Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_01983
(838 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 416 e-116
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 414 e-115
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 411 e-114
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 409 e-114
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 407 e-113
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 402 e-112
sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cy... 402 e-112
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 395 e-109
sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP... 385 e-107
sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP... 375 e-103
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 416 bits (1070), Expect = e-116
Identities = 201/279 (72%), Positives = 231/279 (82%)
Frame = +2
Query: 2 LTDPQDVARNESKTVICTKDKRATVPITKPGVTGLLGNWMDVEEFKKTVQEIYPGCMKGR 181
LTDP+DVAR ESKTVI T+++R TVPI K G++ L G WM E+F+K +PGCMKGR
Sbjct: 79 LTDPRDVARIESKTVIVTQEQRDTVPIPKTGLSQL-GRWMSEEDFEKAFNARFPGCMKGR 137
Query: 182 KMYVIPFSMGPVGGPISKCGIEVTDSAYVVVSMRIMTRIGDPVLKLLAKNVPFVKCTHSV 361
MYVIPFSMGP+G P+SK GIE+TDS YVV SMRIMTR+G PVL+ L FVKC HSV
Sbjct: 138 TMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEALGDG-EFVKCLHSV 196
Query: 362 GCPLPMTKELINNWPCNPEKLLIAHIPDDNEIMSFGSGYGGNSLLGKKCFALRIGSILGR 541
GCPLP+ K L+NNWPCNPE LIAH+PD EI+SFGSGYGGNSLLGKKCFALR+ S L +
Sbjct: 197 GCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAK 256
Query: 542 NEGWLAEHMLILGITNPKKQKKYITAAFPSACGKTNLAMLQPSLKNYKVECVGDDIAWMK 721
EGWLAEHMLILGITNP+ +KKY+ AAFPSACGKTNLAM+ PSL +KVECVGDDIAWMK
Sbjct: 257 EEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMK 316
Query: 722 FNDKGELRAINPENGFFGVAPGTSNQTNPNAMKCLQSNT 838
F+ +G LRAINPENGFFGVAPGTS +TNPNA+K +Q NT
Sbjct: 317 FDAQGHLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNT 355
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 414 bits (1065), Expect = e-115
Identities = 200/279 (71%), Positives = 231/279 (82%)
Frame = +2
Query: 2 LTDPQDVARNESKTVICTKDKRATVPITKPGVTGLLGNWMDVEEFKKTVQEIYPGCMKGR 181
LTDP+DVAR SKTVI T+++R TVPI K G++ L G WM E+F+K + +PGCMKGR
Sbjct: 79 LTDPRDVARIGSKTVIVTQEQRDTVPIPKTGLSQL-GRWMSEEDFEKALNARFPGCMKGR 137
Query: 182 KMYVIPFSMGPVGGPISKCGIEVTDSAYVVVSMRIMTRIGDPVLKLLAKNVPFVKCTHSV 361
MYVIPFSMGP+G P+SK GIE+TDS YVV SMRIMTR+G PVL+ L FVKC HSV
Sbjct: 138 TMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEALGDG-EFVKCLHSV 196
Query: 362 GCPLPMTKELINNWPCNPEKLLIAHIPDDNEIMSFGSGYGGNSLLGKKCFALRIGSILGR 541
GCPLP+ K L+NNWPCNPE LIAH+PD EI+SFGSGYGGNSLLGKKCFALR+ S L +
Sbjct: 197 GCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAK 256
Query: 542 NEGWLAEHMLILGITNPKKQKKYITAAFPSACGKTNLAMLQPSLKNYKVECVGDDIAWMK 721
EGWLAEHMLILGITNP+ +KKY+ AAFPSACGKTNLAM+ PSL +KVECVGDDIAWMK
Sbjct: 257 EEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMK 316
Query: 722 FNDKGELRAINPENGFFGVAPGTSNQTNPNAMKCLQSNT 838
F+ +G LRAINPENGFFGVAPGTS +TNPNA+K +Q NT
Sbjct: 317 FDAQGHLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNT 355
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 411 bits (1056), Expect = e-114
Identities = 200/279 (71%), Positives = 228/279 (81%)
Frame = +2
Query: 2 LTDPQDVARNESKTVICTKDKRATVPITKPGVTGLLGNWMDVEEFKKTVQEIYPGCMKGR 181
LTDP+DVAR ESKTVI T+++R TVPI K G++ L G WM E+F+K +PGCMKGR
Sbjct: 79 LTDPRDVARIESKTVIITREQRDTVPIPKNGLSQL-GRWMSEEDFEKAFNIRFPGCMKGR 137
Query: 182 KMYVIPFSMGPVGGPISKCGIEVTDSAYVVVSMRIMTRIGDPVLKLLAKNVPFVKCTHSV 361
MYVIPFSMGP+G P+SK GIE+TDS YVV SMRIMTR+G VL+ L FVKC HSV
Sbjct: 138 TMYVIPFSMGPLGSPLSKIGIELTDSPYVVTSMRIMTRMGTSVLEALGDG-EFVKCLHSV 196
Query: 362 GCPLPMTKELINNWPCNPEKLLIAHIPDDNEIMSFGSGYGGNSLLGKKCFALRIGSILGR 541
GCPLP+ K L+NNW CNPE LIAH+PD EI+SFGSGYGGNSLLGKKCFALR+ S L +
Sbjct: 197 GCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAK 256
Query: 542 NEGWLAEHMLILGITNPKKQKKYITAAFPSACGKTNLAMLQPSLKNYKVECVGDDIAWMK 721
EGWLAEHMLILGITNPK QKKY AAFPSACGKTNLAM+ P+L +KVECVGDDIAWMK
Sbjct: 257 EEGWLAEHMLILGITNPKGQKKYFAAAFPSACGKTNLAMMNPTLPGWKVECVGDDIAWMK 316
Query: 722 FNDKGELRAINPENGFFGVAPGTSNQTNPNAMKCLQSNT 838
F+ +G LRAINPENGFFGVAPGTS +TNPNA+K +Q NT
Sbjct: 317 FDQQGNLRAINPENGFFGVAPGTSVRTNPNAIKTIQKNT 355
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 409 bits (1050), Expect = e-114
Identities = 198/279 (70%), Positives = 229/279 (82%)
Frame = +2
Query: 2 LTDPQDVARNESKTVICTKDKRATVPITKPGVTGLLGNWMDVEEFKKTVQEIYPGCMKGR 181
LTDP+DVAR ESKTVI T+++R TVPI K G++ L G WM E+F+K +PGCMKGR
Sbjct: 79 LTDPRDVARIESKTVIITQEQRDTVPIPKTGLSQL-GRWMSEEDFEKAFNARFPGCMKGR 137
Query: 182 KMYVIPFSMGPVGGPISKCGIEVTDSAYVVVSMRIMTRIGDPVLKLLAKNVPFVKCTHSV 361
MYVIPFSMGP+G P++K GIE+TDS YVV SMRIMTR+G VL+ L F+KC HSV
Sbjct: 138 TMYVIPFSMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGISVLEALGDG-EFIKCLHSV 196
Query: 362 GCPLPMTKELINNWPCNPEKLLIAHIPDDNEIMSFGSGYGGNSLLGKKCFALRIGSILGR 541
GCPLP+ K L+NNW CNPE LIAH+PD EI+SFGSGYGGNSLLGKKCFALRI S L +
Sbjct: 197 GCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAK 256
Query: 542 NEGWLAEHMLILGITNPKKQKKYITAAFPSACGKTNLAMLQPSLKNYKVECVGDDIAWMK 721
EGWLAEHMLILGITNP+ +KKY+ AAFPSACGKTNLAM+ PSL +KVECVGDDIAWMK
Sbjct: 257 EEGWLAEHMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMK 316
Query: 722 FNDKGELRAINPENGFFGVAPGTSNQTNPNAMKCLQSNT 838
F+ +G LRAINPENGFFGVAPGTS +TNPNA+K +Q NT
Sbjct: 317 FDAQGNLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNT 355
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 407 bits (1046), Expect = e-113
Identities = 197/279 (70%), Positives = 228/279 (81%)
Frame = +2
Query: 2 LTDPQDVARNESKTVICTKDKRATVPITKPGVTGLLGNWMDVEEFKKTVQEIYPGCMKGR 181
LTDP+DVAR ESKTVI T+++R TVPI K G + L G WM E+F+K +PGCMKGR
Sbjct: 79 LTDPRDVARIESKTVIITQEQRDTVPIPKSGQSQL-GRWMSEEDFEKAFNARFPGCMKGR 137
Query: 182 KMYVIPFSMGPVGGPISKCGIEVTDSAYVVVSMRIMTRIGDPVLKLLAKNVPFVKCTHSV 361
MYVIPFSMGP+G P++K GIE+TDS YVV SMRIMTR+G VL+ L F+KC HSV
Sbjct: 138 TMYVIPFSMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGTSVLEALGDG-EFIKCLHSV 196
Query: 362 GCPLPMTKELINNWPCNPEKLLIAHIPDDNEIMSFGSGYGGNSLLGKKCFALRIGSILGR 541
GCPLP+ K L+NNW CNPE LIAH+PD EI+SFGSGYGGNSLLGKKCFALRI S L +
Sbjct: 197 GCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAK 256
Query: 542 NEGWLAEHMLILGITNPKKQKKYITAAFPSACGKTNLAMLQPSLKNYKVECVGDDIAWMK 721
EGWLAEHMLILGITNP+ +KKY+ AAFPSACGKTNLAM+ P+L +KVECVGDDIAWMK
Sbjct: 257 EEGWLAEHMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPTLPGWKVECVGDDIAWMK 316
Query: 722 FNDKGELRAINPENGFFGVAPGTSNQTNPNAMKCLQSNT 838
F+ +G LRAINPENGFFGVAPGTS +TNPNA+K +Q NT
Sbjct: 317 FDAQGNLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNT 355
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 402 bits (1034), Expect = e-112
Identities = 191/278 (68%), Positives = 225/278 (80%)
Frame = +2
Query: 5 TDPQDVARNESKTVICTKDKRATVPITKPGVTGLLGNWMDVEEFKKTVQEIYPGCMKGRK 184
TDP+DVAR ESKTVI T +R TVP+ G G LGNWM +EF++ V E +PGCM+GR
Sbjct: 97 TDPKDVARVESKTVIVTPSQRDTVPLLAGGARGQLGNWMSPDEFQRAVDERFPGCMQGRI 156
Query: 185 MYVIPFSMGPVGGPISKCGIEVTDSAYVVVSMRIMTRIGDPVLKLLAKNVPFVKCTHSVG 364
MYV+PFSMGPVG P+S+ G+++TDSAYVV SMRIMTR+G PVL+ L F+KC HSVG
Sbjct: 157 MYVLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDG-DFIKCLHSVG 215
Query: 365 CPLPMTKELINNWPCNPEKLLIAHIPDDNEIMSFGSGYGGNSLLGKKCFALRIGSILGRN 544
PL + + WPCNPEK LI H+PD EI+SFGSGYGGNSLLGKKCFALRI S L R+
Sbjct: 216 QPLTGHGDPVGQWPCNPEKTLIGHVPDQREIVSFGSGYGGNSLLGKKCFALRIASRLARD 275
Query: 545 EGWLAEHMLILGITNPKKQKKYITAAFPSACGKTNLAMLQPSLKNYKVECVGDDIAWMKF 724
EGWLAEHMLILGITNP +K+Y+ AAFPSACGKTNLAM++P+L +KVECVGDDIAWM+F
Sbjct: 276 EGWLAEHMLILGITNPAGKKRYVAAAFPSACGKTNLAMMRPALPGWKVECVGDDIAWMRF 335
Query: 725 NDKGELRAINPENGFFGVAPGTSNQTNPNAMKCLQSNT 838
+ +G+LRAINPENGFFGVAPGTS TNPNAM +QSNT
Sbjct: 336 DSEGQLRAINPENGFFGVAPGTSAATNPNAMATIQSNT 373
>sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 402 bits (1033), Expect = e-112
Identities = 193/279 (69%), Positives = 226/279 (81%)
Frame = +2
Query: 2 LTDPQDVARNESKTVICTKDKRATVPITKPGVTGLLGNWMDVEEFKKTVQEIYPGCMKGR 181
LT+P+DVAR ESKTVI T+++R T+PI K G + LG WM E+F+K +PGCM+GR
Sbjct: 79 LTNPRDVARIESKTVIITQEQRDTIPIPKTG-SSQLGRWMSEEDFEKAFNTRFPGCMQGR 137
Query: 182 KMYVIPFSMGPVGGPISKCGIEVTDSAYVVVSMRIMTRIGDPVLKLLAKNVPFVKCTHSV 361
MYVIPFSMGP+G P++K GIE+TDS YVV SMR+MTR+G LK L N FVKC HSV
Sbjct: 138 TMYVIPFSMGPIGSPLAKIGIELTDSPYVVASMRMMTRMGTAALKALG-NGEFVKCLHSV 196
Query: 362 GCPLPMTKELINNWPCNPEKLLIAHIPDDNEIMSFGSGYGGNSLLGKKCFALRIGSILGR 541
GCPLP+ + LINNWPCNPE LIAH+PD EI+SFGSGYGGNSLLGKKCFALRI S + +
Sbjct: 197 GCPLPLKEPLINNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRIAK 256
Query: 542 NEGWLAEHMLILGITNPKKQKKYITAAFPSACGKTNLAMLQPSLKNYKVECVGDDIAWMK 721
EGWLAEHMLILGITNP+ +KKY AAFPSACGKTNLAM+ PS +K+ECVGDDIAWMK
Sbjct: 257 EEGWLAEHMLILGITNPEGEKKYFAAAFPSACGKTNLAMMNPSRPGWKIECVGDDIAWMK 316
Query: 722 FNDKGELRAINPENGFFGVAPGTSNQTNPNAMKCLQSNT 838
F++ G LRAINPENGFFGVAPGTS +TNPNA+K + NT
Sbjct: 317 FDELGNLRAINPENGFFGVAPGTSIKTNPNAIKTIFKNT 355
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 395 bits (1014), Expect = e-109
Identities = 190/278 (68%), Positives = 221/278 (79%)
Frame = +2
Query: 5 TDPQDVARNESKTVICTKDKRATVPITKPGVTGLLGNWMDVEEFKKTVQEIYPGCMKGRK 184
TDP+DVAR ESKTVI T +R TVP+ G G LGNWM +F++ V E +PGCM+GR
Sbjct: 97 TDPKDVARVESKTVIVTPSQRDTVPLPPGGARGQLGNWMSPADFQRAVDERFPGCMQGRT 156
Query: 185 MYVIPFSMGPVGGPISKCGIEVTDSAYVVVSMRIMTRIGDPVLKLLAKNVPFVKCTHSVG 364
MYV+PFSMGPVG P+S+ G+++TDSAYVV SMRIMTR+G PVL+ L FVKC HSVG
Sbjct: 157 MYVLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDG-DFVKCLHSVG 215
Query: 365 CPLPMTKELINNWPCNPEKLLIAHIPDDNEIMSFGSGYGGNSLLGKKCFALRIGSILGRN 544
PL E ++ WPCNPEK LI H+PD EI+SFGSGYGGNSLLGKKCFALRI S L R+
Sbjct: 216 QPLTGQGEPVSQWPCNPEKTLIGHVPDQREIISFGSGYGGNSLLGKKCFALRIASRLARD 275
Query: 545 EGWLAEHMLILGITNPKKQKKYITAAFPSACGKTNLAMLQPSLKNYKVECVGDDIAWMKF 724
EGWLAEHMLILGIT+P +K AAFPSACGKTNLAM++P+L +KVECVGDDIAWM+F
Sbjct: 276 EGWLAEHMLILGITSPAGKKALCAAAFPSACGKTNLAMMRPALPGWKVECVGDDIAWMRF 335
Query: 725 NDKGELRAINPENGFFGVAPGTSNQTNPNAMKCLQSNT 838
+ +G LRAINPENGFFGVAPGTS TNPNAM +QSNT
Sbjct: 336 DSEGRLRAINPENGFFGVAPGTSATTNPNAMATIQSNT 373
>sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 647
Score = 385 bits (989), Expect = e-107
Identities = 188/278 (67%), Positives = 218/278 (78%)
Frame = +2
Query: 5 TDPQDVARNESKTVICTKDKRATVPITKPGVTGLLGNWMDVEEFKKTVQEIYPGCMKGRK 184
T+P DVAR ES+T ICT+ + T+P GV G LGNW+ + VQ+ +PGCMKGR
Sbjct: 105 TNPADVARVESRTFICTERREETIPTPVEGVKGTLGNWISPSDMDAAVQQRFPGCMKGRT 164
Query: 185 MYVIPFSMGPVGGPISKCGIEVTDSAYVVVSMRIMTRIGDPVLKLLAKNVPFVKCTHSVG 364
MYV+PFSMGPVG P+SK GIE+TDSAYVV SMRIMTR+G VL+ LAK FV+ HSVG
Sbjct: 165 MYVVPFSMGPVGSPLSKIGIELTDSAYVVASMRIMTRMGAAVLRQLAKKEEFVRALHSVG 224
Query: 365 CPLPMTKELINNWPCNPEKLLIAHIPDDNEIMSFGSGYGGNSLLGKKCFALRIGSILGRN 544
P E +WPC+PE+ +I H P +N I+S+GSGYGGNSLLGKKCFALRIGS + +
Sbjct: 225 APANGQVEQ-PSWPCDPERTIILHKPAENLIVSYGSGYGGNSLLGKKCFALRIGSTIAKQ 283
Query: 545 EGWLAEHMLILGITNPKKQKKYITAAFPSACGKTNLAMLQPSLKNYKVECVGDDIAWMKF 724
EGWLAEHMLILGIT+PK +KKYITAAFPSACGKTNLAML PSL NYKVECVGDDIAWMKF
Sbjct: 284 EGWLAEHMLILGITDPKGEKKYITAAFPSACGKTNLAMLNPSLANYKVECVGDDIAWMKF 343
Query: 725 NDKGELRAINPENGFFGVAPGTSNQTNPNAMKCLQSNT 838
+ +G LRAINPENGFFGVAPGTS +TNP AM + NT
Sbjct: 344 DSQGVLRAINPENGFFGVAPGTSMETNPIAMNTVFKNT 381
>sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 643
Score = 375 bits (962), Expect = e-103
Identities = 179/279 (64%), Positives = 220/279 (78%), Gaps = 1/279 (0%)
Frame = +2
Query: 5 TDPQDVARNESKTVICTKDKRATVPITKPGVTGLLGNWMDVEEFKKTVQEIYPGCMKGRK 184
TDP+DVAR ESKT + T +K +V T GV ++G WM +EF K + + +PGCM GR
Sbjct: 95 TDPRDVARVESKTWMITPEKYDSVCHTPEGVKPMMGQWMSPDEFGKELDDRFPGCMAGRT 154
Query: 185 MYVIPFSMGPVGGPISKCGIEVTDSAYVVVSMRIMTRIGDPVLKLLAKNV-PFVKCTHSV 361
MYVIP+SMGPVGGP+SK GIE+TDS YVV+ MRIMTR+G+PVLK LAKN FV+C HSV
Sbjct: 155 MYVIPYSMGPVGGPLSKIGIELTDSDYVVLCMRIMTRMGEPVLKALAKNNGEFVRCVHSV 214
Query: 362 GCPLPMTKELINNWPCNPEKLLIAHIPDDNEIMSFGSGYGGNSLLGKKCFALRIGSILGR 541
G P P+ ++IN+WPCNPEK +IAH P + EI SFGSGYGGNSLLGKKCFALRI +G
Sbjct: 215 GQPKPVATKVINHWPCNPEKTIIAHRPAEREIWSFGSGYGGNSLLGKKCFALRIAMNIGY 274
Query: 542 NEGWLAEHMLILGITNPKKQKKYITAAFPSACGKTNLAMLQPSLKNYKVECVGDDIAWMK 721
+EGW+AEHMLI+G+T+PK +++++ AAFPSACGKTNLAML+P++ +KV +GDDIAWMK
Sbjct: 275 DEGWMAEHMLIMGVTSPKGEERFVAAAFPSACGKTNLAMLEPTIPGWKVRVIGDDIAWMK 334
Query: 722 FNDKGELRAINPENGFFGVAPGTSNQTNPNAMKCLQSNT 838
F G L AINPE GFFGVAPGTS++TNP AM Q NT
Sbjct: 335 FGADGRLYAINPEYGFFGVAPGTSHKTNPMAMASFQENT 373
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,557,132
Number of Sequences: 369166
Number of extensions: 2193359
Number of successful extensions: 6473
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6361
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8148988185
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)