Planaria EST Database


DrC_02006

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02006
         (193 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P25795|AL7A1_PEA  Aldehyde dehydrogenase family 7 member ...    60   2e-09
sp|Q9SYG7|AL7A1_ARATH  Aldehyde dehydrogenase family 7 membe...    59   5e-09
sp|Q9ZPB7|AL7A1_MALDO  Aldehyde dehydrogenase family 7 membe...    59   5e-09
sp|P46562|AL7A1_CAEEL  Putative aldehyde dehydrogenase famil...    57   1e-08
sp|P49419|AL7A1_HUMAN  Aldehyde dehydrogenase family 7 membe...    56   3e-08
sp|Q9DBF1|AL7A1_MOUSE  Aldehyde dehydrogenase family 7 membe...    55   4e-08
sp|Q64057|AL7A1_RAT  Aldehyde dehydrogenase family 7 member ...    55   5e-08
sp|P83401|AL7A1_DICDI  Putative aldehyde dehydrogenase famil...    48   8e-06
sp|Q41247|AL7A1_BRANA  Aldehyde dehydrogenase family 7 membe...    37   0.011
sp|P26805|GAG_MLVFP  Gag polyprotein (Core polyprotein) [Con...    28   6.7  
>sp|P25795|AL7A1_PEA Aldehyde dehydrogenase family 7 member A1 (Turgor-responsive
           protein 26G) (Antiquitin-1)
          Length = 508

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 33/62 (53%), Positives = 34/62 (54%)
 Frame = +2

Query: 5   ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
           +CGIV VNI T GAEI                    WKQYM RSTCTI  GSEL LAQGI
Sbjct: 446 DCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGI 505

Query: 185 VF 190
            F
Sbjct: 506 NF 507
>sp|Q9SYG7|AL7A1_ARATH Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1)
          Length = 508

 Score = 58.5 bits (140), Expect = 5e-09
 Identities = 32/62 (51%), Positives = 34/62 (54%)
 Frame = +2

Query: 5   ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
           +CGIV VNI T GAEI                    WKQYM RSTCTI  G+EL LAQGI
Sbjct: 446 DCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGNELPLAQGI 505

Query: 185 VF 190
            F
Sbjct: 506 NF 507
>sp|Q9ZPB7|AL7A1_MALDO Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1) (Matured
           fruit 60 kDa protein) (MF-60)
          Length = 508

 Score = 58.5 bits (140), Expect = 5e-09
 Identities = 32/62 (51%), Positives = 34/62 (54%)
 Frame = +2

Query: 5   ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
           +CGIV VNI T GAEI                    WKQYM RSTCTI  G+EL LAQGI
Sbjct: 446 DCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGTELPLAQGI 505

Query: 185 VF 190
            F
Sbjct: 506 NF 507
>sp|P46562|AL7A1_CAEEL Putative aldehyde dehydrogenase family 7 member A1 homolog
          Length = 514

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 31/63 (49%), Positives = 33/63 (52%)
 Frame = +2

Query: 5   ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
           +CGIV VNI T GAEI                    W+QYM RSTCTI    EL LAQGI
Sbjct: 452 DCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWRQYMRRSTCTINYSKELPLAQGI 511

Query: 185 VFE 193
            FE
Sbjct: 512 KFE 514
>sp|P49419|AL7A1_HUMAN Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1)
          Length = 511

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 30/63 (47%), Positives = 33/63 (52%)
 Frame = +2

Query: 5   ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
           +CGIV VNI T GAEI                    WKQYM RSTCTI    +L LAQGI
Sbjct: 449 DCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINYSKDLPLAQGI 508

Query: 185 VFE 193
            F+
Sbjct: 509 KFQ 511
>sp|Q9DBF1|AL7A1_MOUSE Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1)
          Length = 511

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 30/63 (47%), Positives = 33/63 (52%)
 Frame = +2

Query: 5   ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
           +CGIV VNI T GAEI                    WKQYM RSTCTI   + L LAQGI
Sbjct: 449 DCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINYSTSLPLAQGI 508

Query: 185 VFE 193
            F+
Sbjct: 509 KFQ 511
>sp|Q64057|AL7A1_RAT Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1)
          Length = 228

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 30/63 (47%), Positives = 33/63 (52%)
 Frame = +2

Query: 5   ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
           +CGIV VNI T GAEI                    WKQYM RSTCTI   + L LAQGI
Sbjct: 166 DCGIVNVNIPTSGAEIGGAFGGEKHTGSGRESGSDAWKQYMRRSTCTINYSTALPLAQGI 225

Query: 185 VFE 193
            F+
Sbjct: 226 KFQ 228
>sp|P83401|AL7A1_DICDI Putative aldehyde dehydrogenase family 7 member A1 homolog
           (Antiquitin-1)
          Length = 509

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 26/62 (41%), Positives = 31/62 (50%)
 Frame = +2

Query: 5   ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
           +CGIV VN+ T GAEI                    WKQY  RST TI  G+ + L+QGI
Sbjct: 447 DCGIVNVNVATNGAEIGGAFGGEKETGGGRESGSDSWKQYCRRSTNTINYGNTMPLSQGI 506

Query: 185 VF 190
            F
Sbjct: 507 NF 508
>sp|Q41247|AL7A1_BRANA Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1) (Brassica
           turgor-responsive/drought-induced gene 26 protein)
           (Btg-26)
          Length = 494

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 20/45 (44%), Positives = 21/45 (46%)
 Frame = +2

Query: 5   ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRST 139
           +CGIV VNI T GAEI                    WKQYM RST
Sbjct: 449 DCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 493
>sp|P26805|GAG_MLVFP Gag polyprotein (Core polyprotein) [Contains: Matrix protein p15;
           RNA binding phosphoprotein p12; Capsid protein p30;
           Nucleocapsid protein p10]
          Length = 538

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -1

Query: 124 VLLPSIAPRLPPSPTHSLSPKRSL 53
           +LLP  AP LPP P  S  P+ SL
Sbjct: 107 LLLPPSAPSLPPEPPLSTPPQSSL 130
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,838,887
Number of Sequences: 369166
Number of extensions: 289683
Number of successful extensions: 1154
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 68,354,980
effective HSP length: 35
effective length of database: 61,889,255
effective search space used: 1732899140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)