Planaria EST Database


DrC_01731

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01731
         (776 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P28478|V70K_TYMVC  69 kDa protein                               35   0.23 
sp|P06600|PRP33_DAUCA  Proline-rich 33 kDa extensin-related ...    34   0.39 
sp|Q06841|NO75_LUPLU  Early nodulin 75 protein (N-75) (NGM-75)     33   1.1  
sp|Q835U8|IF2_ENTFA  Translation initiation factor IF-2            33   1.1  
sp|O60885|BRD4_HUMAN  Bromodomain-containing protein 4 (HUNK...    32   1.5  
sp|Q40375|PRP2_MEDTR  Repetitive proline-rich cell wall prot...    32   1.5  
sp|Q69ZL1|FGD6_MOUSE  FYVE, RhoGEF and PH domain containing ...    32   1.5  
sp|P10233|UL49_HHV11  Tegument protein UL49                        32   1.9  
sp|O42569|SOX2_XENLA  Transcription factor SOX-2 (XLSOX-2)         32   1.9  
sp|P13993|PRP2_SOYBN  Repetitive proline-rich cell wall prot...    32   2.5  
>sp|P28478|V70K_TYMVC 69 kDa protein
          Length = 628

 Score = 35.0 bits (79), Expect = 0.23
 Identities = 37/146 (25%), Positives = 57/146 (39%), Gaps = 11/146 (7%)
 Frame = +1

Query: 1   PSSAGTINSYKPLCTPTKSHLTTNM-HQKTTPRALDQNSIVVQPTMRKQXXXXXXXXXXX 177
           P SA    S++P+  P   H+  +  H    PR     S  +QPT+R+            
Sbjct: 172 PRSATRGPSFRPILLPKVVHVHDDPPHSSLRPRG--SRSRQLQPTVRRPLLAPNQF---- 225

Query: 178 XXXXXXXXXHKPKLNAPPISQKP--VNARPMLNNGNQRNPPPPIAK--------RPINNV 327
                    H P+   PP+S  P  +  RP+  N  +  PP PI          RP++ +
Sbjct: 226 ---------HSPR-QPPPLSDDPGILGPRPLAPNSTRDPPPRPITPGPSNTHGLRPLSVL 275

Query: 328 PVPHQRKPRTENQQTHNSRRSNNEHI 405
           P    R+    N + H   R++  HI
Sbjct: 276 PRASPRRGLLPNPRRH---RTSTGHI 298
>sp|P06600|PRP33_DAUCA Proline-rich 33 kDa extensin-related protein precursor
          Length = 211

 Score = 34.3 bits (77), Expect = 0.39
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +1

Query: 205 HKPK-LNAPPISQKPVNARPMLNNGNQRNPPPPIAKRPINNVPVPHQRKP 351
           HKP+ ++ PP+ + P   +P ++     + P P+ + P    PVP  + P
Sbjct: 129 HKPQPIHRPPVHKPPTEHKPPVHEPATEHKPSPVYQPPKTEKPVPEHKPP 178

 Score = 33.5 bits (75), Expect = 0.66
 Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 19/85 (22%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNPP----------------PPIAKRPINNVPVP 336
           HKP +  PP+ + PV   P+    ++  PP                PP+ K P+      
Sbjct: 38  HKPPVYTPPVHKPPVYTPPVHKPPSEYKPPVEATNSVTEDHYPIHKPPVYKPPVQKPAPE 97

Query: 337 HQ---RKPRTENQQTHNSRRSNNEH 402
           H+    KP       HN+    ++H
Sbjct: 98  HKPPVHKPPIHKPPVHNTPSVTDDH 122

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNPPPPIAKRPINNVPV---PHQRKPRTE 360
           HKP +  PP+ + P++  P+          PP+ K P+   PV   P + KP  E
Sbjct: 23  HKPPVYTPPVHKPPIHKPPVYT--------PPVHKPPVYTPPVHKPPSEYKPPVE 69
>sp|Q06841|NO75_LUPLU Early nodulin 75 protein (N-75) (NGM-75)
          Length = 434

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +1

Query: 208 KPKLNAPPISQKPVNARPMLNNGNQRNPP--PPIAKRPINNVPVPHQRKPRTE 360
           KP +  PP  +KP    P+     +R+PP  PP  ++P    P PH++ P  E
Sbjct: 242 KPPIEYPPPHEKP----PVYEPPYERSPPVHPPSHEKPPFVYPPPHEKSPMHE 290

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP----PPPIAKRPINNVPVPHQRKP 351
           H P    PPI   P + +P ++      P    PPP  K PI   P PH++ P
Sbjct: 107 HPPPHEKPPIEYSPPHEKPPVHEPPYEKPPLVHPPPHDKPPIEYHP-PHEKPP 158

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNPPPPIAKRPINNVPVPHQRKP 351
           H P    PPI   P + +P +        PPP  K PI   P PH++ P
Sbjct: 42  HPPPHEKPPIEYPPPHTKPPIEY------PPPHVKPPI-QYPPPHEKPP 83

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNPPPPIAKRPINNVPVPHQRKP 351
           H P  + PPI   P + +P +        PPP  K PI   P PH++ P
Sbjct: 139 HPPPHDKPPIEYHPPHEKPPIEY------PPPHEKPPI-EYPPPHEKPP 180

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNPP---PPIAKRPINNVPVPHQRKP 351
           H P    PPI   P   +P ++      PP   PP   +P    P PH++ P
Sbjct: 204 HPPPDEKPPIEYPPPLEKPPVHEPPYEKPPPAQPPPHDKPPIEYPPPHEKPP 255

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNPPPPIAKRPINNVPVPHQRKP 351
           + P    PPI   P + +P +        PPP  K PI   P+PH++ P
Sbjct: 53  YPPPHTKPPIEYPPPHVKPPIQY------PPPHEKPPIE-YPLPHEKPP 94
>sp|Q835U8|IF2_ENTFA Translation initiation factor IF-2
          Length = 798

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 21/77 (27%), Positives = 33/77 (42%)
 Frame = +1

Query: 268 NNGNQRNPPPPIAKRPINNVPVPHQRKPRTENQQTHNSRRSNNEHIIQV*MIFAKQSSTY 447
           N   Q     P  K+P+NN P   +      N Q+ N ++ NN +  +       QS+T 
Sbjct: 65  NQKQQTTQNKPANKKPMNNKPGEQRNNQNRPNNQSTNGQQRNNNNQNR-----HGQSNTQ 119

Query: 448 HKSCQSYHRISTRNNHN 498
           ++S Q+      RN  N
Sbjct: 120 NRSNQTNTNNQNRNTQN 136
>sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 (HUNK1 protein)
          Length = 1362

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
 Frame = +1

Query: 211  PKLNAPPISQ-----KPVNARPMLNNGNQRNPPPPIAKRPIN-----NVPVPHQRKPRTE 360
            P+   PP  Q     +PV+ +PM  + + + PPPP  ++P +       P P   KP+  
Sbjct: 980  PQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPPPQPAKPQQV 1039

Query: 361  NQQTHNSRRSNNE 399
             Q  H+ R   ++
Sbjct: 1040 IQHHHSPRHHKSD 1052
>sp|Q40375|PRP2_MEDTR Repetitive proline-rich cell wall protein 2 precursor
          Length = 371

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PPI + PV   P+     ++ P   PP+ K PI   PV  P   KP  E
Sbjct: 225 YKPPVEKPPIYKPPVEKPPVYKPPVEKPPVYKPPVEKPPIYKPPVEKPPVYKPPVE 280

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PPI + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 255 YKPPVEKPPIYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVE 310

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 35  YKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVE 90

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 65  YKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVE 120

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 95  YKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVE 150

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 125 YKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVE 180

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 155 YKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVE 210

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 185 YKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPIYKPPVE 240

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 215 YKPPVEKPPVYKPPVEKPPIYKPPVEKPPVYKPPVEKPPVYKPPVEKPPIYKPPVE 270

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 305 YKPPVEKPPVYKPPVYKPPVYKPPVEKPPVYKPPVYKPPVEKPPVYKPPVYKPPVE 360

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV 333
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   PV
Sbjct: 285 YKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVYKPPVYKPPV 329
>sp|Q69ZL1|FGD6_MOUSE FYVE, RhoGEF and PH domain containing protein 6
          Length = 1399

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 220 NAPPISQKPVNARPMLNNGNQRNPPPPIAKRP-INNVPVPHQRK 348
           +A  + + P+  +P L   N + PPPPIA +P I +  VP   K
Sbjct: 3   SAAELKKPPLAPKPKLVGTNNKPPPPPIAPKPDIGSASVPRLTK 46
>sp|P10233|UL49_HHV11 Tegument protein UL49
          Length = 301

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +1

Query: 229 PISQKPVNARPMLNNGNQRNPPPPIAKRPINNVPVPHQRKPRTENQQT 372
           P +++PV+   +   G  R PPPP         P    R PRT+   T
Sbjct: 82  PRTRRPVSGAVLSGPGPARAPPPPAGSGGAGRTPTTAPRAPRTQRVAT 129
>sp|O42569|SOX2_XENLA Transcription factor SOX-2 (XLSOX-2)
          Length = 311

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
 Frame = +1

Query: 226 PPISQKPVNARPMLNNGNQRNPPPPIAKRPINNVPV---PHQRKPRTENQQTHNSRRS 390
           PP  Q+P        + NQ    P   KRP+N   V     +RK   EN + HNS  S
Sbjct: 11  PPAPQQPSGGNSNSASNNQNKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEIS 68
>sp|P13993|PRP2_SOYBN Repetitive proline-rich cell wall protein 2 precursor
          Length = 230

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNPP---PPIAKRPINNVPV--PHQRKPRTE 360
           +KP    PP+ + PV  +P +      NPP   PP+ K P+   PV  P   KP  E
Sbjct: 30  YKPPTEKPPVYKPPVE-KPPVYKPPVENPPIYKPPVEKPPVYKPPVEKPPVYKPPVE 85

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PPI + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 50  YKPPVENPPIYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVE 105

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 80  YKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVE 135

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 110 YKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVE 165

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 140 YKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVE 195

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV--PHQRKPRTE 360
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   PV  P   KP  E
Sbjct: 40  YKPPVEKPPVYKPPVENPPIYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVE 95

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
 Frame = +1

Query: 205 HKPKLNAPPISQKPVNARPMLNNGNQRNP--PPPIAKRPINNVPV---PHQRKPRTEN 363
           +KP +  PP+ + PV   P+     ++ P   PP+ K P+   P    P+ + P T++
Sbjct: 170 YKPPVEKPPVYKPPVEKPPVYKPPVEKPPIYKPPVEKPPVYKPPYGKPPYPKYPPTDD 227
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,497,325
Number of Sequences: 369166
Number of extensions: 1562348
Number of successful extensions: 4772
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4612
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7260540000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)