Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02006
(193 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P25795|AL7A1_PEA Aldehyde dehydrogenase family 7 member ... 60 2e-09
sp|Q9SYG7|AL7A1_ARATH Aldehyde dehydrogenase family 7 membe... 59 5e-09
sp|Q9ZPB7|AL7A1_MALDO Aldehyde dehydrogenase family 7 membe... 59 5e-09
sp|P46562|AL7A1_CAEEL Putative aldehyde dehydrogenase famil... 57 1e-08
sp|P49419|AL7A1_HUMAN Aldehyde dehydrogenase family 7 membe... 56 3e-08
sp|Q9DBF1|AL7A1_MOUSE Aldehyde dehydrogenase family 7 membe... 55 4e-08
sp|Q64057|AL7A1_RAT Aldehyde dehydrogenase family 7 member ... 55 5e-08
sp|P83401|AL7A1_DICDI Putative aldehyde dehydrogenase famil... 48 8e-06
sp|Q41247|AL7A1_BRANA Aldehyde dehydrogenase family 7 membe... 37 0.011
sp|P26805|GAG_MLVFP Gag polyprotein (Core polyprotein) [Con... 28 6.7
>sp|P25795|AL7A1_PEA Aldehyde dehydrogenase family 7 member A1 (Turgor-responsive
protein 26G) (Antiquitin-1)
Length = 508
Score = 59.7 bits (143), Expect = 2e-09
Identities = 33/62 (53%), Positives = 34/62 (54%)
Frame = +2
Query: 5 ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
+CGIV VNI T GAEI WKQYM RSTCTI GSEL LAQGI
Sbjct: 446 DCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGI 505
Query: 185 VF 190
F
Sbjct: 506 NF 507
>sp|Q9SYG7|AL7A1_ARATH Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1)
Length = 508
Score = 58.5 bits (140), Expect = 5e-09
Identities = 32/62 (51%), Positives = 34/62 (54%)
Frame = +2
Query: 5 ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
+CGIV VNI T GAEI WKQYM RSTCTI G+EL LAQGI
Sbjct: 446 DCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGNELPLAQGI 505
Query: 185 VF 190
F
Sbjct: 506 NF 507
>sp|Q9ZPB7|AL7A1_MALDO Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1) (Matured
fruit 60 kDa protein) (MF-60)
Length = 508
Score = 58.5 bits (140), Expect = 5e-09
Identities = 32/62 (51%), Positives = 34/62 (54%)
Frame = +2
Query: 5 ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
+CGIV VNI T GAEI WKQYM RSTCTI G+EL LAQGI
Sbjct: 446 DCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGTELPLAQGI 505
Query: 185 VF 190
F
Sbjct: 506 NF 507
>sp|P46562|AL7A1_CAEEL Putative aldehyde dehydrogenase family 7 member A1 homolog
Length = 514
Score = 57.0 bits (136), Expect = 1e-08
Identities = 31/63 (49%), Positives = 33/63 (52%)
Frame = +2
Query: 5 ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
+CGIV VNI T GAEI W+QYM RSTCTI EL LAQGI
Sbjct: 452 DCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWRQYMRRSTCTINYSKELPLAQGI 511
Query: 185 VFE 193
FE
Sbjct: 512 KFE 514
>sp|P49419|AL7A1_HUMAN Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1)
Length = 511
Score = 55.8 bits (133), Expect = 3e-08
Identities = 30/63 (47%), Positives = 33/63 (52%)
Frame = +2
Query: 5 ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
+CGIV VNI T GAEI WKQYM RSTCTI +L LAQGI
Sbjct: 449 DCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINYSKDLPLAQGI 508
Query: 185 VFE 193
F+
Sbjct: 509 KFQ 511
>sp|Q9DBF1|AL7A1_MOUSE Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1)
Length = 511
Score = 55.5 bits (132), Expect = 4e-08
Identities = 30/63 (47%), Positives = 33/63 (52%)
Frame = +2
Query: 5 ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
+CGIV VNI T GAEI WKQYM RSTCTI + L LAQGI
Sbjct: 449 DCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTINYSTSLPLAQGI 508
Query: 185 VFE 193
F+
Sbjct: 509 KFQ 511
>sp|Q64057|AL7A1_RAT Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1)
Length = 228
Score = 55.1 bits (131), Expect = 5e-08
Identities = 30/63 (47%), Positives = 33/63 (52%)
Frame = +2
Query: 5 ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
+CGIV VNI T GAEI WKQYM RSTCTI + L LAQGI
Sbjct: 166 DCGIVNVNIPTSGAEIGGAFGGEKHTGSGRESGSDAWKQYMRRSTCTINYSTALPLAQGI 225
Query: 185 VFE 193
F+
Sbjct: 226 KFQ 228
>sp|P83401|AL7A1_DICDI Putative aldehyde dehydrogenase family 7 member A1 homolog
(Antiquitin-1)
Length = 509
Score = 47.8 bits (112), Expect = 8e-06
Identities = 26/62 (41%), Positives = 31/62 (50%)
Frame = +2
Query: 5 ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRSTCTIACGSELSLAQGI 184
+CGIV VN+ T GAEI WKQY RST TI G+ + L+QGI
Sbjct: 447 DCGIVNVNVATNGAEIGGAFGGEKETGGGRESGSDSWKQYCRRSTNTINYGNTMPLSQGI 506
Query: 185 VF 190
F
Sbjct: 507 NF 508
>sp|Q41247|AL7A1_BRANA Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26)
Length = 494
Score = 37.4 bits (85), Expect = 0.011
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = +2
Query: 5 ECGIVYVNILTKGAEIXXXXXXXXXXXXXXXXXXXXWKQYMHRST 139
+CGIV VNI T GAEI WKQYM RST
Sbjct: 449 DCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRST 493
>sp|P26805|GAG_MLVFP Gag polyprotein (Core polyprotein) [Contains: Matrix protein p15;
RNA binding phosphoprotein p12; Capsid protein p30;
Nucleocapsid protein p10]
Length = 538
Score = 28.1 bits (61), Expect = 6.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 124 VLLPSIAPRLPPSPTHSLSPKRSL 53
+LLP AP LPP P S P+ SL
Sbjct: 107 LLLPPSAPSLPPEPPLSTPPQSSL 130
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,838,887
Number of Sequences: 369166
Number of extensions: 289683
Number of successful extensions: 1154
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 68,354,980
effective HSP length: 35
effective length of database: 61,889,255
effective search space used: 1732899140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)