Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02030
(714 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8BUY9|PGT1_MOUSE Geranylgeranyl transferase type I beta... 142 7e-34
sp|P53610|PGT1_RAT Geranylgeranyl transferase type I beta s... 142 7e-34
sp|P53609|PGT1_HUMAN Geranylgeranyl transferase type I beta... 141 2e-33
sp|P53611|PGTB_HUMAN Geranylgeranyl transferase type II bet... 125 1e-28
sp|Q08603|PGTB_RAT Geranylgeranyl transferase type II beta ... 123 6e-28
sp|P41992|PFTB_CAEEL Probable protein farnesyltransferase b... 119 8e-27
sp|P53612|PGTB_MOUSE Geranylgeranyl transferase type II bet... 112 1e-24
sp|O93830|BET2_CANAL Type II proteins geranylgeranyltransfe... 110 3e-24
sp|P46960|PTB1_SCHPO Type II proteins geranylgeranyltransfe... 108 1e-23
sp|P20133|BET2_YEAST Type II proteins geranylgeranyltransfe... 104 2e-22
>sp|Q8BUY9|PGT1_MOUSE Geranylgeranyl transferase type I beta subunit (Type I protein
geranyl-geranyltransferase beta subunit) (GGTase-I-beta)
Length = 377
Score = 142 bits (359), Expect = 7e-34
Identities = 73/182 (40%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Frame = +3
Query: 3 EADVRFIFSALASCAIINDFSAVDIESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIA 182
E D+RF++ A C ++N++S +D++ +S+I + +YD G Q ESHGGST+C IA
Sbjct: 169 ENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIA 228
Query: 183 SLKILSKLDVLFPENSNKKNLMLRWLMNRQYEGFHGRPHKDDDSCYTFWVGASLKMLGYG 362
SL ++ KL+ +F E + N + RW + RQ G+HGRP+K D+CY+FWVGA+LK+L
Sbjct: 229 SLCLMGKLEEVFSEK--ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIF 286
Query: 363 HLIDFPSLFNFIESTYDGLVGGFCKLKNAGHSFADPMHTYLCLAGISSLIND--CKANST 536
+F N+I ST D LVGGF K + S D +H Y + G+S + CK +
Sbjct: 287 QYTNFEKNRNYILSTQDRLVGGFAKWPD---SHPDALHAYFGICGLSLMEESGICKVHPA 343
Query: 537 MD 542
++
Sbjct: 344 LN 345
>sp|P53610|PGT1_RAT Geranylgeranyl transferase type I beta subunit (Type I protein
geranyl-geranyltransferase beta subunit) (GGTase-I-beta)
Length = 377
Score = 142 bits (359), Expect = 7e-34
Identities = 73/182 (40%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Frame = +3
Query: 3 EADVRFIFSALASCAIINDFSAVDIESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIA 182
E D+RF++ A C ++N++S +D++ +S+I + +YD G Q ESHGGST+C IA
Sbjct: 169 ENDMRFVYCASCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIA 228
Query: 183 SLKILSKLDVLFPENSNKKNLMLRWLMNRQYEGFHGRPHKDDDSCYTFWVGASLKMLGYG 362
SL ++ KL+ +F E + N + RW + RQ G+HGRP+K D+CY+FWVGA+LK+L
Sbjct: 229 SLCLMGKLEEVFSEK--ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIF 286
Query: 363 HLIDFPSLFNFIESTYDGLVGGFCKLKNAGHSFADPMHTYLCLAGISSLIND--CKANST 536
+F N+I ST D LVGGF K + S D +H Y + G+S + CK +
Sbjct: 287 QYTNFEKNRNYILSTQDRLVGGFAKWPD---SHPDALHAYFGICGLSLMEESGICKVHPA 343
Query: 537 MD 542
++
Sbjct: 344 LN 345
>sp|P53609|PGT1_HUMAN Geranylgeranyl transferase type I beta subunit (Type I protein
geranyl-geranyltransferase beta subunit) (GGTase-I-beta)
Length = 377
Score = 141 bits (356), Expect = 2e-33
Identities = 72/182 (39%), Positives = 111/182 (60%), Gaps = 2/182 (1%)
Frame = +3
Query: 3 EADVRFIFSALASCAIINDFSAVDIESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIA 182
E D+RF++ A C ++N++S +D++ +++I + +YD G Q ESHGGST+C IA
Sbjct: 169 ENDMRFVYCASCICYMLNNWSGMDMKKAITYIRRSMSYDNGLAQGAGLESHGGSTFCGIA 228
Query: 183 SLKILSKLDVLFPENSNKKNLMLRWLMNRQYEGFHGRPHKDDDSCYTFWVGASLKMLGYG 362
SL ++ KL+ +F E + N + RW + RQ G+HGRP+K D+CY+FWVGA+LK+L
Sbjct: 229 SLCLMGKLEEVFSEK--ELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIF 286
Query: 363 HLIDFPSLFNFIESTYDGLVGGFCKLKNAGHSFADPMHTYLCLAGISSLIND--CKANST 536
+F N+I ST D LVGGF K + S D +H Y + G+S + CK +
Sbjct: 287 QYTNFEKNRNYILSTQDRLVGGFAKWPD---SHPDALHAYFGICGLSLMEESGICKVHPA 343
Query: 537 MD 542
++
Sbjct: 344 LN 345
>sp|P53611|PGTB_HUMAN Geranylgeranyl transferase type II beta subunit (Rab
geranylgeranyltransferase beta subunit) (Rab
geranyl-geranyltransferase beta subunit) (Rab GG
transferase beta) (Rab GGTase beta)
Length = 331
Score = 125 bits (313), Expect = 1e-28
Identities = 70/171 (40%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Frame = +3
Query: 3 EADVRFIFSALASCAIINDFSAVDIESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIA 182
E D RF F A+A+ A++ A+++E + F+L C N+DGGFG RP ESH G YC
Sbjct: 140 EIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTG 199
Query: 183 SLKILSKLDVLFPENSNKKNLMLRWLMNRQYE--GFHGRPHKDDDSCYTFWVGASLKMLG 356
L I S+L + +L+ WL RQ G +GRP K D CY++WV ASLK++G
Sbjct: 200 FLAITSQL------HQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIG 253
Query: 357 YGHLIDFPSLFNFIESTYDGLVGGFCKLKNAGHSFADPMHTYLCLAGISSL 509
H ID L NFI + D GGF + DP HT +AG+S L
Sbjct: 254 RLHWIDREKLRNFILACQDEETGGFA---DRPGDMVDPFHTLFGIAGLSLL 301
Score = 33.1 bits (74), Expect = 0.76
Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 4/150 (2%)
Frame = +3
Query: 21 IFSALASCAIINDFSAVDIESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIASLKILS 200
I+ L ++ ++ E +++FI CQ+ GG + H T A+ L +
Sbjct: 50 IYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYD 109
Query: 201 KLDVLFPENSNKKNLMLRWLMNRQYE--GFHGRPHKDDDSCYTFWVGASLKMLGYGHLID 374
++V+ N ++ ++ Q E F G + D+ ++F A+L +LG I+
Sbjct: 110 SINVI------DVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAIN 163
Query: 375 FPSLFNFIES--TYDGLVGGFCKLKNAGHS 458
F+ S +DG G C+ + H+
Sbjct: 164 VEKAIEFVLSCMNFDGGFG--CRPGSESHA 191
>sp|Q08603|PGTB_RAT Geranylgeranyl transferase type II beta subunit (Rab
geranylgeranyltransferase beta subunit) (Rab
geranyl-geranyltransferase beta subunit) (Rab GG
transferase beta) (Rab GGTase beta)
Length = 331
Score = 123 bits (308), Expect = 6e-28
Identities = 69/171 (40%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Frame = +3
Query: 3 EADVRFIFSALASCAIINDFSAVDIESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIA 182
E D RF F A+A+ A++ A+++E + F+L C N+DGGFG RP ESH G YC
Sbjct: 140 EIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTG 199
Query: 183 SLKILSKLDVLFPENSNKKNLMLRWLMNRQYE--GFHGRPHKDDDSCYTFWVGASLKMLG 356
L I S+L + +L+ WL RQ G +GRP K D CY++WV ASLK++G
Sbjct: 200 FLAITSQL------HQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIG 253
Query: 357 YGHLIDFPSLFNFIESTYDGLVGGFCKLKNAGHSFADPMHTYLCLAGISSL 509
H ID L +FI + D GGF + DP HT +AG+S L
Sbjct: 254 RLHWIDREKLRSFILACQDEETGGFA---DRPGDMVDPFHTLFGIAGLSLL 301
>sp|P41992|PFTB_CAEEL Probable protein farnesyltransferase beta subunit (CAAX
farnesyltransferase beta subunit) (RAS proteins
prenyltransferase beta) (FTase-beta)
Length = 335
Score = 119 bits (298), Expect = 8e-27
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Frame = +3
Query: 3 EADVRFIFSALASCAIINDFSAVDIESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIA 182
E D RF +LA+C ++ S ++I+S V F+++C N DGGFG RP ESH G YC +
Sbjct: 146 EVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGSESHSGQIYCCVG 205
Query: 183 SLKILSKLDVLFPENSNKKNLMLRWLMNRQYE--GFHGRPHKDDDSCYTFWVGASLKMLG 356
+L I +LD + ++ WL RQ + G +GRP K D CY++WV ASL +LG
Sbjct: 206 ALAIAGRLDEI------DRDRTAEWLAFRQCDSGGLNGRPEKLPDVCYSWWVLASLAILG 259
Query: 357 YGHLIDFPSLFNFIESTYDGLVGGFCKLKNAGHSFADPMHTYLCLAGISSLIND 518
+ ID ++ FI + D GGF + ADP HT +A +S +D
Sbjct: 260 RLNFIDSDAMKKFIYACQDDETGGFA---DRPGDCADPFHTVFGIAALSLFGDD 310
Score = 44.3 bits (103), Expect = 3e-04
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = +3
Query: 78 ESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIASLKILSKLDVLFPENSNKKNLMLRW 257
E +V+++L C+N DGG+G P +SH T CA+ +L I + ++ + + +
Sbjct: 75 EEIVNYVLGCRNTDGGYGPAPGHDSHLLHTLCAVQTLIIFNSIE------KADADTISEY 128
Query: 258 LMNRQYE--GFHGRPHKDDDSCYTFWVGASLKMLGYGHLIDFPSLFNFIESTYDGLVGGF 431
+ Q E F G + D+ +T A+ +LG ++ S F+ Y+ GGF
Sbjct: 129 VKGLQQEDGSFCGDLSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYN-TDGGF 187
>sp|P53612|PGTB_MOUSE Geranylgeranyl transferase type II beta subunit (Rab
geranylgeranyltransferase beta subunit) (Rab
geranyl-geranyltransferase beta subunit) (Rab GG
transferase beta) (Rab GGTase beta)
Length = 339
Score = 112 bits (279), Expect = 1e-24
Identities = 65/171 (38%), Positives = 89/171 (52%), Gaps = 2/171 (1%)
Frame = +3
Query: 3 EADVRFIFSALASCAIINDFSAVDIESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIA 182
E D RF F A+A+ A++ A+++E + F+L C N+DGGFG RP ESH G YC
Sbjct: 148 EIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTG 207
Query: 183 SLKILSKLDVLFPENSNKKNLMLRWLMNRQYE--GFHGRPHKDDDSCYTFWVGASLKMLG 356
L I S+L + +L+ WL Q +GR K D CY++WV ASLK++G
Sbjct: 208 FLAITSQL------HQVNSDLLGWWLCEAQLPSGALNGRREKLPDVCYSWWVLASLKIIG 261
Query: 357 YGHLIDFPSLFNFIESTYDGLVGGFCKLKNAGHSFADPMHTYLCLAGISSL 509
H I L +FI + D GGF + DP HT +AG+S L
Sbjct: 262 RLHWIVSEKLRSFILACQDEETGGFA---DRPGDMVDPFHTLFGIAGLSLL 309
Score = 30.0 bits (66), Expect = 6.4
Identities = 32/150 (21%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Frame = +3
Query: 21 IFSALASCAIINDFSAVDIESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIASLKILS 200
++ L ++ ++ E ++ FI CQ+ GG + H +++++IL+
Sbjct: 58 VYWGLTVMDLMGQLHRMNREEILVFIKSCQHECGGISASIGHDPH---LLYTLSAVQILT 114
Query: 201 KLDVLFPENSNKKNLMLRWLMNRQYE--GFHGRPHKDDDSCYTFWVGASLKMLGYGHLID 374
D + N +K ++ ++ + Q E F G + D+ ++F A+L +LG I+
Sbjct: 115 LYDSVHVINVDK---VVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAIN 171
Query: 375 FPSLFNFIES--TYDGLVGGFCKLKNAGHS 458
F+ S +DG G C+ + H+
Sbjct: 172 VEKAIEFVLSCMNFDGGFG--CRPGSESHA 199
>sp|O93830|BET2_CANAL Type II proteins geranylgeranyltransferase beta subunit (Type II
protein geranyl-geranyltransferase beta subunit)
(GGTase-II-beta) (PGGT) (YPT1/SEC4 proteins
geranylgeranyltransferase beta subunit)
Length = 341
Score = 110 bits (276), Expect = 3e-24
Identities = 63/170 (37%), Positives = 98/170 (57%), Gaps = 3/170 (1%)
Frame = +3
Query: 3 EADVRFIFSALASCAIINDFSAVDIESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIA 182
E D RF+++A++S +++N + ++ +FI++C N+DGGFG P ESH + +
Sbjct: 146 EVDTRFVYTAVSSLSLLNALTDSIADTASAFIMQCFNFDGGFGLIPGSESHAAQVFTCVG 205
Query: 183 SLKILSKLDVLFPENSNKKNLMLRWLMNRQY---EGFHGRPHKDDDSCYTFWVGASLKML 353
+L I++KLD+L E NKK ++ WL RQ GF+GRP K D CY++WV +SL +L
Sbjct: 206 ALAIMNKLDLLDVE--NKKVKLIDWLTERQVLPSGGFNGRPEKLPDVCYSWWVLSSLSIL 263
Query: 354 GYGHLIDFPSLFNFIESTYDGLVGGFCKLKNAGHSFADPMHTYLCLAGIS 503
+ +D L NFI + D GGF + + D HT +AG+S
Sbjct: 264 KRKNWVDLKILENFILTCQDLENGGF---SDRPGNQTDVYHTCFAIAGLS 310
Score = 41.2 bits (95), Expect = 0.003
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Frame = +3
Query: 21 IFSALASCAIINDFSAVDIESVVSFILKC-QNYDGGFGQRpreESHGGSTYCAIASLKIL 197
++ + + +N+ SA+ + V+ +I+ C + G FG P+ + H ST A+ LKI
Sbjct: 44 LYWGVTALITMNELSALAQQDVIDYIMLCWDDKTGAFGSFPKHDGHILSTLSALQVLKIY 103
Query: 198 -SKLDVL----FPENSNKKNLMLRWLMNRQYE--GFHGRPHKDDDSCYTFWVGASLKML 353
+L VL N NK+ +++++ Q F G + + D+ + + +SL +L
Sbjct: 104 DQELTVLNDNNESSNGNKRERLIKFITGLQLPDGSFQGDKYGEVDTRFVYTAVSSLSLL 162
Score = 37.7 bits (86), Expect = 0.031
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 9 DVRFIFSALASCAIINDFSAVDIESVVSFILKCQNYD-GGFGQRpreESHGGSTYCAIAS 185
DV + + L+S +I+ + VD++ + +FIL CQ+ + GGF RP ++ T AIA
Sbjct: 249 DVCYSWWVLSSLSILKRKNWVDLKILENFILTCQDLENGGFSDRPGNQTDVYHTCFAIAG 308
Query: 186 LKIL 197
L ++
Sbjct: 309 LSLI 312
>sp|P46960|PTB1_SCHPO Type II proteins geranylgeranyltransferase beta subunit (Type II
protein geranyl-geranyltransferase beta subunit)
(GGTase-II-beta)
Length = 311
Score = 108 bits (270), Expect = 1e-23
Identities = 64/171 (37%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Frame = +3
Query: 3 EADVRFIFSALASCAIINDFSAVDIESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIA 182
E D RF++S + AI+ ++ + V +++KC N+DGGFG P ESHG + +A
Sbjct: 126 EIDARFLYSGINCLAILGKLDYLNKNTAVDWLMKCYNFDGGFGLCPGAESHGAMVFTCVA 185
Query: 183 SLKILSKLDVLFPENSNKKNLMLRWLMNRQYE--GFHGRPHKDDDSCYTFWVGASLKMLG 356
+LKIL+KLD++ E L+ W+ RQ + G +GRP K DSCY +W + L ++G
Sbjct: 186 ALKILNKLDLIDEE------LLGWWISERQVKGGGLNGRPEKLPDSCYGWWDLSPLAIIG 239
Query: 357 YGHLIDFPSLFNFIESTYDGLVGGFCKLKNAGHSFADPMHTYLCLAGISSL 509
ID L +F+ T D GGF K D HT LAG+S L
Sbjct: 240 KLDWIDRNQLIDFLLGTQDADSGGFADRK---EDATDVYHTCFSLAGLSLL 287
Score = 37.4 bits (85), Expect = 0.040
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +3
Query: 12 VRFIFSALASCAIINDFSAVDIESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIASLK 191
V I+ + S ++ +D E +VSF+L C GGF P + H +T A+ L
Sbjct: 33 VSAIYWSCMSFWLLKKKDQIDKERIVSFLLSCLTESGGFACYPGHDDHITNTVYAVQVLA 92
Query: 192 ILSKLDVL 215
+L L V+
Sbjct: 93 MLDSLHVV 100
>sp|P20133|BET2_YEAST Type II proteins geranylgeranyltransferase beta subunit (Type II
protein geranyl-geranyltransferase beta subunit)
(GGTase-II-beta) (PGGT) (YPT1/SEC4 proteins
geranylgeranyltransferase beta subunit)
Length = 325
Score = 104 bits (260), Expect = 2e-22
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Frame = +3
Query: 3 EADVRFIFSALASCAIINDFSAVDIESVVSFILKCQNYDGGFGQRpreESHGGSTYCAIA 182
E D RF+++AL++ +I+ + ++ ++ V F+LKC N+DGGFG P ESH + +
Sbjct: 133 EVDTRFVYTALSALSILGELTSEVVDPAVDFVLKCYNFDGGFGLCPNAESHAAQAFTCLG 192
Query: 183 SLKILSKLDVLFPENSNKKNLMLRWLMNRQYE--GFHGRPHKDDDSCYTFWVGASLKMLG 356
+L I +KLD+L + + WL RQ G +GRP K D CY++WV +SL ++G
Sbjct: 193 ALAIANKLDMLSDDQLEEIGW---WLCERQLPEGGLNGRPSKLPDVCYSWWVLSSLAIIG 249
Query: 357 YGHLIDFPSLFNFIESTYDGLVGGFCKLKNAGHSFADPMHTYLCLAGIS 503
I++ L FI D GG + + + D HT +AG+S
Sbjct: 250 RLDWINYEKLTEFILKCQDEKKGG---ISDRPENEVDVFHTVFGVAGLS 295
Score = 39.7 bits (91), Expect = 0.008
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Frame = +3
Query: 21 IFSALASCAIINDFSAVDIESVVSFILKC-QNYDGGFGQRpreESHGGSTYCAIASLKIL 197
I+ L + +++ E V+SF+L C + G F PR ++H +T A+ L
Sbjct: 39 IYWGLTALCVLDSPETFVKEEVISFVLSCWDDKYGAFAPFPRHDAHLLTTLSAVQILATY 98
Query: 198 SKLDVLFPENSNKKNLMLRWLMNRQYE--GFHGRPHKDDDSCYTFWVGASLKMLG--YGH 365
LDVL ++K ++ ++ Q E F G + D+ + + ++L +LG
Sbjct: 99 DALDVL---GKDRKVRLISFIRGNQLEDGSFQGDRFGEVDTRFVYTALSALSILGELTSE 155
Query: 366 LIDFPSLFNFIESTYDGLVGGFCKLKNAGHSFADPMHTYLCLAGIS 503
++D P++ +F+ Y+ GGF NA A + CL ++
Sbjct: 156 VVD-PAV-DFVLKCYN-FDGGFGLCPNAESHAA---QAFTCLGALA 195
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,551,766
Number of Sequences: 369166
Number of extensions: 1558646
Number of successful extensions: 3559
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3510
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6316483550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)