Planaria EST Database

DrC_02128

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02128
         (766 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9W2B2|GR48C_DROME  Putative gustatory receptor 58c             30   7.2  

>sp|Q9W2B2|GR48C_DROME Putative gustatory receptor 58c
          Length = 412

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 19/77 (24%), Positives = 37/77 (48%)
 Frame = -1

Query: 604 ITRWKLVYNEMTRWLFSTPCIRRSMVNNKWDTFMTCDGSFFCW*ILVKKYIWITHLLTNY 425
           I +W++++N +T ++FS   + R  +      ++  D +F  W  ++   I++TH +   
Sbjct: 257 IFQWQVLFNLLTTYIFSIAVLFRLWI------YLEFDKNFHLWKGILYAIIFLTHHVE-- 308

Query: 424 LPYGITFMTHIFPIYRC 374
               I     IF I RC
Sbjct: 309 ----IVMQFSIFEINRC 321

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,724,774
Number of Sequences: 369166
Number of extensions: 1739164
Number of successful extensions: 3871
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3871
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7066925600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)