Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_01776
(686 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O18158|OGT1_CAEEL UDP-N-acetylglucosamine--peptide N-ace... 41 0.003
sp|Q96AY4|K1043_HUMAN TPR repeat-containing protein KIAA1043 38 0.022
sp|O15294|OGT1_HUMAN UDP-N-acetylglucosamine--peptide N-ace... 37 0.049
sp|P56558|OGT1_RAT UDP-N-acetylglucosamine--peptide N-acety... 37 0.049
sp|Q5BK48|TTC5_RAT Tetratricopeptide repeat protein 5 (TPR ... 35 0.14
sp|Q99LG4|TTC5_MOUSE Tetratricopeptide repeat protein 5 (TP... 34 0.32
sp|P16522|CDC23_YEAST Anaphase promoting complex subunit CD... 34 0.41
sp|Q8N0Z6|TTC5_HUMAN Tetratricopeptide repeat protein 5 (TP... 33 0.54
sp|O34327|RAPJ_BACSU Response regulator aspartate phosphata... 33 0.70
sp|Q86TV6|TTC7B_HUMAN Tetratricopeptide repeat protein 7B (... 33 0.70
>sp|O18158|OGT1_CAEEL UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
(O-GlcNAc) (OGT)
Length = 1151
Score = 41.2 bits (95), Expect = 0.003
Identities = 30/103 (29%), Positives = 48/103 (46%)
Frame = +2
Query: 53 AQYHLILAKMHLGMGAYEEAEANLLETVQITFDKADAWAQFGHLKFIVGDEQAAESCFSR 232
A H LA + G +A + E ++I ADA++ G+ +GD AA +C++R
Sbjct: 465 AAAHSNLASILQQQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACYNR 524
Query: 233 ALNLVDDIPEPHPVYMRLASIYLIQDKYIEAKQAFLLACKNNP 361
A+ + + H LASI+ EA Q++ A K P
Sbjct: 525 AIQINPAFADAH---SNLASIHKDAGNMAEAIQSYSTALKLKP 564
>sp|Q96AY4|K1043_HUMAN TPR repeat-containing protein KIAA1043
Length = 1716
Score = 38.1 bits (87), Expect = 0.022
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Frame = +2
Query: 71 LAKMHLGMGAYEEA----EANLLETVQI--TFDKADAWAQFGHLKFIVGDEQAAESCFSR 232
L H MG+ ++A E L+ ++ F+KA A+ + G L +G+ + A SC R
Sbjct: 158 LGNGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAYGELGSLHSQLGNYEQAISCLER 217
Query: 233 ALNLVDDIPE---PHPVYMRLASIYLIQDKYIEAKQAFLLACK-----NNPTC 367
LN+ D+ + L +Y +Y A Q L + NNPTC
Sbjct: 218 QLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQIAEETNNPTC 270
>sp|O15294|OGT1_HUMAN UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit (O-GlcNAc transferase p110 subunit)
Length = 1046
Score = 37.0 bits (84), Expect = 0.049
Identities = 29/103 (28%), Positives = 47/103 (45%)
Frame = +2
Query: 53 AQYHLILAKMHLGMGAYEEAEANLLETVQITFDKADAWAQFGHLKFIVGDEQAAESCFSR 232
A H LA + G +EA + E ++I+ ADA++ G+ + D Q A C++R
Sbjct: 361 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTR 420
Query: 233 ALNLVDDIPEPHPVYMRLASIYLIQDKYIEAKQAFLLACKNNP 361
A+ + + H LASI+ EA ++ A K P
Sbjct: 421 AIQINPAFADAH---SNLASIHKDSGNIPEAIASYRTALKLKP 460
>sp|P56558|OGT1_RAT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit (O-GlcNAc transferase p110 subunit)
Length = 1036
Score = 37.0 bits (84), Expect = 0.049
Identities = 29/103 (28%), Positives = 47/103 (45%)
Frame = +2
Query: 53 AQYHLILAKMHLGMGAYEEAEANLLETVQITFDKADAWAQFGHLKFIVGDEQAAESCFSR 232
A H LA + G +EA + E ++I+ ADA++ G+ + D Q A C++R
Sbjct: 351 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTR 410
Query: 233 ALNLVDDIPEPHPVYMRLASIYLIQDKYIEAKQAFLLACKNNP 361
A+ + + H LASI+ EA ++ A K P
Sbjct: 411 AIQINPAFADAH---SNLASIHKDSGNIPEAIASYRTALKLKP 450
>sp|Q5BK48|TTC5_RAT Tetratricopeptide repeat protein 5 (TPR repeat protein 5)
Length = 440
Score = 35.4 bits (80), Expect = 0.14
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 107 EAEANLLETVQITFDKADAWAQFGHLKFIVGDEQAAESCFSRAL 238
EAE L + V++ + +AW Q G + + GD AA +CFS AL
Sbjct: 87 EAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGAL 130
>sp|Q99LG4|TTC5_MOUSE Tetratricopeptide repeat protein 5 (TPR repeat protein 5)
Length = 440
Score = 34.3 bits (77), Expect = 0.32
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 107 EAEANLLETVQITFDKADAWAQFGHLKFIVGDEQAAESCFSRAL 238
EAE L + V++ + +AW Q G + + GD +A +CFS AL
Sbjct: 87 EAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGAL 130
>sp|P16522|CDC23_YEAST Anaphase promoting complex subunit CDC23 (Cell division control
protein 23)
Length = 626
Score = 33.9 bits (76), Expect = 0.41
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +2
Query: 140 ITFDK--ADAWAQFGHLKFIVGDEQAAESCFSRALNLVDDIPEPHPVYMRLASIYLIQDK 313
+T DK +AW GH + + AA C+ RA VD P + L Y + D
Sbjct: 424 LTLDKKTTNAWTLMGHEFVELSNSHAAIECYRRA---VDICPRDFKAWFGLGQAYALLDM 480
Query: 314 YIEAKQAFLLACKNNP 361
++ + F AC P
Sbjct: 481 HLYSLYYFQKACTLKP 496
>sp|Q8N0Z6|TTC5_HUMAN Tetratricopeptide repeat protein 5 (TPR repeat protein 5)
Length = 440
Score = 33.5 bits (75), Expect = 0.54
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 107 EAEANLLETVQITFDKADAWAQFGHLKFIVGDEQAAESCFSRAL 238
+AE L + V++ + +AW Q G + + GD AA +CFS AL
Sbjct: 87 KAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGAL 130
>sp|O34327|RAPJ_BACSU Response regulator aspartate phosphatase J
Length = 373
Score = 33.1 bits (74), Expect = 0.70
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = +2
Query: 35 IFNNLRAQYHLILAKMHLGMGAYEEAEANLLETVQITFDKADAWAQFGHLKFIVGDEQAA 214
I NL YH A HL A E A L E I A A+ GH K+ +GD + A
Sbjct: 186 IAGNLTDVYHHEKALTHL-CSALEHAR-QLEEAYMI----AAAYYNVGHCKYSLGDYKEA 239
Query: 215 ESCFSRALNLVDD--IPEPHPVYMRLASIYLIQDKYIEAKQAF 337
E F A + ++ + L IY + KY +A +A+
Sbjct: 240 EGYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAY 282
>sp|Q86TV6|TTC7B_HUMAN Tetratricopeptide repeat protein 7B (Tetratricopeptide repeat
protein 7-like-1)
Length = 741
Score = 33.1 bits (74), Expect = 0.70
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 92 MGAYEEAEANLLETVQITFDKADAWAQFGHLKFIVGDEQAAESCFSRALNLVDDIP 259
+G Y AE L + VQ+ + W G + G++ AA CF AL L P
Sbjct: 675 LGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSP 730
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,354,820
Number of Sequences: 369166
Number of extensions: 1131859
Number of successful extensions: 2283
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5879188535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)