Planaria EST Database


DrC_02081

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02081
         (502 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27797|CRTC_HUMAN  Calreticulin precursor (CRP55) (Calreg...   102   7e-22
sp|P42918|CRTC2_BOVIN  Calreticulin, brain isoform 2 precurs...   100   2e-21
sp|P52193|CRTC1_BOVIN  Calreticulin, brain isoform 1 precurs...   100   2e-21
sp|P15253|CRTC_RABIT  Calreticulin precursor (CRP55) (Calreg...   100   3e-21
sp|P18418|CRTC_RAT  Calreticulin precursor (CRP55) (Calregul...   100   3e-21
sp|P14211|CRTC_MOUSE  Calreticulin precursor (CRP55) (Calreg...   100   3e-21
sp|Q8K3H7|CRTC_CRIGR  Calreticulin precursor (CRP55) (Calreg...   100   3e-21
sp|P11012|RAL1_ONCVO  RAL-1 protein precursor (RAL1 antigen)...    99   4e-21
sp|Q23858|CRTC_DICDI  Calreticulin precursor                       92   9e-19
sp|P29413|CRTC_DROME  Calreticulin precursor (CRP55) (Calreg...    91   2e-18
>sp|P27797|CRTC_HUMAN Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60) (grp60)
          Length = 417

 Score =  102 bits (253), Expect = 7e-22
 Identities = 44/73 (60%), Positives = 53/73 (72%)
 Frame = +1

Query: 4   WVHPEIDNPDYKPDNELYLRGEIGAAGFDLWQVKSGTIFDNVLITDDAQYAKDYGLKTWK 183
           W+HPEIDNP+Y PD  +Y     G  G DLWQVKSGTIFDN LIT+D  YA+++G +TW 
Sbjct: 289 WIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348

Query: 184 VTADGEKTMKNKQ 222
           VT   EK MK+KQ
Sbjct: 349 VTKAAEKQMKDKQ 361
>sp|P42918|CRTC2_BOVIN Calreticulin, brain isoform 2 precursor (CRP55) (Calregulin)
           (HACBP)
          Length = 421

 Score =  100 bits (249), Expect = 2e-21
 Identities = 43/73 (58%), Positives = 53/73 (72%)
 Frame = +1

Query: 4   WVHPEIDNPDYKPDNELYLRGEIGAAGFDLWQVKSGTIFDNVLITDDAQYAKDYGLKTWK 183
           W+HPEIDNP+Y PD+ +Y        G DLWQVKSGTIFDN LIT+D  YA+++G +TW 
Sbjct: 293 WIHPEIDNPEYSPDSNIYAYENFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 352

Query: 184 VTADGEKTMKNKQ 222
           VT   EK MK+KQ
Sbjct: 353 VTKAAEKQMKDKQ 365
>sp|P52193|CRTC1_BOVIN Calreticulin, brain isoform 1 precursor (CRP55) (Calregulin)
           (HACBP)
          Length = 417

 Score =  100 bits (249), Expect = 2e-21
 Identities = 43/73 (58%), Positives = 53/73 (72%)
 Frame = +1

Query: 4   WVHPEIDNPDYKPDNELYLRGEIGAAGFDLWQVKSGTIFDNVLITDDAQYAKDYGLKTWK 183
           W+HPEIDNP+Y PD+ +Y        G DLWQVKSGTIFDN LIT+D  YA+++G +TW 
Sbjct: 289 WIHPEIDNPEYSPDSNIYAYENFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348

Query: 184 VTADGEKTMKNKQ 222
           VT   EK MK+KQ
Sbjct: 349 VTKAAEKQMKDKQ 361
>sp|P15253|CRTC_RABIT Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
          Length = 418

 Score =  100 bits (248), Expect = 3e-21
 Identities = 43/73 (58%), Positives = 52/73 (71%)
 Frame = +1

Query: 4   WVHPEIDNPDYKPDNELYLRGEIGAAGFDLWQVKSGTIFDNVLITDDAQYAKDYGLKTWK 183
           W+HPEIDNP+Y PD  +Y        G DLWQVKSGTIFDN LIT+D  YA+++G +TW 
Sbjct: 289 WIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348

Query: 184 VTADGEKTMKNKQ 222
           VT   EK MK+KQ
Sbjct: 349 VTKTAEKQMKDKQ 361
>sp|P18418|CRTC_RAT Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60) (CALBP)
           (Calcium-binding protein 3) (CABP3)
          Length = 416

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 43/73 (58%), Positives = 52/73 (71%)
 Frame = +1

Query: 4   WVHPEIDNPDYKPDNELYLRGEIGAAGFDLWQVKSGTIFDNVLITDDAQYAKDYGLKTWK 183
           W+HPEIDNP+Y PD  +Y        G DLWQVKSGTIFDN LIT+D  YA+++G +TW 
Sbjct: 289 WIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348

Query: 184 VTADGEKTMKNKQ 222
           VT   EK MK+KQ
Sbjct: 349 VTKAAEKQMKDKQ 361
>sp|P14211|CRTC_MOUSE Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
          Length = 416

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 43/73 (58%), Positives = 52/73 (71%)
 Frame = +1

Query: 4   WVHPEIDNPDYKPDNELYLRGEIGAAGFDLWQVKSGTIFDNVLITDDAQYAKDYGLKTWK 183
           W+HPEIDNP+Y PD  +Y        G DLWQVKSGTIFDN LIT+D  YA+++G +TW 
Sbjct: 289 WIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348

Query: 184 VTADGEKTMKNKQ 222
           VT   EK MK+KQ
Sbjct: 349 VTKAAEKQMKDKQ 361
>sp|Q8K3H7|CRTC_CRIGR Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
          Length = 417

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 43/73 (58%), Positives = 52/73 (71%)
 Frame = +1

Query: 4   WVHPEIDNPDYKPDNELYLRGEIGAAGFDLWQVKSGTIFDNVLITDDAQYAKDYGLKTWK 183
           W+HPEIDNP+Y PD  +Y        G DLWQVKSGTIFDN LIT+D  YA+++G +TW 
Sbjct: 289 WIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348

Query: 184 VTADGEKTMKNKQ 222
           VT   EK MK+KQ
Sbjct: 349 VTKASEKQMKDKQ 361
>sp|P11012|RAL1_ONCVO RAL-1 protein precursor (RAL1 antigen) (41 kDa larval antigen)
          Length = 388

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 43/72 (59%), Positives = 55/72 (76%)
 Frame = +1

Query: 4   WVHPEIDNPDYKPDNELYLRGEIGAAGFDLWQVKSGTIFDNVLITDDAQYAKDYGLKTWK 183
           W+HPEI+ PDY PD+ LY+  +IGA GFDLWQVKSGTIFD+V++TD  + AK +G KT K
Sbjct: 287 WIHPEIEIPDYTPDDNLYVYDDIGAIGFDLWQVKSGTIFDDVIVTDSVEEAKKFGEKTLK 346

Query: 184 VTADGEKTMKNK 219
           +T +GEK    K
Sbjct: 347 ITREGEKKKGKK 358
>sp|Q23858|CRTC_DICDI Calreticulin precursor
          Length = 424

 Score = 91.7 bits (226), Expect = 9e-19
 Identities = 39/69 (56%), Positives = 52/69 (75%)
 Frame = +1

Query: 4   WVHPEIDNPDYKPDNELYLRGEIGAAGFDLWQVKSGTIFDNVLITDDAQYAKDYGLKTWK 183
           WVHP IDNP+Y  DNELYL  ++GA GF+LWQVKSG+IF+N+++TD  + AKD+  KT+ 
Sbjct: 290 WVHPLIDNPEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVTDSVEEAKDFSEKTFV 349

Query: 184 VTADGEKTM 210
              + EK M
Sbjct: 350 ANQEAEKKM 358
>sp|P29413|CRTC_DROME Calreticulin precursor (CRP55) (Calregulin) (HACBP)
          Length = 406

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 46/73 (63%), Positives = 51/73 (69%)
 Frame = +1

Query: 4   WVHPEIDNPDYKPDNELYLRGEIGAAGFDLWQVKSGTIFDNVLITDDAQYAKDYGLKTWK 183
           W HPEI NP+Y PD++LYLR EI   GFDLWQVKSGTIFDNVLITDD + A     +  K
Sbjct: 289 WEHPEIANPEYVPDDKLYLRKEICTLGFDLWQVKSGTIFDNVLITDDVELAAKAAAEV-K 347

Query: 184 VTADGEKTMKNKQ 222
            T  GEK MK  Q
Sbjct: 348 NTQAGEKKMKEAQ 360
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,767,396
Number of Sequences: 369166
Number of extensions: 551123
Number of successful extensions: 1650
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1644
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 3168768640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)