNKDPLNETVINLLAASKEALVSSLFAPAEDASS--- 354
EAHF L HYAG+V YN+ GWL+KNKDPLNETV+ L S L+S+LFA A +
Sbjct: 137 PEAHFALIHYAGTVDYNILGWLQKNKDPLNETVVALYQKSSLKLLSNLFANYAGADAPVE 196
Query: 355 --SGKRKKGGAMQTISSTHRESLNKLMKNLQSTSPHFIRCIVPNEFKQPGVIDAHLVMHQ 528
GK KKG + QT+S+ HRE+LNKLM NL+ST PHF+RCI+PNE K PGVID LVMHQ
Sbjct: 197 KGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVIDNPLVMHQ 256
Query: 529 LHCNGVLEGIRICRKGFPNRMIYSEFKQRYSILAPNAIPQG-FVEGKQVTGKILEAVQLD 705
L CNGVLEGIRICRKGFPNR++Y +F+QRY IL P AIP+G F++ ++ K+L ++ +D
Sbjct: 257 LRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDID 316
Query: 706 KNLYRLGNTKIFFKAGTLADLEDMRDEKLSSLISLFQAQIRG 831
N Y+ G+TK+FFKAG L LE+MRDE+LS +I+ QAQ RG
Sbjct: 317 HNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRIQAQSRG 358
>sp|P13540|MYH7_MESAU Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)
Length = 1934
Score = 359 bits (922), Expect = 5e-99
Identities = 179/283 (63%), Positives = 217/283 (76%), Gaps = 6/283 (2%)
Frame = +1
Query: 1 FGMDLQACIELIEKPMGILSILEEECMFPKASDMTFKAKLYDNHLGKSPNFGXXXXXXXG 180
FGMDLQACI+LIEKPM I+SILEEECMFPKA+DMTFKAKLYDNHLGKS NF G
Sbjct: 512 FGMDLQACIDLIEKPMRIMSILEEECMFPKATDMTFKAKLYDNHLGKSNNF-QKPRNVKG 570
Query: 181 QAEAHFELHHYAGSVPYNVTGWLEKNKDPLNETVINLLAASKEALVSSLFAPAEDASS-- 354
+ EAHF L HYAG+V YN+ GWL+KNKDPLNETV+ L S L+S+LFA A +
Sbjct: 571 KQEAHFSLVHYAGTVDYNILGWLQKNKDPLNETVVGLYQKSSLKLLSNLFANYAGADAPV 630
Query: 355 ---SGKRKKGGAMQTISSTHRESLNKLMKNLQSTSPHFIRCIVPNEFKQPGVIDAHLVMH 525
GK KKG + QT+S HRE+LNKLM NL+ST PHF+RCI+PNE K PGV+D LVMH
Sbjct: 631 DKGKGKAKKGSSFQTVSVLHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMH 690
Query: 526 QLHCNGVLEGIRICRKGFPNRMIYSEFKQRYSILAPNAIPQG-FVEGKQVTGKILEAVQL 702
QL CNGVLEGIRICRKGFPNR++Y +F+QRY IL P AIP+G F++ ++ K+L ++ +
Sbjct: 691 QLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDI 750
Query: 703 DKNLYRLGNTKIFFKAGTLADLEDMRDEKLSSLISLFQAQIRG 831
D N Y+ G+TK+FFKAG L LE+MRDE+LS +I+ QAQ RG
Sbjct: 751 DHNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRIQAQSRG 793
>sp|P02563|MYH6_RAT Myosin heavy chain, cardiac muscle alpha isoform (MyHC-alpha)
Length = 1938
Score = 359 bits (921), Expect = 6e-99
Identities = 179/284 (63%), Positives = 220/284 (77%), Gaps = 7/284 (2%)
Frame = +1
Query: 1 FGMDLQACIELIEKPMGILSILEEECMFPKASDMTFKAKLYDNHLGKSPNFGXXXXXXXG 180
FGMDLQACI+LIEKPMGI+SILEEECMFPKA+DMTFKAKLYDNHLGKS NF G
Sbjct: 513 FGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLYDNHLGKSNNF-QKPRNVKG 571
Query: 181 QAEAHFELHHYAGSVPYNVTGWLEKNKDPLNETVINLLAASKEALVSSLFAP--AEDASS 354
+ EAHF L HYAG+V YN+ GWLEKNKDPLNETV+ L S L+++LF+ + D
Sbjct: 572 KQEAHFSLVHYAGTVDYNILGWLEKNKDPLNETVVGLYQKSSLKLMATLFSTYASADTGD 631
Query: 355 SGK----RKKGGAMQTISSTHRESLNKLMKNLQSTSPHFIRCIVPNEFKQPGVIDAHLVM 522
SGK +KKG + QT+S+ HRE+LNKLM NL++T PHF+RCI+PNE K PGV+D LVM
Sbjct: 632 SGKGKGGKKKGSSFQTVSALHRENLNKLMTNLRTTHPHFVRCIIPNERKAPGVMDNPLVM 691
Query: 523 HQLHCNGVLEGIRICRKGFPNRMIYSEFKQRYSILAPNAIPQG-FVEGKQVTGKILEAVQ 699
HQL CNGVLEGIRICRKGFPNR++Y +F+QRY IL P AIP+G F++ + K+L ++
Sbjct: 692 HQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSGKGAEKLLGSLD 751
Query: 700 LDKNLYRLGNTKIFFKAGTLADLEDMRDEKLSSLISLFQAQIRG 831
+D N Y+ G+TK+FFKAG L LE+MRDE+LS +I+ QAQ RG
Sbjct: 752 IDHNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITRIQAQARG 795
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,081,114
Number of Sequences: 369166
Number of extensions: 2232470
Number of successful extensions: 5474
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5180
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8100769320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)