Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02021
(428 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P22861|AMYG_DEBOC Glucoamylase 1 precursor (Glucan 1,4-a... 29 4.7
sp|P13829|OS25_PLAFO 25 kDa ookinete surface antigen precur... 28 8.1
>sp|P22861|AMYG_DEBOC Glucoamylase 1 precursor (Glucan 1,4-alpha-glucosidase)
(1,4-alpha-D-glucan glucohydrolase)
Length = 958
Score = 28.9 bits (63), Expect = 4.7
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +1
Query: 121 DMNEESAFEDECNTSCSNGKCINNKCYPIVT 213
DMNE S+F C SC GK N YP T
Sbjct: 470 DMNEVSSF---CVGSCGTGKYFENPAYPPFT 497
>sp|P13829|OS25_PLAFO 25 kDa ookinete surface antigen precursor (Pfs25)
Length = 217
Score = 28.1 bits (61), Expect = 8.1
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 121 DMNEESAFEDEC-NTSCSNGKCINNKCYPIVT 213
DM +EC N +C NGKCI + P+ T
Sbjct: 99 DMVNNVCIPNECKNVTCGNGKCILDTSNPVKT 130
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,059,424
Number of Sequences: 369166
Number of extensions: 515608
Number of successful extensions: 1435
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2095022160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)