Planaria EST Database


DrC_01721

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01721
         (640 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ERG2|STRN3_MOUSE  Striatin-3 (Cell-cycle autoantigen SG...   124   3e-28
sp|P58404|STRN4_MOUSE  Striatin-4 (Zinedin)                       122   1e-27
sp|Q9NRL3|STRN4_HUMAN  Striatin-4 (Zinedin)                       120   2e-27
sp|Q13033|STRN3_HUMAN  Striatin-3 (Cell-cycle autoantigen SG...   120   2e-27
sp|O55106|STRN_MOUSE  Striatin                                    116   6e-26
sp|P70483|STRN_RAT  Striatin                                      114   2e-25
sp|O43815|STRN_HUMAN  Striatin                                    112   8e-25
sp|P58405|STRN3_RAT  Striatin-3 (Cell-cycle autoantigen SG2N...    83   5e-16
sp|Q8YV57|Y2124_ANASP  Hypothetical WD-repeat protein all2124      58   2e-08
sp|Q00808|HETE1_PODAN  Vegetatible incompatibility protein H...    53   6e-07
>sp|Q9ERG2|STRN3_MOUSE Striatin-3 (Cell-cycle autoantigen SG2NA) (S/G2 antigen)
          Length = 796

 Score =  124 bits (310), Expect = 3e-28
 Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 1/190 (0%)
 Frame = +2

Query: 29  DNYCSSFGLGDLASITVTNDAD-GENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSK 205
           D   S  GLGDLA +TVTNDAD   +L A+K                         ++ +
Sbjct: 432 DVLLSVLGLGDLADLTVTNDADYSYDLPANK-------------------------DAFR 466

Query: 206 KFWNVKYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQ 385
           K WN KYTLR HFD VR+L+F+  E  +++ S+D T+K+WN  K   +KK  ++++E + 
Sbjct: 467 KTWNPKYTLRSHFDGVRALAFHPVEPVLVTASEDHTLKLWNLQKTVPAKKSASLDVEPIY 526

Query: 386 TMRGHDGPVLSVRVLDEDLFLNSAHLASSGGLDGNLRFWTLPNLEIDPYELYDSAQNALN 565
           T R H GPVLS+ +       ++     SGG+D  +++W +P+  +DPY+ Y+S   A  
Sbjct: 527 TFRAHIGPVLSLAI------SSNGEQCFSGGIDATIQWWNMPSPNVDPYDTYESNVLAGT 580

Query: 566 ISGAHSSAIW 595
           +  AH+ A+W
Sbjct: 581 LV-AHTDAVW 589

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +2

Query: 227 TLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWN 328
           TL  H D+V  L++   ++ ++S S DGT+++WN
Sbjct: 580 TLVAHTDAVWGLAYSGIKNQLLSCSADGTIRLWN 613

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +2

Query: 224 YTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFN 334
           +++  H D+V SL+   N   ++SGS D ++++WN +
Sbjct: 716 HSMVAHLDAVTSLAVDPNGIYLMSGSHDCSIRLWNLD 752
>sp|P58404|STRN4_MOUSE Striatin-4 (Zinedin)
          Length = 760

 Score =  122 bits (305), Expect = 1e-27
 Identities = 66/181 (36%), Positives = 101/181 (55%)
 Frame = +2

Query: 53  LGDLASITVTNDADGENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSKKFWNVKYTL 232
           LGDLA +TVTND D                    L  D  DS     ++ KK WN K+TL
Sbjct: 406 LGDLADLTVTNDND--------------------LSCDLSDSK----DAFKKTWNPKFTL 441

Query: 233 RGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQTMRGHDGPV 412
           R H+D +RSL+F+ ++SA+++ S+DGT+K+WN  KA  +KK   +++E +   R H GPV
Sbjct: 442 RSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPV 501

Query: 413 LSVRVLDEDLFLNSAHLASSGGLDGNLRFWTLPNLEIDPYELYDSAQNALNISGAHSSAI 592
           L+V +       +++    SGG D  +  W +P+L +DPY+ YD +  +  + G H  A+
Sbjct: 502 LAVTM------GSNSEYCYSGGADARIHSWKIPDLNMDPYDGYDPSVLSHVLEG-HGDAV 554

Query: 593 W 595
           W
Sbjct: 555 W 555

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 218 VKYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWN 328
           + + L GH D+V  L+F      + S S DGTV++W+
Sbjct: 543 LSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWD 579

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 26/119 (21%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
 Frame = +2

Query: 2   SLALQNNEMDNYCSSFGLGDLA-------SITVTNDADGENLDASKSFCTSNPQQQISL- 157
           S+A  + E  +  +SF  GD         S  +T ++ G +  A  +   S+P Q +++ 
Sbjct: 602 SVAFTSTEPAHVVASFRSGDTVLYDLEAGSALLTLESRGSSGPAQINQVVSHPSQPLTIT 661

Query: 158 GKDKVDSSVIETNSSKKFWNVKYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFN 334
             D      ++  + K      +++  H D+V  L+   N   ++SGS D ++++W+ +
Sbjct: 662 AHDDRGIRFLDNRTGKSV----HSMVAHLDAVTCLAVDPNGVFLMSGSHDCSLRLWSLD 716
>sp|Q9NRL3|STRN4_HUMAN Striatin-4 (Zinedin)
          Length = 753

 Score =  120 bits (302), Expect = 2e-27
 Identities = 66/181 (36%), Positives = 101/181 (55%)
 Frame = +2

Query: 53  LGDLASITVTNDADGENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSKKFWNVKYTL 232
           LGDLA +TVTND D                    L  D  DS     ++ KK WN K+TL
Sbjct: 399 LGDLADLTVTNDND--------------------LSCDLSDSK----DAFKKTWNPKFTL 434

Query: 233 RGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQTMRGHDGPV 412
           R H+D +RSL+F+ ++SA+++ S+DGT+K+WN  KA  +KK   +++E +   R H GPV
Sbjct: 435 RSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPV 494

Query: 413 LSVRVLDEDLFLNSAHLASSGGLDGNLRFWTLPNLEIDPYELYDSAQNALNISGAHSSAI 592
           L+V +       +++    SGG D  +  W +P+L +DPY+ YD +  +  + G H  A+
Sbjct: 495 LAVAM------GSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEG-HGDAV 547

Query: 593 W 595
           W
Sbjct: 548 W 548

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 218 VKYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWN 328
           + + L GH D+V  L+F      + S S DGTV++W+
Sbjct: 536 LSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWD 572

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 25/119 (21%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
 Frame = +2

Query: 2   SLALQNNEMDNYCSSFGLGD-------LASITVTNDADGENLDASKSFCTSNPQQQISL- 157
           S+A  + E  +  +SF  GD       + S  +T ++ G +     +   S+P Q +++ 
Sbjct: 595 SVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPLTIT 654

Query: 158 GKDKVDSSVIETNSSKKFWNVKYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFN 334
             D      ++  + K      +++  H D+V  L+   N + ++SGS D ++++W+ +
Sbjct: 655 AHDDRGIRFLDNRTGKPV----HSMVAHLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLD 709
>sp|Q13033|STRN3_HUMAN Striatin-3 (Cell-cycle autoantigen SG2NA) (S/G2 antigen)
          Length = 797

 Score =  120 bits (302), Expect = 2e-27
 Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 1/190 (0%)
 Frame = +2

Query: 29  DNYCSSFGLGDLASITVTNDAD-GENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSK 205
           D   S  GLGDLA +TVTNDAD   +L A+K                         ++ +
Sbjct: 433 DVLLSVLGLGDLADLTVTNDADYSYDLPANK-------------------------DAFR 467

Query: 206 KFWNVKYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQ 385
           K W+ KYTLR HFD VR+L+F+  E  +++ S+D T+K+WN  K   +KK  ++++E + 
Sbjct: 468 KTWSPKYTLRSHFDGVRALAFHPVEPVLVTASEDHTLKLWNLQKTVPAKKSASLDVEPIY 527

Query: 386 TMRGHDGPVLSVRVLDEDLFLNSAHLASSGGLDGNLRFWTLPNLEIDPYELYDSAQNALN 565
           T R H GPVLS+ +       ++     SGG+D  +++W +P+  +DPY+ Y+    A  
Sbjct: 528 TFRAHIGPVLSLAI------SSNGEQCFSGGIDATIQWWNMPSPSVDPYDTYEPNVLAGT 581

Query: 566 ISGAHSSAIW 595
           + G H+ A+W
Sbjct: 582 LVG-HTDAVW 590

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +2

Query: 227 TLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWN 328
           TL GH D+V  L++   ++ ++S S DGTV++WN
Sbjct: 581 TLVGHTDAVWGLAYSGIKNQLLSCSADGTVRLWN 614

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 21/84 (25%), Positives = 39/84 (46%)
 Frame = +2

Query: 224 YTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQTMRGHD 403
           +++  H D+V SL+   N   ++SGS D ++++WN +               VQ +  H 
Sbjct: 717 HSMVAHLDAVTSLAVDPNGIYLMSGSHDCSIRLWNLDSK-----------TCVQEITAH- 764

Query: 404 GPVLSVRVLDEDLFLNSAHLASSG 475
              L   + D     + A++AS+G
Sbjct: 765 RKKLDESIYDVAFHSSKAYIASAG 788
>sp|O55106|STRN_MOUSE Striatin
          Length = 780

 Score =  116 bits (290), Expect = 6e-26
 Identities = 64/185 (34%), Positives = 98/185 (52%)
 Frame = +2

Query: 41  SSFGLGDLASITVTNDADGENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSKKFWNV 220
           S  GLG+LA +TV N+AD    D             I+  KD +          +K WN 
Sbjct: 419 SELGLGELAGLTVANEADSLAYD-------------IANNKDAL----------RKTWNP 455

Query: 221 KYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQTMRGH 400
           K+TLR HFD +R+L+F+  E  +I+ S+D T+K+WN  K   +KK  ++++E + T R H
Sbjct: 456 KFTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAH 515

Query: 401 DGPVLSVRVLDEDLFLNSAHLASSGGLDGNLRFWTLPNLEIDPYELYDSAQNALNISGAH 580
            GPVL V      +  ++     SGG DG ++ W+  N  +DPY+ YD +     + G H
Sbjct: 516 KGPVLCV------VMSSNGEQCYSGGTDGRIQSWSTTNPNVDPYDAYDPSVLRGPLLG-H 568

Query: 581 SSAIW 595
           + A+W
Sbjct: 569 TDAVW 573

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
 Frame = +2

Query: 128 TSNPQQQISLGKDKVDSSVIETNSSKKFWN------VKYTLRGHFDSVRSLSFYKNESAI 289
           +SN +Q  S G D    S   TN +   ++      ++  L GH D+V  L++      +
Sbjct: 525 SSNGEQCYSGGTDGRIQSWSTTNPNVDPYDAYDPSVLRGPLLGHTDAVWGLAYSAAHQRL 584

Query: 290 ISGSDDGTVKVWN 328
           +S S DGT+++WN
Sbjct: 585 LSCSADGTLRLWN 597
>sp|P70483|STRN_RAT Striatin
          Length = 780

 Score =  114 bits (286), Expect = 2e-25
 Identities = 64/185 (34%), Positives = 98/185 (52%)
 Frame = +2

Query: 41  SSFGLGDLASITVTNDADGENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSKKFWNV 220
           S  GLG+LA +TV N+AD    D             I+  KD +          +K WN 
Sbjct: 419 SELGLGELAGLTVANEADSLAYD-------------IANNKDAL----------RKTWNP 455

Query: 221 KYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQTMRGH 400
           K+TLR HFD +R+L+F+  E  +I+ S+D T+K+WN  K   +KK  ++++E + T R H
Sbjct: 456 KFTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAH 515

Query: 401 DGPVLSVRVLDEDLFLNSAHLASSGGLDGNLRFWTLPNLEIDPYELYDSAQNALNISGAH 580
            GPVL V      +  ++     SGG DG ++ W+  N  +DPY+ YD +     + G H
Sbjct: 516 KGPVLCV------VMSSNGEQCYSGGTDGLIQSWSTTNPNVDPYDSYDPSVLRGPLLG-H 568

Query: 581 SSAIW 595
           + A+W
Sbjct: 569 TDAVW 573

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
 Frame = +2

Query: 128 TSNPQQQISLGKDKVDSSVIETNSSKKFWN------VKYTLRGHFDSVRSLSFYKNESAI 289
           +SN +Q  S G D +  S   TN +   ++      ++  L GH D+V  L++      +
Sbjct: 525 SSNGEQCYSGGTDGLIQSWSTTNPNVDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRL 584

Query: 290 ISGSDDGTVKVW 325
           +S S DGT+++W
Sbjct: 585 LSCSADGTLRLW 596
>sp|O43815|STRN_HUMAN Striatin
          Length = 780

 Score =  112 bits (280), Expect = 8e-25
 Identities = 64/185 (34%), Positives = 96/185 (51%)
 Frame = +2

Query: 41  SSFGLGDLASITVTNDADGENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSKKFWNV 220
           S  G G+LA +TV N+AD    D             I+  KD +          +K WN 
Sbjct: 419 SELGPGELAGLTVANEADSLTYD-------------IANNKDAL----------RKTWNP 455

Query: 221 KYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQTMRGH 400
           K+TLR HFD +R+L+F+  E  +I+ S+D T+K+WN  K   +KK  ++++E + T R H
Sbjct: 456 KFTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAH 515

Query: 401 DGPVLSVRVLDEDLFLNSAHLASSGGLDGNLRFWTLPNLEIDPYELYDSAQNALNISGAH 580
            GPVL V      +  ++     SGG DG ++ W   N  IDPY+ YD +     + G H
Sbjct: 516 KGPVLCV------VMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLG-H 568

Query: 581 SSAIW 595
           + A+W
Sbjct: 569 TDAVW 573

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 230 LRGHFDSVRSLSFYKNESAIISGSDDGTVKVWN 328
           L GH D+V  L++      ++S S DGT+++WN
Sbjct: 565 LLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWN 597
>sp|P58405|STRN3_RAT Striatin-3 (Cell-cycle autoantigen SG2NA) (S/G2 antigen)
          Length = 461

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
 Frame = +2

Query: 29  DNYCSSFGLGDLASITVTNDAD-GENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSK 205
           D   S  GLGDLA +TVTNDA    +L A+K                         ++ +
Sbjct: 362 DVLLSVLGLGDLADLTVTNDAXYSYDLPANK-------------------------DALR 396

Query: 206 KFWNVKYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQ 385
           K WN KYTLR HFD VR+L+F+  E  +++ S+D T+K+WN  K   +KK  ++++E + 
Sbjct: 397 KTWNPKYTLRSHFDGVRALAFHPVEPVLVTASEDHTLKLWNLQKTVPAKKSASLDVEPIY 456

Query: 386 TMRGH 400
           T R H
Sbjct: 457 TFRAH 461
>sp|Q8YV57|Y2124_ANASP Hypothetical WD-repeat protein all2124
          Length = 1683

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 5/153 (3%)
 Frame = +2

Query: 149  ISLGKDKVDSSVIETNSSKKFWNVK-----YTLRGHFDSVRSLSFYKNESAIISGSDDGT 313
            +S   D    +    + + K W +       TL+GH DSV  ++F  +  AI S S D T
Sbjct: 1245 LSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNT 1304

Query: 314  VKVWNFNKAQLSKKGPNMEIEAVQTMRGHDGPVLSVRVLDEDLFLNSAHLASSGGLDGNL 493
            +K+WN +  +L            +T  GH G V +V       FL  +++ +S  LD  +
Sbjct: 1305 IKLWNRHGIEL------------ETFTGHSGGVYAVN------FLPDSNIIASASLDNTI 1346

Query: 494  RFWTLPNLEIDPYELYDSAQNALNISGAHSSAI 592
            R W  P   I P E+         +S  H  +I
Sbjct: 1347 RLWQRP--LISPLEVLAGNSGVYAVSFLHDGSI 1377

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 4/188 (2%)
 Frame = +2

Query: 62   LASITVTNDADGENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSKKFWN----VKYT 229
            LA++T    A  E  + ++     +    IS+ +D    +    + + K W+    +  T
Sbjct: 1049 LATVTTLQQALFEMQERNRLEGHKDGVISISISRDGQTIASGSLDKTIKLWSRDGRLFRT 1108

Query: 230  LRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQTMRGHDGP 409
            L GH D+V S+SF  +   I SG  D T+K+W  +   L K           T+ GH+  
Sbjct: 1109 LNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLK-----------TITGHEQT 1157

Query: 410  VLSVRVLDEDLFLNSAHLASSGGLDGNLRFWTLPNLEIDPYELYDSAQNALNISGAHSSA 589
            V +V       F       +S   D +++ W              S Q  + ++G HS+ 
Sbjct: 1158 VNNV------YFSPDGKNLASASSDHSIKLWDT-----------TSGQLLMTLTG-HSAG 1199

Query: 590  IWTVDCLP 613
            + TV   P
Sbjct: 1200 VITVRFSP 1207

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
 Frame = +2

Query: 134  NPQQQISLGKDKVDSSVIETNSSKKFWNV-----KYTLRGHFDSVRSLSFYKNESAIISG 298
            N   +++   D    +    +++ K WNV     K TL+GH D V  +SF  +   I S 
Sbjct: 1447 NEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASA 1506

Query: 299  SDDGTVKVWNFNKAQLSKKGPNMEIEAVQTMRGHDGPVLSVRVLDEDLFLNSAH 460
            S D T+++W+     L K  P             DG +L+    D+ + L  +H
Sbjct: 1507 SADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSH 1560

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 7/114 (6%)
 Frame = +2

Query: 182  VIETNSSK--KFWNVK-----YTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKA 340
            +   N+ K  K W V+      TL GH + V  ++F  +   + S S D TVK+WN +  
Sbjct: 1419 IASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDG 1478

Query: 341  QLSKKGPNMEIEAVQTMRGHDGPVLSVRVLDEDLFLNSAHLASSGGLDGNLRFW 502
            +  K           T++GH   V  V       F     + +S   D  +R W
Sbjct: 1479 KFKK-----------TLKGHTDEVFWVS------FSPDGKIIASASADKTIRLW 1515

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 39/188 (20%), Positives = 69/188 (36%), Gaps = 36/188 (19%)
 Frame = +2

Query: 158  GKDKVDSSVIETNSSKKFWNVK-----YTLRGHFDSVRSLSFYKNESAIISGSDDGTVKV 322
            GK+   +S   ++ S K W+        TL GH   V ++ F  +   I +GS+D TVK+
Sbjct: 1167 GKNLASAS---SDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKL 1223

Query: 323  WN----------------FNKAQLSKKGPNM---------------EIEAVQTMRGHDGP 409
            W+                 N    S  G  +               + + V+T++GH+  
Sbjct: 1224 WHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDS 1283

Query: 410  VLSVRVLDEDLFLNSAHLASSGGLDGNLRFWTLPNLEIDPYELYDSAQNALNISGAHSSA 589
            V  V       F +     +S   D  ++ W    +E++ +               HS  
Sbjct: 1284 VWDVN------FSSDGKAIASASRDNTIKLWNRHGIELETFT-------------GHSGG 1324

Query: 590  IWTVDCLP 613
            ++ V+ LP
Sbjct: 1325 VYAVNFLP 1332

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
 Frame = +2

Query: 173  DSSVIETNSSKK---FW-----NVKYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWN 328
            D S++ + S+ K    W     ++ +T  GH + V S SF  +   I S S+D TVK+W 
Sbjct: 1541 DGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQ 1600

Query: 329  FNKAQLSKKGPNMEIEAVQTMRGHDGPVLSVRVLDEDLFLNSAHLASSGGLDGNLRFWTL 508
             +   L+            T+  H   V+S       +F        SG LD   + W  
Sbjct: 1601 IDGHLLT------------TLPQHQAGVMSA------IFSPDGKTLISGSLDTTTKIWRF 1642

Query: 509  PNLEIDPYELYDSAQNALN 565
             + +    ++     +A N
Sbjct: 1643 DSQQAKTSQMNTLVMSACN 1661

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 13/157 (8%)
 Frame = +2

Query: 173  DSSVIETNSSKK---FW-----NVKYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWN 328
            D  +I + S+ K    W     N+  +L  H D V S++F  + S + S S D TVK+W 
Sbjct: 1499 DGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWR 1558

Query: 329  FNKAQLSKKGPNMEIEAVQTMRGHDGPVLSVRVLDEDLFLNSA---HLASSGGLDGNLRF 499
             +   L           + T  GH   V S     +  ++ SA          +DG+L  
Sbjct: 1559 SHDGHL-----------LHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDGHL-L 1606

Query: 500  WTLPNLEIDPYELYDSAQNALNISGA--HSSAIWTVD 604
             TLP  +        S      ISG+   ++ IW  D
Sbjct: 1607 TTLPQHQAGVMSAIFSPDGKTLISGSLDTTTKIWRFD 1643

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 23/94 (24%), Positives = 37/94 (39%)
 Frame = +2

Query: 227  TLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQTMRGHDG 406
            TL G+  ++  +SF      I S + D TVK+W                +A++T+ GHD 
Sbjct: 1400 TLPGN-KAIYGISFTPQGDLIASANADKTVKIWRVRDG-----------KALKTLIGHDN 1447

Query: 407  PVLSVRVLDEDLFLNSAHLASSGGLDGNLRFWTL 508
             V  V       F       +S   D  ++ W +
Sbjct: 1448 EVNKVN------FSPDGKTLASASRDNTVKLWNV 1475
>sp|Q00808|HETE1_PODAN Vegetatible incompatibility protein HET-E-1
          Length = 1356

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 43/148 (29%), Positives = 62/148 (41%)
 Frame = +2

Query: 59   DLASITVTNDADGENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSKKFWNVKYTLRG 238
            D AS T T   +G      +S   S   Q+++ G D     + +  S         TL G
Sbjct: 1037 DTASGTCTQTLEGHG-GWVQSVVFSPDGQRVASGSDDHTIKIWDAVSG----TCTQTLEG 1091

Query: 239  HFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQTMRGHDGPVLS 418
            H DSV S++F  +   + SGS DGT+K+W+                  QT+ GH G V S
Sbjct: 1092 HGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASG-----------TCTQTLEGHGGWVHS 1140

Query: 419  VRVLDEDLFLNSAHLASSGGLDGNLRFW 502
            V       F       +SG +DG ++ W
Sbjct: 1141 V------AFSPDGQRVASGSIDGTIKIW 1162

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 41/148 (27%), Positives = 60/148 (40%)
 Frame = +2

Query: 59   DLASITVTNDADGENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSKKFWNVKYTLRG 238
            D AS T T   +G    +  S   S   Q+++ G       + +T S         TL G
Sbjct: 953  DAASGTCTQTLEGHG-SSVLSVAFSPDGQRVASGSGDKTIKIWDTASG----TCTQTLEG 1007

Query: 239  HFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQTMRGHDGPVLS 418
            H  SV S++F  +   + SGSDD T+K+W+                  QT+ GH G V S
Sbjct: 1008 HGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASG-----------TCTQTLEGHGGWVQS 1056

Query: 419  VRVLDEDLFLNSAHLASSGGLDGNLRFW 502
            V      +F       +SG  D  ++ W
Sbjct: 1057 V------VFSPDGQRVASGSDDHTIKIW 1078

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
 Frame = +2

Query: 212  WNV-KYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQT 388
            WN    TL GH  SV S++F  +   + SGSDD T+K+W+                  QT
Sbjct: 830  WNACTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASG-----------TGTQT 878

Query: 389  MRGHDGPVLSVRVLDEDLFLNSAHLASSGGLDGNLRFW 502
            + GH G V SV       F       +SG  D  ++ W
Sbjct: 879  LEGHGGSVWSV------AFSPDRERVASGSDDKTIKIW 910

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 34/120 (28%), Positives = 50/120 (41%)
 Frame = +2

Query: 143  QQISLGKDKVDSSVIETNSSKKFWNVKYTLRGHFDSVRSLSFYKNESAIISGSDDGTVKV 322
            Q+++ G D     + +T S         TL GH  SV S++F  +   + SGSDD T+K+
Sbjct: 854  QRVASGSDDKTIKIWDTASGTG----TQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKI 909

Query: 323  WNFNKAQLSKKGPNMEIEAVQTMRGHDGPVLSVRVLDEDLFLNSAHLASSGGLDGNLRFW 502
            W+                  QT+ GH G V SV       F       +SG  D  ++ W
Sbjct: 910  WDAASG-----------TCTQTLEGHGGRVQSV------AFSPDGQRVASGSDDHTIKIW 952

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 39/148 (26%), Positives = 60/148 (40%)
 Frame = +2

Query: 59   DLASITVTNDADGENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSKKFWNVKYTLRG 238
            D AS T T   +G    +  S   S  +++++ G D     + +  S         TL G
Sbjct: 869  DTASGTGTQTLEGHG-GSVWSVAFSPDRERVASGSDDKTIKIWDAASG----TCTQTLEG 923

Query: 239  HFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQTMRGHDGPVLS 418
            H   V+S++F  +   + SGSDD T+K+W+                  QT+ GH   VLS
Sbjct: 924  HGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASG-----------TCTQTLEGHGSSVLS 972

Query: 419  VRVLDEDLFLNSAHLASSGGLDGNLRFW 502
            V       F       +SG  D  ++ W
Sbjct: 973  V------AFSPDGQRVASGSGDKTIKIW 994

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 5/153 (3%)
 Frame = +2

Query: 59   DLASITVTNDADGENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSKKFWNVK----- 223
            D  S T T   +G   D+  S   S   Q+++ G   +D ++       K W+       
Sbjct: 1079 DAVSGTCTQTLEGHG-DSVWSVAFSPDGQRVASGS--IDGTI-------KIWDAASGTCT 1128

Query: 224  YTLRGHFDSVRSLSFYKNESAIISGSDDGTVKVWNFNKAQLSKKGPNMEIEAVQTMRGHD 403
             TL GH   V S++F  +   + SGS DGT+K+W+                  QT+ GH 
Sbjct: 1129 QTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASG-----------TCTQTLEGHG 1177

Query: 404  GPVLSVRVLDEDLFLNSAHLASSGGLDGNLRFW 502
            G V SV       F       +SG  D  ++ W
Sbjct: 1178 GWVQSV------AFSPDGQRVASGSSDKTIKIW 1204

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 26/90 (28%), Positives = 41/90 (45%)
 Frame = +2

Query: 59   DLASITVTNDADGENLDASKSFCTSNPQQQISLGKDKVDSSVIETNSSKKFWNVKYTLRG 238
            D AS T T   +G      +S   S   Q+++ G       + +T S         TL G
Sbjct: 1163 DAASGTCTQTLEGHG-GWVQSVAFSPDGQRVASGSSDKTIKIWDTASG----TCTQTLEG 1217

Query: 239  HFDSVRSLSFYKNESAIISGSDDGTVKVWN 328
            H   V+S++F  +   + SGS D T+K+W+
Sbjct: 1218 HGGWVQSVAFSPDGQRVASGSSDNTIKIWD 1247
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,258,006
Number of Sequences: 369166
Number of extensions: 1247618
Number of successful extensions: 5216
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4975
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5169945420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)