Planaria EST Database


DrC_02079

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02079
         (825 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8VCM3|ZFY21_MOUSE  Zinc finger FYVE domain-containing pr...    35   0.19 
sp|Q9BQ24|ZFY21_HUMAN  Zinc finger FYVE domain-containing pr...    32   2.1  
sp|P07873|VMAT_PI3H4  Matrix protein                               32   2.1  
sp|Q6P8K8|CBPA4_MOUSE  Carboxypeptidase A4 precursor               31   3.6  
sp|Q9UI42|CBPA4_HUMAN  Carboxypeptidase A4 precursor (Carbox...    31   3.6  
sp|Q8L799|MIOX1_ARATH  Inositol oxygenase 1 (Myo-inositol ox...    31   3.6  
sp|Q9ESC1|ELTD1_RAT  EGF, latrophilin and seven transmembran...    31   3.6  
sp|Q923X1|ELTD1_MOUSE  EGF, latrophilin seven transmembrane ...    31   3.6  
sp|P06166|VMAT_PI3B  Matrix protein                                30   6.2  
sp|P18015|COP_CLOPE  Copy number protein (ORF4)                    30   8.1  
>sp|Q8VCM3|ZFY21_MOUSE Zinc finger FYVE domain-containing protein 21
          Length = 234

 Score = 35.4 bits (80), Expect = 0.19
 Identities = 16/33 (48%), Positives = 16/33 (48%)
 Frame = +2

Query: 455 PQWRSDSFFPRCCHCDRNFQFYFVADIICRRCG 553
           PQW  D   PRC  CD  F F       CRRCG
Sbjct: 39  PQWVPDKECPRCMQCDAKFDF-ITRKHHCRRCG 70
>sp|Q9BQ24|ZFY21_HUMAN Zinc finger FYVE domain-containing protein 21
          Length = 234

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 15/33 (45%), Positives = 15/33 (45%)
 Frame = +2

Query: 455 PQWRSDSFFPRCCHCDRNFQFYFVADIICRRCG 553
           PQW  D    RC  CD  F F       CRRCG
Sbjct: 39  PQWVPDKECRRCMQCDAKFDF-LTRKHHCRRCG 70
>sp|P07873|VMAT_PI3H4 Matrix protein
          Length = 353

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = -3

Query: 322 LVGKFVIKRKFCYPLI-LVSAINFWIICLFIGEIPTSAIF--SYPPQFYFYPKII 167
           L  + V KR+ CYPL+ L   +N  I    +      AIF  S P +F +YP II
Sbjct: 288 LASQLVFKREICYPLMDLNPHLNLVIWASSVEITRVDAIFQPSLPGEFRYYPNII 342
>sp|Q6P8K8|CBPA4_MOUSE Carboxypeptidase A4 precursor
          Length = 420

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +3

Query: 435 QVFNLVVRNGDQIRFFPDVVTAIEI-FNFISSPTSFVEDADIL 560
           QVF + VRNGD+IR   ++V +  +  +   SP++F    DIL
Sbjct: 25  QVFRINVRNGDEIRKLTELVNSDHLKLSVWKSPSTFDRPVDIL 67
>sp|Q9UI42|CBPA4_HUMAN Carboxypeptidase A4 precursor (Carboxypeptidase A3)
          Length = 421

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 435 QVFNLVVRNGDQIRFFPDVVTAIEI-FNFISSPTSFVEDADIL 560
           QV  + VRNGD+I     +V +  +  NF  SP+SF    D+L
Sbjct: 25  QVLRINVRNGDEISKLSQLVNSNNLKLNFWKSPSSFNRPVDVL 67
>sp|Q8L799|MIOX1_ARATH Inositol oxygenase 1 (Myo-inositol oxygenase 1) (AtMIOX1)
          Length = 311

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = -2

Query: 623 EMNSKALVKAKFRSPNTKLQKQNIRIFYK*CRRRNKIENFYRSDNIGEKTNLISIADDQI 444
           E  ++ ++ A F +P+T    +  R +     RR  +E FYR ++IG+  + +    ++ 
Sbjct: 28  EEETELVLDAGFEAPHTNSFGRTFRDYDAESERRRGVEEFYRVNHIGQTVDFVRKMREEY 87

Query: 443 EYL 435
           E L
Sbjct: 88  EKL 90
>sp|Q9ESC1|ELTD1_RAT EGF, latrophilin and seven transmembrane domain containing protein
           1 precursor (EGF-TM7-latrophilin-related protein) (ETL
           protein)
          Length = 738

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = -3

Query: 490 TSGKKRI*SPLRTTKLNT---CIYDLRRVLFNVLEVKLFKALHTTCAFW 353
           + GK+++ S + +  +++    +Y+L ++ F +  VKL     T CAFW
Sbjct: 372 SKGKEKVISSVISASISSNPPTLYELEKITFTLSHVKLSDKHQTQCAFW 420
>sp|Q923X1|ELTD1_MOUSE EGF, latrophilin seven transmembrane domain containing protein 1
           precursor
          Length = 739

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = -3

Query: 490 TSGKKRI*SPLRTTKLNT---CIYDLRRVLFNVLEVKLFKALHTTCAFW 353
           + GK+++ S + +  +++    +Y+L ++ F +  VKL     T CAFW
Sbjct: 373 SEGKEKVISSVISASISSNPPTLYELEKITFTLSHVKLSDKHRTQCAFW 421
>sp|P06166|VMAT_PI3B Matrix protein
          Length = 351

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -3

Query: 322 LVGKFVIKRKFCYPLI-LVSAINFWIICLFIGEIPTSAIF--SYPPQFYFYPKII 167
           L  +   KR+ CYPL+ L   +N  I    +      AIF  S P +F +YP II
Sbjct: 288 LASQLAFKREICYPLMDLNPHLNLVIWASSVEITRVDAIFQPSLPGEFRYYPNII 342
>sp|P18015|COP_CLOPE Copy number protein (ORF4)
          Length = 198

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = +1

Query: 682 KDLIFLFLDVELLITKYINLFVGFYL*YCCNINGNIFITICIYNLSLI 825
           KDLIF  L + L +   +NL V F       +N +IF+ + + NLS I
Sbjct: 8   KDLIFSILTI-LFVILCLNLIVFFSYNKAVEVNQSIFLMMLLLNLSFI 54
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,550,208
Number of Sequences: 369166
Number of extensions: 2079064
Number of successful extensions: 4919
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4916
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7956112725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)