Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_01852
(835 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8TFN0|NDK_EMENI Nucleoside diphosphate kinase (NDK) (ND... 119 1e-26
sp|P27950|NDK_GINCI Nucleoside diphosphate kinase (NDK) (ND... 117 4e-26
sp|O64903|NDK2_ARATH Nucleoside diphosphate kinase II, chlo... 114 3e-25
sp|P08879|NDKA_DROME Nucleoside diphosphate kinase (NDK) (N... 113 6e-25
sp|Q67NR4|NDK_SYMTH Nucleoside diphosphate kinase (NDK) (ND... 113 6e-25
sp|Q6XI71|NDKA_DROYA Nucleoside diphosphate kinase (NDK) (N... 113 6e-25
sp|P70011|NDKA2_XENLA Nucleoside diphosphate kinase A2 (NDK... 112 1e-24
sp|P70010|NDKA1_XENLA Nucleoside diphosphate kinase A1 (NDK... 112 1e-24
sp|P15531|NDKA_HUMAN Nucleoside diphosphate kinase A (NDK A... 112 1e-24
sp|Q13232|NDK3_HUMAN Nucleoside diphosphate kinase 3 (NDK 3... 112 2e-24
>sp|Q8TFN0|NDK_EMENI Nucleoside diphosphate kinase (NDK) (NDP kinase) (AnNDK)
Length = 153
Score = 119 bits (297), Expect = 1e-26
Identities = 52/83 (62%), Positives = 67/83 (80%)
Frame = +3
Query: 9 ERSYIMVKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKL 188
E+++I +KPDGVQRGLVG II+RFE RGFKL A+K+ P + LLE HY +LK+KPFFP L
Sbjct: 4 EQTFIAIKPDGVQRGLVGPIISRFENRGFKLAAMKLTSPSRSLLEQHYSDLKEKPFFPGL 63
Query: 189 IEYMLSGPVVCMVWQGYEVISCG 257
+ YMLSGP+V MVW+G +V+ G
Sbjct: 64 VTYMLSGPIVAMVWEGKDVVKTG 86
Score = 95.5 bits (236), Expect = 2e-19
Identities = 45/70 (64%), Positives = 54/70 (77%)
Frame = +2
Query: 284 MVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEY 463
+VK GR +LGAT P+ S PGTIRGDFA GRN+ HGSDSVESAK+EIGLWFT +++ Y
Sbjct: 82 VVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDSVESAKKEIGLWFTPEEIQNY 141
Query: 464 KLCADIWVQE 493
KL A W+ E
Sbjct: 142 KLNAFGWIYE 151
>sp|P27950|NDK_GINCI Nucleoside diphosphate kinase (NDK) (NDP kinase)
Length = 151
Score = 117 bits (293), Expect = 4e-26
Identities = 54/83 (65%), Positives = 66/83 (79%)
Frame = +3
Query: 9 ERSYIMVKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKL 188
ER++I VKPDGVQR +VG +I RFEQ+GFKL+A+K +Q K LLE HY EL DKPF+PKL
Sbjct: 4 ERTFIAVKPDGVQRCIVGEVIKRFEQKGFKLVAMKFLQAPKDLLEKHYCELSDKPFYPKL 63
Query: 189 IEYMLSGPVVCMVWQGYEVISCG 257
I+YM SGPVV MVW+G V+ G
Sbjct: 64 IKYMSSGPVVAMVWEGLNVVKTG 86
Score = 95.5 bits (236), Expect = 2e-19
Identities = 44/70 (62%), Positives = 52/70 (74%)
Frame = +2
Query: 284 MVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEY 463
+VK GR +LG T P DS PGTIRGDF GRNI+HGSDSVESAK+EI LWF ++L EY
Sbjct: 82 VVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAKKEISLWFKREELVEY 141
Query: 464 KLCADIWVQE 493
+ CA W+ E
Sbjct: 142 QNCAQDWIYE 151
>sp|O64903|NDK2_ARATH Nucleoside diphosphate kinase II, chloroplast precursor (NDK II)
(NDP kinase II) (NDPK II) (NDPK Ia)
Length = 231
Score = 114 bits (286), Expect = 3e-25
Identities = 52/81 (64%), Positives = 65/81 (80%)
Frame = +3
Query: 9 ERSYIMVKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKL 188
E +YIMVKPDG+QRGLVG II+RFE++GFKLI +KM Q K+L E HY++L K FFP L
Sbjct: 84 EETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNL 143
Query: 189 IEYMLSGPVVCMVWQGYEVIS 251
IEY+ SGPVVCM W+G V++
Sbjct: 144 IEYITSGPVVCMAWEGVGVVA 164
Score = 74.7 bits (182), Expect = 3e-13
Identities = 36/70 (51%), Positives = 46/70 (65%)
Frame = +2
Query: 284 MVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEY 463
+V R L+G T P+ + PGTIRGD A GRNIVHGSDS E+ KREIGLWF +L ++
Sbjct: 162 VVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGLWFKEGELCKW 221
Query: 464 KLCADIWVQE 493
W++E
Sbjct: 222 DSALATWLRE 231
>sp|P08879|NDKA_DROME Nucleoside diphosphate kinase (NDK) (NDP kinase) (Abnormal wing
disks protein) (Killer of prune protein)
Length = 153
Score = 113 bits (283), Expect = 6e-25
Identities = 53/83 (63%), Positives = 64/83 (77%)
Frame = +3
Query: 9 ERSYIMVKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKL 188
ER++IMVKPDGVQRGLVG II RFEQ+GFKL+A+K K+LLE HY +L +PFFP L
Sbjct: 6 ERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGL 65
Query: 189 IEYMLSGPVVCMVWQGYEVISCG 257
+ YM SGPVV MVW+G V+ G
Sbjct: 66 VNYMNSGPVVPMVWEGLNVVKTG 88
Score = 89.7 bits (221), Expect = 9e-18
Identities = 42/70 (60%), Positives = 51/70 (72%)
Frame = +2
Query: 284 MVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEY 463
+VK GR +LGAT P DSLPGTIRGDF GRNI+HGSD+VESA++EI LWF K+L +
Sbjct: 84 VVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTW 143
Query: 464 KLCADIWVQE 493
A W+ E
Sbjct: 144 TPAAKDWIYE 153
>sp|Q67NR4|NDK_SYMTH Nucleoside diphosphate kinase (NDK) (NDP kinase) (Nucleoside-2-P
kinase)
Length = 150
Score = 113 bits (283), Expect = 6e-25
Identities = 50/81 (61%), Positives = 66/81 (81%)
Frame = +3
Query: 9 ERSYIMVKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKL 188
ERS++MVKPDGVQRGL+G +I+R E+RG KL+A K+M+ ++L E HY +LKDKPFFP L
Sbjct: 2 ERSFVMVKPDGVQRGLIGEVISRLERRGLKLVAAKLMRVSRELAEEHYAQLKDKPFFPSL 61
Query: 189 IEYMLSGPVVCMVWQGYEVIS 251
IE++ SGPV+ MVW+G IS
Sbjct: 62 IEFITSGPVMAMVWEGPNAIS 82
Score = 62.0 bits (149), Expect = 2e-09
Identities = 32/67 (47%), Positives = 40/67 (59%)
Frame = +2
Query: 287 VKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEYK 466
+ I R +GAT P ++ PGTIR DFA N+VHGSD ESA+REI LWF + Y
Sbjct: 81 ISIIRKTMGATNPANAEPGTIRADFACDVSYNVVHGSDGPESAEREIRLWFGEVE-PSYS 139
Query: 467 LCADIWV 487
D W+
Sbjct: 140 RSVDRWI 146
>sp|Q6XI71|NDKA_DROYA Nucleoside diphosphate kinase (NDK) (NDP kinase) (Abnormal wing
disks protein)
Length = 150
Score = 113 bits (283), Expect = 6e-25
Identities = 53/83 (63%), Positives = 64/83 (77%)
Frame = +3
Query: 9 ERSYIMVKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKL 188
ER++IMVKPDGVQRGLVG II RFEQ+GFKL+A+K K+LLE HY +L +PFFP L
Sbjct: 3 ERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGL 62
Query: 189 IEYMLSGPVVCMVWQGYEVISCG 257
+ YM SGPVV MVW+G V+ G
Sbjct: 63 VNYMNSGPVVPMVWEGLNVVKTG 85
Score = 89.7 bits (221), Expect = 9e-18
Identities = 42/70 (60%), Positives = 51/70 (72%)
Frame = +2
Query: 284 MVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEY 463
+VK GR +LGAT P DSLPGTIRGDF GRNI+HGSD+VESA++EI LWF K+L +
Sbjct: 81 VVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTW 140
Query: 464 KLCADIWVQE 493
A W+ E
Sbjct: 141 TPAAKDWIYE 150
>sp|P70011|NDKA2_XENLA Nucleoside diphosphate kinase A2 (NDK A2) (NDP kinase A2)
(NM23/nucleoside diphosphate kinase A2)
Length = 154
Score = 112 bits (281), Expect = 1e-24
Identities = 49/83 (59%), Positives = 66/83 (79%)
Frame = +3
Query: 9 ERSYIMVKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKL 188
ER++I +KPDGVQRGL+G II RFEQ+GF+L+A+K +Q + LL HY +LKD+PF+P L
Sbjct: 6 ERTFIAIKPDGVQRGLMGDIIKRFEQKGFRLVAMKFLQASQDLLRQHYIDLKDRPFYPGL 65
Query: 189 IEYMLSGPVVCMVWQGYEVISCG 257
+EYM SGPV+ MVW+G V+ G
Sbjct: 66 VEYMNSGPVLAMVWEGLNVVKTG 88
Score = 90.9 bits (224), Expect = 4e-18
Identities = 43/70 (61%), Positives = 50/70 (71%)
Frame = +2
Query: 284 MVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEY 463
+VK GR +LG T P DS PGTIRGD GRNI+HGSDSV+SA +EI LWF ++L EY
Sbjct: 84 VVKTGRVMLGETNPADSKPGTIRGDLCIQVGRNIIHGSDSVDSANKEIALWFKDEELVEY 143
Query: 464 KLCADIWVQE 493
K CA WV E
Sbjct: 144 KSCAYEWVYE 153
>sp|P70010|NDKA1_XENLA Nucleoside diphosphate kinase A1 (NDK A1) (NDP kinase A1)
(NM23/nucleoside diphosphate kinase A1)
Length = 154
Score = 112 bits (280), Expect = 1e-24
Identities = 49/83 (59%), Positives = 65/83 (78%)
Frame = +3
Query: 9 ERSYIMVKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKL 188
ER++I +KPDGVQRGL+G II RFEQ+GF+L+A+K Q + LL HY +LKD+PF+P L
Sbjct: 6 ERTFIAIKPDGVQRGLMGDIIKRFEQKGFRLVAMKFQQASQDLLRQHYIDLKDRPFYPGL 65
Query: 189 IEYMLSGPVVCMVWQGYEVISCG 257
+EYM SGPV+ MVW+G V+ G
Sbjct: 66 VEYMSSGPVLAMVWEGLNVVKTG 88
Score = 90.9 bits (224), Expect = 4e-18
Identities = 44/70 (62%), Positives = 50/70 (71%)
Frame = +2
Query: 284 MVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEY 463
+VK GR +LG T P DS PGTIRGDF GRNI+HGSDSVESA +EI LWF ++L E
Sbjct: 84 VVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESANKEIALWFKDEELVEN 143
Query: 464 KLCADIWVQE 493
K CA WV E
Sbjct: 144 KSCAYEWVYE 153
>sp|P15531|NDKA_HUMAN Nucleoside diphosphate kinase A (NDK A) (NDP kinase A) (Tumor
metastatic process-associated protein) (Metastasis
inhibition factor nm23) (nm23-H1) (Granzyme A-activated
DNase) (GAAD)
Length = 152
Score = 112 bits (280), Expect = 1e-24
Identities = 50/83 (60%), Positives = 65/83 (78%)
Frame = +3
Query: 9 ERSYIMVKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKL 188
ER++I +KPDGVQRGLVG II RFEQ+GF+L+ +K MQ + LL+ HY +LKD+PFF L
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGL 64
Query: 189 IEYMLSGPVVCMVWQGYEVISCG 257
++YM SGPVV MVW+G V+ G
Sbjct: 65 VKYMHSGPVVAMVWEGLNVVKTG 87
Score = 94.4 bits (233), Expect = 4e-19
Identities = 43/70 (61%), Positives = 52/70 (74%)
Frame = +2
Query: 284 MVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEY 463
+VK GR +LG T P DS PGTIRGDF GRNI+HGSDSVESA++EIGLWF ++L +Y
Sbjct: 83 VVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFHPEELVDY 142
Query: 464 KLCADIWVQE 493
CA W+ E
Sbjct: 143 TSCAQNWIYE 152
>sp|Q13232|NDK3_HUMAN Nucleoside diphosphate kinase 3 (NDK 3) (NDP kinase 3) (Nucleoside
diphosphate kinase C) (NDPKC) (nm23-H3) (DR-nm23)
Length = 169
Score = 112 bits (279), Expect = 2e-24
Identities = 47/81 (58%), Positives = 68/81 (83%)
Frame = +3
Query: 6 HERSYIMVKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPK 185
HER+++ VKPDGVQR LVG I+ RFE++GFKL+A+K++Q ++LL HY EL+++PF+ +
Sbjct: 21 HERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGR 80
Query: 186 LIEYMLSGPVVCMVWQGYEVI 248
L++YM SGPVV MVWQG +V+
Sbjct: 81 LVKYMASGPVVAMVWQGLDVV 101
Score = 82.0 bits (201), Expect = 2e-15
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +2
Query: 284 MVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEY 463
+V+ RAL+GAT P D+ PGTIRGDF G+N++HGSDSVESA+REI LWF A +L +
Sbjct: 100 VVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADELLCW 159
Query: 464 KLCADIWVQE 493
+ A W+ E
Sbjct: 160 EDSAGHWLYE 169
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,514,816
Number of Sequences: 369166
Number of extensions: 2051759
Number of successful extensions: 4702
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4686
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8100769320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)