Planaria EST Database


DrC_01862

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01862
         (710 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9KQH9|FABF_VIBCH  3-oxoacyl-[acyl-carrier-protein] synth...   174   3e-43
sp|P55338|FABF_VIBHA  3-oxoacyl-[acyl-carrier-protein] synth...   172   8e-43
sp|P73283|FABF_SYNY3  3-oxoacyl-[acyl-carrier-protein] synth...   170   4e-42
sp|P0AAI5|FABF_ECOLI  3-oxoacyl-[acyl-carrier-protein] synth...   166   6e-41
sp|P56902|FABF_RHIME  3-oxoacyl-[acyl-carrier-protein] synth...   164   2e-40
sp|Q8L3X9|KASM_ARATH  3-oxoacyl-[acyl-carrier-protein] synth...   162   1e-39
sp|P63457|FAB2_MYCBO  3-oxoacyl-[acyl-carrier-protein] synth...   153   4e-37
sp|P39525|CEM1_YEAST  3-oxoacyl-[acyl-carrier-protein] synth...   152   1e-36
sp|P63455|FAB1_MYCBO  3-oxoacyl-[acyl-carrier-protein] synth...   148   2e-35
sp|P43710|FABB_HAEIN  3-oxoacyl-[acyl-carrier-protein] synth...   147   2e-35
>sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase II (Beta-ketoacyl-ACP
           synthase II) (KAS II)
          Length = 414

 Score =  174 bits (440), Expect = 3e-43
 Identities = 88/201 (43%), Positives = 123/201 (61%), Gaps = 4/201 (1%)
 Frame = +1

Query: 1   DPNSASRPFDIDRSGFVMAEGAGVLILESLSHANKRGKQPLAEIVGFGQTGDGYSLVAPD 180
           +P  ASRP+D DR GFV+ +GAG+++LE   HA  RG +  AE+VGFG +GD Y + +P 
Sbjct: 215 EPQKASRPWDKDRDGFVLGDGAGIMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPS 274

Query: 181 NSGDGAYRAMKAAIESAKVEPQQISYINAHATSTPQGDYLECKAIEHLFG----KYPLVS 348
             G G   AM+AA+  A V  +QI Y+NAH TSTP GD  E K I+   G    K  LVS
Sbjct: 275 EDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVS 334

Query: 349 SFKGQLGHCLGGSGAVEAAMTIKCIIEGLIPPNCNLNQPDPMINVSLVSGGNSPIVWNNN 528
           S K   GH LG +G+VEA +T+  +++ ++PP  NL+ P+  + V LV      +    +
Sbjct: 335 STKSMTGHLLGAAGSVEAIITVMSLVDQMVPPTINLDNPEEGLGVDLVPHVARKV---ES 391

Query: 529 PKLVVKNSFGFGGTNCSVVMK 591
            +  + NSFGFGGTN S++ K
Sbjct: 392 MEYAMCNSFGFGGTNGSLIFK 412
>sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase II (Beta-ketoacyl-ACP
           synthase II) (KAS II)
          Length = 415

 Score =  172 bits (436), Expect = 8e-43
 Identities = 86/205 (41%), Positives = 124/205 (60%), Gaps = 4/205 (1%)
 Frame = +1

Query: 1   DPNSASRPFDIDRSGFVMAEGAGVLILESLSHANKRGKQPLAEIVGFGQTGDGYSLVAPD 180
           +P  ASRP+D  R GFV+ +GAGV++LE   HA  RG +  AE+VGFG +GD Y + +P 
Sbjct: 215 EPQKASRPWDKGRDGFVLGDGAGVMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPS 274

Query: 181 NSGDGAYRAMKAAIESAKVEPQQISYINAHATSTPQGDYLECKAIEHLFG----KYPLVS 348
             G G   AM+AA+  A +   Q+ Y+NAH TSTP GD  E K ++   G    K  LVS
Sbjct: 275 EDGSGGALAMEAAMRDANITGTQVGYVNAHGTSTPAGDVAEIKGVKRALGEEGSKQVLVS 334

Query: 349 SFKGQLGHCLGGSGAVEAAMTIKCIIEGLIPPNCNLNQPDPMINVSLVSGGNSPIVWNNN 528
           S K   GH LG +G+VEA +T+  +++ ++PP  NL+ P+  +++ LV      +    +
Sbjct: 335 STKSMTGHLLGAAGSVEAIITVLSLVDQIVPPTINLDDPEEGLDIDLVPHTARKV----D 390

Query: 529 PKLVVKNSFGFGGTNCSVVMKEFIE 603
            +  + NSFGFGGTN S+V K+  E
Sbjct: 391 MEYAICNSFGFGGTNGSLVFKKIAE 415
>sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase II (Beta-ketoacyl-ACP
           synthase II) (KAS II)
          Length = 416

 Score =  170 bits (430), Expect = 4e-42
 Identities = 89/202 (44%), Positives = 121/202 (59%), Gaps = 3/202 (1%)
 Frame = +1

Query: 1   DPNSASRPFDIDRSGFVMAEGAGVLILESLSHANKRGKQPLAEIVGFGQTGDGYSLVAPD 180
           DP  ASRPFD DR GFVM EG+G+LILE L  A  RG +   E+VG+  T D Y + AP 
Sbjct: 218 DPLHASRPFDKDRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPV 277

Query: 181 NSGDGAYRAMKAAIESAKVEPQQISYINAHATSTPQGDYLECKAIEHLFGKYP---LVSS 351
             G GA RA+  A++ + ++P+ +SYINAH TSTP  D  E +AI+   G +     VSS
Sbjct: 278 PDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSS 337

Query: 352 FKGQLGHCLGGSGAVEAAMTIKCIIEGLIPPNCNLNQPDPMINVSLVSGGNSPIVWNNNP 531
            K   GH LGGSG +EA  T+  I E  +PP  NL  PDP  ++  V G +  ++ +   
Sbjct: 338 TKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVD--- 394

Query: 532 KLVVKNSFGFGGTNCSVVMKEF 597
            + + NSFGFGG N ++  K++
Sbjct: 395 -VALSNSFGFGGHNVTLAFKKY 415
>sp|P0AAI5|FABF_ECOLI 3-oxoacyl-[acyl-carrier-protein] synthase II (Beta-ketoacyl-ACP
           synthase II) (KAS II)
 sp|P0AAI8|FABF_SHIFL 3-oxoacyl-[acyl-carrier-protein] synthase II (Beta-ketoacyl-ACP
           synthase II) (KAS II)
 sp|P0AAI6|FABF_ECOL6 3-oxoacyl-[acyl-carrier-protein] synthase II (Beta-ketoacyl-ACP
           synthase II) (KAS II)
 sp|P0AAI7|FABF_ECO57 3-oxoacyl-[acyl-carrier-protein] synthase II (Beta-ketoacyl-ACP
           synthase II) (KAS II)
          Length = 413

 Score =  166 bits (420), Expect = 6e-41
 Identities = 86/201 (42%), Positives = 124/201 (61%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   DPNSASRPFDIDRSGFVMAEGAGVLILESLSHANKRGKQPLAEIVGFGQTGDGYSLVAPD 180
           +P +ASRP+D +R GFV+ +GAG+L+LE   HA KRG +  AE+VGFG + D Y + +P 
Sbjct: 215 NPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPP 274

Query: 181 NSGDGAYRAMKAAIESAKVEPQQISYINAHATSTPQGDYLECKAIEHLFGKYP---LVSS 351
            +G GA  AM  A+  A +E  QI Y+NAH TSTP GD  E +A++ +FG+     LVSS
Sbjct: 275 ENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSS 334

Query: 352 FKGQLGHCLGGSGAVEAAMTIKCIIEGLIPPNCNLNQPDPMINVSLVSGGNSPIVWNNNP 531
            K   GH LG +GAVE+  +I  + +  +PP  NL+ PD   ++  V      +   +  
Sbjct: 335 TKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQV---SGM 391

Query: 532 KLVVKNSFGFGGTNCSVVMKE 594
           +  + NSFGFGGTN S++ K+
Sbjct: 392 EYTLCNSFGFGGTNGSLIFKK 412
>sp|P56902|FABF_RHIME 3-oxoacyl-[acyl-carrier-protein] synthase II (Beta-ketoacyl-ACP
           synthase II) (KAS II)
          Length = 421

 Score =  164 bits (416), Expect = 2e-40
 Identities = 85/202 (42%), Positives = 119/202 (58%), Gaps = 3/202 (1%)
 Frame = +1

Query: 1   DPNSASRPFDIDRSGFVMAEGAGVLILESLSHANKRGKQPLAEIVGFGQTGDGYSLVAPD 180
           +P  ASRP+D DR GFVM EGAG+++LE L HA  RG +  AE++G+G +GD + + AP 
Sbjct: 222 NPEKASRPYDADRDGFVMGEGAGIVVLEELEHARARGAKIYAEVIGYGLSGDAFHITAPS 281

Query: 181 NSGDGAYRAMKAAIESAKVEPQQISYINAHATSTPQGDYLECKAIEHLFGKYP---LVSS 351
             G+GAYR M+ A++ A V    I YINAH TST   D +E  A+E L G       +SS
Sbjct: 282 EDGEGAYRCMQMALKRAGVTAADIDYINAHGTST-MADTIELGAVERLVGDSASRISMSS 340

Query: 352 FKGQLGHCLGGSGAVEAAMTIKCIIEGLIPPNCNLNQPDPMINVSLVSGGNSPIVWNNNP 531
            K  +GH LG +GAVEA  +   I + + PP  NL+ P     + LV      +      
Sbjct: 341 TKSAIGHLLGAAGAVEAIFSALAIRDNIAPPTLNLDNPSVETKIDLV----PHVARKREI 396

Query: 532 KLVVKNSFGFGGTNCSVVMKEF 597
            + + NSFGFGGTN S++++ +
Sbjct: 397 NVALSNSFGFGGTNASLILRRY 418
>sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial precursor
           (Beta-ketoacyl-ACP synthase) (mtKAS)
          Length = 461

 Score =  162 bits (409), Expect = 1e-39
 Identities = 85/201 (42%), Positives = 119/201 (59%), Gaps = 7/201 (3%)
 Frame = +1

Query: 4   PNSASRPFDIDRSGFVMAEGAGVLILESLSHANKRGKQPLAEIVGFGQTGDGYSLVAPDN 183
           P  ASRPFD DR GFV+ EG+GV++LE   HA +RG +  AE+ G+G +GD + +  P  
Sbjct: 262 PQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPE 321

Query: 184 SGDGAYRAMKAAIESAKVEPQQISYINAHATSTPQGDYLECKAIEHLFGKYP-----LVS 348
            G GA  AM  A+  + + P QI Y+NAHATSTP GD +E +AI+ +F ++        S
Sbjct: 322 DGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFS 381

Query: 349 SFKGQLGHCLGGSGAVEAAMTIKCIIEGLIPPNCNLNQPDPMINVSLVSGGNSPIVWNNN 528
           S KG  GH LG +GAVEA  +I  I  G+ P   N+  PDP+ +   +     P+  +  
Sbjct: 382 STKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFM-----PLTTSKK 436

Query: 529 --PKLVVKNSFGFGGTNCSVV 585
              +  + NSFGFGGTN S++
Sbjct: 437 MLVRTAMSNSFGFGGTNASLL 457
>sp|P63457|FAB2_MYCBO 3-oxoacyl-[acyl-carrier-protein] synthase 2 (Beta-ketoacyl-ACP
           synthase 2) (KAS 2)
 sp|P63456|FAB2_MYCTU 3-oxoacyl-[acyl-carrier-protein] synthase 2 (Beta-ketoacyl-ACP
           synthase 2) (KAS 2)
          Length = 417

 Score =  153 bits (387), Expect = 4e-37
 Identities = 84/200 (42%), Positives = 117/200 (58%), Gaps = 1/200 (0%)
 Frame = +1

Query: 1   DPNSASRPFDIDRSGFVMAEGAGVLILESLSHANKRGKQPLAEIVGFGQTGDGYSLVAPD 180
           DP  A RPFD DR GFV  EG  +L++E+  HA  RG   LA I+G   T DG+ +VAPD
Sbjct: 222 DPAGACRPFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPD 281

Query: 181 NSGDGAYRAMKAAIESAKVEPQQISYINAHATSTPQGDYLECKAIEH-LFGKYPLVSSFK 357
            +G+ A  A+  AI+ A + P  I ++NAHAT T  GD  E +AI + L G  P V + K
Sbjct: 282 PNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGNRPAVYAPK 341

Query: 358 GQLGHCLGGSGAVEAAMTIKCIIEGLIPPNCNLNQPDPMINVSLVSGGNSPIVWNNNPKL 537
             LGH +G  GAVE+ +T+  + + +IPP  NL   DP I++ +V+G   P     N + 
Sbjct: 342 SALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEPRP----GNYRY 397

Query: 538 VVKNSFGFGGTNCSVVMKEF 597
            + NSFGFGG N ++    +
Sbjct: 398 AINNSFGFGGHNVAIAFGRY 417
>sp|P39525|CEM1_YEAST 3-oxoacyl-[acyl-carrier-protein] synthase homolog
           (Beta-ketoacyl-ACP synthase homolog)
          Length = 442

 Score =  152 bits (383), Expect = 1e-36
 Identities = 85/206 (41%), Positives = 122/206 (59%), Gaps = 9/206 (4%)
 Frame = +1

Query: 7   NSASRPFDIDRSGFVMAEGAGVLILESLSHANKRGKQPLAEIVGFGQTGDGYSLVAPDNS 186
           N  SRPFD  RSGFV+ EG G++++ESL HA KR    ++E+VG+G + D   + +P   
Sbjct: 235 NGISRPFDTQRSGFVLGEGCGMIVMESLEHAQKRNANIISELVGYGLSSDACHITSPPAD 294

Query: 187 GDGAYRAMKAAIESAKVEPQQISYINAHATSTPQGDYLECKAIEHLF------GKYPLVS 348
           G+GA RA++ A++ A++EP  + Y+NAHATST  GD  EC A+           K   +S
Sbjct: 295 GNGAKRAIEMALKMARLEPTDVDYVNAHATSTLLGDKAECLAVASALLPGRSKSKPLYIS 354

Query: 349 SFKGQLGHCLGGSGAVEAAMTIKCIIEGLIPPNCNLNQPDPMIN---VSLVSGGNSPIVW 519
           S KG +GH LG +GAVE+  TI  + +  +P   NL+    + N     L    + PIV 
Sbjct: 355 SNKGAIGHLLGAAGAVESIFTICSLKDDKMPHTLNLDNVLTLENNEADKLHFIRDKPIV- 413

Query: 520 NNNPKLVVKNSFGFGGTNCSVVMKEF 597
             NPK  + NSFGFGG N S++ K++
Sbjct: 414 GANPKYALCNSFGFGGVNTSLLFKKW 439
>sp|P63455|FAB1_MYCBO 3-oxoacyl-[acyl-carrier-protein] synthase 1 (Beta-ketoacyl-ACP
           synthase 1) (KAS 1)
 sp|P63454|FAB1_MYCTU 3-oxoacyl-[acyl-carrier-protein] synthase 1 (Beta-ketoacyl-ACP
           synthase 1) (KAS 1)
          Length = 416

 Score =  148 bits (373), Expect = 2e-35
 Identities = 78/199 (39%), Positives = 113/199 (56%)
 Frame = +1

Query: 1   DPNSASRPFDIDRSGFVMAEGAGVLILESLSHANKRGKQPLAEIVGFGQTGDGYSLVAPD 180
           +P  ASRPFD DR GFV  E   ++++E+  HA  RG +PLA ++G G T D + +VAP 
Sbjct: 222 EPERASRPFDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPA 281

Query: 181 NSGDGAYRAMKAAIESAKVEPQQISYINAHATSTPQGDYLECKAIEHLFGKYPLVSSFKG 360
             G  A RAM  ++E A + P  I ++NAH T+TP GD  E  AI         V + K 
Sbjct: 282 ADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCDQAAVYAPKS 341

Query: 361 QLGHCLGGSGAVEAAMTIKCIIEGLIPPNCNLNQPDPMINVSLVSGGNSPIVWNNNPKLV 540
            LGH +G  GA+E+ +T+  + +G+IPP  N   PDP I++ +V+G         + +  
Sbjct: 342 ALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGEPR----YGDYRYA 397

Query: 541 VKNSFGFGGTNCSVVMKEF 597
           V NSFGFGG N ++    +
Sbjct: 398 VNNSFGFGGHNVALAFGRY 416
>sp|P43710|FABB_HAEIN 3-oxoacyl-[acyl-carrier-protein] synthase I (Beta-ketoacyl-ACP
           synthase I) (KAS I)
          Length = 406

 Score =  147 bits (372), Expect = 2e-35
 Identities = 88/201 (43%), Positives = 114/201 (56%), Gaps = 3/201 (1%)
 Frame = +1

Query: 4   PNSASRPFDIDRSGFVMAEGAGVLILESLSHANKRGKQPLAEIVGFGQTGDGYSLVAPDN 183
           P  ASR +D +R GFV+A G  V+++E L HA  RG +  AEIVG+G T DGY +VAP  
Sbjct: 214 PEKASRAYDANRDGFVIAGGGAVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP-- 271

Query: 184 SGDGAYRAMKAAIESAKVEPQQISYINAHATSTPQGDYLECKAIEHLFG-KYPLVSSFKG 360
           SG+GA R MK A+ +       I YIN H TSTP GD  E  AI+++FG K P +SS K 
Sbjct: 272 SGEGAERCMKQAMATVDT---PIDYINVHGTSTPVGDVKELGAIKNVFGDKIPAISSTKS 328

Query: 361 QLGHCLGGSGAVEAAMTIKCIIEGLIPPNCNLNQPDPMINVSLVSGGNSPIVWNNNPKL- 537
             GH LG +GA EA  T+  +    I P+ N+   D         G N       N  L 
Sbjct: 329 MTGHSLGAAGAHEAIYTLLMLDNDFIAPSINIETLD-----EAAEGCNIVTETKENAGLQ 383

Query: 538 -VVKNSFGFGGTNCSVVMKEF 597
            V+ NSFGFGGTN +++ K +
Sbjct: 384 TVMSNSFGFGGTNATLIFKRY 404
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,347,510
Number of Sequences: 369166
Number of extensions: 1759732
Number of successful extensions: 5571
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5201
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6267895215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)