Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_01710
(737 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P10515|ODP2_HUMAN Dihydrolipoyllysine-residue acetyltran... 167 4e-41
sp|P08461|ODP2_RAT Dihydrolipoyllysine-residue acetyltransf... 161 1e-39
sp|O59816|ODP2_SCHPO Dihydrolipoyllysine-residue acetyltran... 138 2e-32
sp|P36413|ODP2_DICDI Dihydrolipoyllysine-residue acetyltran... 131 2e-30
sp|P12695|ODP2_YEAST Dihydrolipoyllysine-residue acetyltran... 125 2e-28
sp|Q9ZD20|ODP2_RICPR Dihydrolipoyllysine-residue acetyltran... 117 3e-26
sp|Q92HK7|ODP2_RICCN Dihydrolipoyllysine-residue acetyltran... 114 2e-25
sp|Q9R9N3|ODP2_RHIME Dihydrolipoyllysine-residue acetyltran... 113 5e-25
sp|O66119|ODP2_ZYMMO Dihydrolipoyllysine-residue acetyltran... 112 1e-24
sp|O00330|ODPX_HUMAN Pyruvate dehydrogenase protein X compo... 80 4e-15
>sp|P10515|ODP2_HUMAN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial precursor (Pyruvate
dehydrogenase complex E2 subunit) (PDCE2) (E2)
(Dihydrolipoamide S-acetyltransferase component of
pyruvate dehydrogenase complex) (PDC-E2) (70 kDa
mitochondrial autoantigen of primary biliary cirrhosis)
(PBC) (M2 antigen complex 70 kDa subunit)
Length = 614
Score = 167 bits (422), Expect = 4e-41
Identities = 100/253 (39%), Positives = 135/253 (53%), Gaps = 18/253 (7%)
Frame = +1
Query: 1 METGSVLSWGRKEGEAVSEGDLLAEIETDKATMSMDASDTGIMAKILVAAGTKDVPIGTP 180
M G+V W +K GE +SEGDLLAEIETDKAT+ + + G +AKILV GT+DVP+GTP
Sbjct: 197 MTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTP 256
Query: 181 LCVIVENEADVAAFKEFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
LC+IVE EAD++AF ++
Sbjct: 257 LCIIVEKEADISAFADY-------RPTEVTDLKPQVPPPTPPPVAAVPPTPQPLAPTPST 309
Query: 361 TCPADQ-----RLFVSPYARTLAAERNIDLASAGIVGSGPDGRIRARDLDQ--------- 498
CPA R+FV P A+ LA E+ IDL + G+GPDGRI +D+D
Sbjct: 310 PCPATPAGPKGRVFVDPLAKKLAVEKGIDLTQ--VKGTGPDGRITKKDIDSFVPSKVAPA 367
Query: 499 ----VGTGVRGQVCSSTASYTDLELSNMRKVIAQRLWLSKQTIPHYYLTMEVRMDRVIEM 666
V G T +TD+ +SN+R+VIAQRL SKQTIPHYYL+++V M V+ +
Sbjct: 368 PAAVVPPTGPGMAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLV 427
Query: 667 RHKINKKLQSEDR 705
R ++NK L+ +
Sbjct: 428 RKELNKILEGRSK 440
Score = 89.7 bits (221), Expect = 7e-18
Identities = 39/78 (50%), Positives = 57/78 (73%)
Frame = +1
Query: 1 METGSVLSWGRKEGEAVSEGDLLAEIETDKATMSMDASDTGIMAKILVAAGTKDVPIGTP 180
M+ G++ W +KEG+ ++EGDL+AE+ETDKAT+ ++ + MAKILVA GT+DVPIG
Sbjct: 70 MQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGAI 129
Query: 181 LCVIVENEADVAAFKEFT 234
+C+ V D+ AFK +T
Sbjct: 130 ICITVGKPEDIEAFKNYT 147
>sp|P08461|ODP2_RAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex (E2) (Dihydrolipoamide
acetyltransferase component of pyruvate dehydrogenase
complex) (PDC-E2) (70 kDa mitochondrial autoantigen of
primary biliary cirrhosis) (PBC)
Length = 555
Score = 161 bits (408), Expect = 1e-39
Identities = 96/249 (38%), Positives = 135/249 (54%), Gaps = 14/249 (5%)
Frame = +1
Query: 1 METGSVLSWGRKEGEAVSEGDLLAEIETDKATMSMDASDTGIMAKILVAAGTKDVPIGTP 180
M G+V W +K GE +SEGDLLAEIETDKAT+ + + G +AKILV GT+DVP+GTP
Sbjct: 143 MTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTP 202
Query: 181 LCVIVENEADVAAFKEFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
LC+IVE + D+AAF ++
Sbjct: 203 LCIIVEKQEDIAAFADY--------RPTEVTSLKPQAPPPVPPPVAAVPPIPQPLAPTPS 254
Query: 361 TCPADQ--RLFVSPYARTLAAERNIDLASAGIVGSGPDGRIRARDLDQVGTGVRGQVCSS 534
PA R+FVSP A+ LAAE+ IDL + G+GP+GRI +D+D ++
Sbjct: 255 AAPAGPKGRVFVSPLAKKLAAEKGIDLTQ--VKGTGPEGRIIKKDIDSFVPTKAAPAAAA 312
Query: 535 TAS------------YTDLELSNMRKVIAQRLWLSKQTIPHYYLTMEVRMDRVIEMRHKI 678
A + D+ +SN+R+VIAQRL SKQTIPHYYL+++V M V+ +R ++
Sbjct: 313 AAPPGPRVAPTPAGVFIDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKEL 372
Query: 679 NKKLQSEDR 705
NK L+ + +
Sbjct: 373 NKMLEGKGK 381
Score = 92.4 bits (228), Expect = 1e-18
Identities = 41/78 (52%), Positives = 57/78 (73%)
Frame = +1
Query: 1 METGSVLSWGRKEGEAVSEGDLLAEIETDKATMSMDASDTGIMAKILVAAGTKDVPIGTP 180
M+ G++ W +KEGE +SEGDL+AE+ETDKAT+ ++ + MAKILV GT+DVPIG
Sbjct: 17 MQAGTIARWEKKEGEKISEGDLIAEVETDKATVGFESLEECYMAKILVPEGTRDVPIGCI 76
Query: 181 LCVIVENEADVAAFKEFT 234
+C+ VE D+ AFK +T
Sbjct: 77 ICITVEKPQDIEAFKNYT 94
>sp|O59816|ODP2_SCHPO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial precursor (E2)
(Dihydrolipoamide acetyltransferase component of
pyruvate dehydrogenase complex) (PDC-E2)
Length = 483
Score = 138 bits (347), Expect = 2e-32
Identities = 88/244 (36%), Positives = 121/244 (49%), Gaps = 17/244 (6%)
Frame = +1
Query: 1 METGSVLSWGRKEGEAVSEGDLLAEIETDKATMSMDASDTGIMAKILVAAGTKDVPIGTP 180
M TG++ ++ +K G+ + GD+L EIETDKA + + D G +AKIL+ GTKDVP+G P
Sbjct: 65 MTTGNIGAFQKKIGDKIEPGDVLCEIETDKAQIDFEQQDEGYLAKILIETGTKDVPVGKP 124
Query: 181 LCVIVENEADVAAFKEFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
L V VENE DVAA +FT
Sbjct: 125 LAVTVENEGDVAAMADFTIEDSSAKEPSAKSGEEKSAPSSEKQSKETSSPSNVSGE---- 180
Query: 361 TCPADQRLFVSPYARTLAAERNIDLASAGIVGSGPDGRIRARDLDQVGTGVRGQVCSSTA 540
R+F SP AR LA E+++DL+ I GSGP+GRI D++ V + + A
Sbjct: 181 --ERGDRVFASPLARKLAEEKDLDLSQ--IRGSGPNGRIIKVDIENFKPVVAPKPSNEAA 236
Query: 541 S-----------------YTDLELSNMRKVIAQRLWLSKQTIPHYYLTMEVRMDRVIEMR 669
+ Y DL LSNMRK+IA RL SK PHYY+T+ V M+++I +R
Sbjct: 237 AKATTPAASAADAAAPGDYEDLPLSNMRKIIASRLAESKNMNPHYYVTVSVNMEKIIRLR 296
Query: 670 HKIN 681
+N
Sbjct: 297 AALN 300
>sp|P36413|ODP2_DICDI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial precursor (E2)
(Dihydrolipoamide acetyltransferase component of
pyruvate dehydrogenase complex) (PDC-E2)
Length = 592
Score = 131 bits (330), Expect = 2e-30
Identities = 82/244 (33%), Positives = 122/244 (50%), Gaps = 17/244 (6%)
Frame = +1
Query: 1 METGSVLSWGRKEGEAVSEGDLLAEIETDKATMSMDASD-TGIMAKILVAAGTKDVPIGT 177
METG + SW +KEG+ + GD +AE+ETDKATM D G +AKILV GT + I
Sbjct: 175 METGGIASWTKKEGDQIKAGDAIAEVETDKATMDFQYEDGNGYLAKILVPGGTSGIQINQ 234
Query: 178 PLCVIVENEADVAAFKEFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 357
P+C+IV+N+ D F +++
Sbjct: 235 PVCIIVKNKEDCDKFADYS-----VEEQSSSSSSSSQESTPSSSSSSSQESTPSQSSSQQ 289
Query: 358 XTCPADQRLFVSPYARTLAAERNIDLASAGIVGSGPDGRIRARDL--------------- 492
T + +R+F +P AR A+ + DL++ I G+GP+ RI D+
Sbjct: 290 TTRKSGERIFATPAARFEASSKGYDLSA--INGTGPNNRILKADVLEFVPQKQEVAQQQQ 347
Query: 493 -DQVGTGVRGQVCSSTASYTDLELSNMRKVIAQRLWLSKQTIPHYYLTMEVRMDRVIEMR 669
T + +S+ +TD+ SN+RKV A RL SKQTIPHYYLTME R+D+++++R
Sbjct: 348 QQTTTTTKKPTTPTSSGEFTDIPHSNIRKVTAARLTESKQTIPHYYLTMECRVDKLLKLR 407
Query: 670 HKIN 681
++N
Sbjct: 408 SELN 411
Score = 70.1 bits (170), Expect = 6e-12
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +1
Query: 1 METGSVLSWGRKEGEAVSEGDLLAEIETDKATMSMDASDTGIMAKILVAAGTKDVPIGTP 180
M G+++ W +KEG+ + GD++ E+ETDKATM G +AKIL+ GTK + I P
Sbjct: 53 MTVGNIVQWKKKEGDQIKAGDVIREVETDKATMDSYEDGNGYLAKILIPEGTKGIEINKP 112
Query: 181 LCVIVENEADV 213
+ +IV + D+
Sbjct: 113 IAIIVSKKEDI 123
>sp|P12695|ODP2_YEAST Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial precursor (E2)
(Dihydrolipoamide acetyltransferase component of
pyruvate dehydrogenase complex) (PDC-E2)
Length = 482
Score = 125 bits (313), Expect = 2e-28
Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Frame = +1
Query: 1 METGSVLSWGRKEGEAVSEGDLLAEIETDKATMSMDASDTGIMAKILVAAGTKDVPIGTP 180
M G++ +W +KEG+ +S G+++AEIETDKA M + + G +AKILV GTKD+P+ P
Sbjct: 46 MTQGNLAAWTKKEGDQLSPGEVIAEIETDKAQMDFEFQEDGYLAKILVPEGTKDIPVNKP 105
Query: 181 LCVIVENEADVAAFKEFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
+ V VE++ADV AFK+F
Sbjct: 106 IAVYVEDKADVPAFKDFKLEDSGSDSKTSTKAQPAEPQAEKKQEAPAEETKTSAPEAKKS 165
Query: 361 TCPADQ-RLFVSPYARTLAAERNIDLASAGIVGSGPDGRIRARDLDQV------------ 501
A Q R+F SP A+T+A E+ I L + G+GP GRI D++
Sbjct: 166 DVAAPQGRIFASPLAKTIALEKGISLKD--VHGTGPRGRITKADIESYLEKSSKQSSQTS 223
Query: 502 -------------GTGVRGQVCSSTASYTDLELSNMRKVIAQRLWLSKQTIPHYYLTMEV 642
T SSTASY D+ +S MR +I +RL S Q IP Y ++ ++
Sbjct: 224 GAAAATPAAATSSTTAGSAPSPSSTASYEDVPISTMRSIIGERLLQSTQGIPSYIVSSKI 283
Query: 643 RMDRVIEMRHKIN 681
+ +++++R +N
Sbjct: 284 SISKLLKLRQSLN 296
>sp|Q9ZD20|ODP2_RICPR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex (E2) (Dihydrolipoamide
acetyltransferase component of pyruvate dehydrogenase
complex)
Length = 408
Score = 117 bits (293), Expect = 3e-26
Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 2/237 (0%)
Frame = +1
Query: 1 METGSVLSWGRKEGEAVSEGDLLAEIETDKATMSMDASDTGIMAKILVAAGTKDVPIGTP 180
M G++ W +KEG+ V+ G+++AEIETDKATM +++ D GI+AKI++ +++VP+ +
Sbjct: 14 MREGNLARWLKKEGDKVNPGEVIAEIETDKATMEVESVDEGILAKIIIPQNSQNVPVNSL 73
Query: 181 LCVIVENEADVAAFKEFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
+ V+ E D A F
Sbjct: 74 IAVLSEEGEDKADIDSFIAQNNSVSLSLKTDATLKKSNDSITNVEGIKHD---------- 123
Query: 361 TCPADQRLFVSPYARTLAAERNIDLASAGIVGSGPDGRIRARDLDQVGTGVRGQ--VCSS 534
++F SP A+ LA +I L + + GSGP GRI +D+ + V
Sbjct: 124 ----SNKIFASPLAKRLAKIGDIRLEN--VQGSGPHGRIVKQDILSYDSSTSSNKIVYRD 177
Query: 535 TASYTDLELSNMRKVIAQRLWLSKQTIPHYYLTMEVRMDRVIEMRHKINKKLQSEDR 705
T Y + +N+RK+IA+RL SKQT+PH+YL++E +D+++++R INK SED+
Sbjct: 178 TEEYRSVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDVREDINKSF-SEDK 233
>sp|Q92HK7|ODP2_RICCN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex (E2) (Dihydrolipoamide
acetyltransferase component of pyruvate dehydrogenase
complex)
Length = 412
Score = 114 bits (286), Expect = 2e-25
Identities = 76/237 (32%), Positives = 119/237 (50%), Gaps = 2/237 (0%)
Frame = +1
Query: 1 METGSVLSWGRKEGEAVSEGDLLAEIETDKATMSMDASDTGIMAKILVAAGTKDVPIGTP 180
M G++ W +KEG+ V+ G+++AEIETDKATM ++A D GI+AKI++ +++VP+ +
Sbjct: 14 MTEGNLARWLKKEGDKVNPGEVIAEIETDKATMEVEAVDEGILAKIVIPQNSQNVPVNSL 73
Query: 181 LCVIVENEADVAAFKEFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
+ V+ E + F
Sbjct: 74 IAVLSEEGEEKTDIDAFIAKNNSVSPSPKTDANLPKPHENIANVEEQVTVIKHDV----- 128
Query: 361 TCPADQRLFVSPYARTLAAERNIDLASAGIVGSGPDGRIRARDLDQV--GTGVRGQVCSS 534
R+F SP A+ LA RNI S + GSGP GRI +D+ T V +
Sbjct: 129 -----SRIFASPLAKRLAKMRNIRFES--VKGSGPHGRIVKQDILSYTPSTAHNKIVSRN 181
Query: 535 TASYTDLELSNMRKVIAQRLWLSKQTIPHYYLTMEVRMDRVIEMRHKINKKLQSEDR 705
Y + +N+RK+IA+RL SKQT+PH+YL++E +D+++++R IN K SED+
Sbjct: 182 PEEYRLVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDIREDIN-KFFSEDK 237
>sp|Q9R9N3|ODP2_RHIME Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex (E2) (Dihydrolipoamide
acetyltransferase component of pyruvate dehydrogenase
complex)
Length = 447
Score = 113 bits (283), Expect = 5e-25
Identities = 81/261 (31%), Positives = 120/261 (45%), Gaps = 27/261 (10%)
Frame = +1
Query: 1 METGSVLSWGRKEGEAVSEGDLLAEIETDKATMSMDASDTGIMAKILVAAGTKDVPIGTP 180
ME G++ W KEG+ V GD++AEIETDKATM ++A D G +AKI+V AGT+ V +
Sbjct: 14 MEEGNLAKWLVKEGDKVKSGDVIAEIETDKATMEVEAVDEGTVAKIVVPAGTEGVKVNAL 73
Query: 181 LCVIVENEADVAAFKEFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
+ V+ DVA +
Sbjct: 74 IAVLAAEGEDVATAAK---GGNGAAGAVPAPKPKETAETAPAAAPAPAAAPAPQAAAPAS 130
Query: 361 TCPAD---QRLFVSPYARTLAAERNIDLASAGIVGSGPDGRIRARDLDQVGTGVRGQVCS 531
PAD +R+F SP AR LA E IDL++ I GSGP GR+ +D++ +G +
Sbjct: 131 PAPADGEGKRIFSSPLARRLAKEAGIDLSA--IAGSGPHGRVVKKDVETAVSGGAAKPAG 188
Query: 532 STA------------------------SYTDLELSNMRKVIAQRLWLSKQTIPHYYLTME 639
+ A SY + MRK IA+RL SKQTIPH+Y++++
Sbjct: 189 APAAAPAPATLAKGMSEDAVLKLFEPGSYELVPHDGMRKTIAKRLVESKQTIPHFYVSVD 248
Query: 640 VRMDRVIEMRHKINKKLQSED 702
+D ++ +R ++N +D
Sbjct: 249 CELDALMALRAQLNAAAPEKD 269
>sp|O66119|ODP2_ZYMMO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex (E2) (Dihydrolipoamide
acetyltransferase component of pyruvate dehydrogenase
complex)
Length = 440
Score = 112 bits (279), Expect = 1e-24
Identities = 79/250 (31%), Positives = 118/250 (47%), Gaps = 20/250 (8%)
Frame = +1
Query: 1 METGSVLSWGRKEGEAVSEGDLLAEIETDKATMSMDASDTGIMAKILVAAGTKDVPIGTP 180
M G++ W KEG+AV GD+LAEIETDKA M + D GI+AKILV G++++ +G
Sbjct: 14 MTEGTLAKWLVKEGDAVKAGDILAEIETDKAIMEFETVDAGIIAKILVPEGSENIAVGQV 73
Query: 181 LCVIV---ENEADVAAFKEFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 351
+ V+ E+ + VAA
Sbjct: 74 IAVMAEAGEDVSQVAASASSQISEPSEKADVAQKETADSETISIDASLDKAISNAGYGNK 133
Query: 352 XXXTCPADQ----RLFVSPYARTLAAERNIDLASAGIVGSGPDGRIRARDLD-------- 495
+ Q R+ SP A+ LA + ++DL GSGP GRI D++
Sbjct: 134 TENMTASYQEKAGRIKASPLAKRLAKKNHVDLKQVN--GSGPHGRIIKADIEAFIAEANQ 191
Query: 496 -----QVGTGVRGQVCSSTASYTDLELSNMRKVIAQRLWLSKQTIPHYYLTMEVRMDRVI 660
V T + + ++LSNMR+VIA+RL SKQ IPH YLT++V+MD ++
Sbjct: 192 ASSNPSVSTPEASGKITHDTPHNSIKLSNMRRVIARRLTESKQNIPHIYLTVDVQMDALL 251
Query: 661 EMRHKINKKL 690
++R ++N+ L
Sbjct: 252 KLRSELNESL 261
>sp|O00330|ODPX_HUMAN Pyruvate dehydrogenase protein X component, mitochondrial precursor
(Dihydrolipoamide dehydrogenase-binding protein of
pyruvate dehydrogenase complex) (Lipoyl-containing
pyruvate dehydrogenase complex component X) (E3-binding
protein) (E3BP) (proX)
Length = 501
Score = 80.5 bits (197), Expect = 4e-15
Identities = 38/70 (54%), Positives = 54/70 (77%)
Frame = +1
Query: 1 METGSVLSWGRKEGEAVSEGDLLAEIETDKATMSMDASDTGIMAKILVAAGTKDVPIGTP 180
ME G+++ W +KEGEAVS GD L EIETDKA +++DASD GI+AKI+V G+K++ +G+
Sbjct: 68 MEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSL 127
Query: 181 LCVIVENEAD 210
+ +IVE D
Sbjct: 128 IGLIVEEGED 137
Score = 44.3 bits (103), Expect = 3e-04
Identities = 19/52 (36%), Positives = 35/52 (67%)
Frame = +1
Query: 529 SSTASYTDLELSNMRKVIAQRLWLSKQTIPHYYLTMEVRMDRVIEMRHKINK 684
++ ++T++ SN+R+VIA+RL SK T+PH Y T + + V+++R + K
Sbjct: 270 NAVGTFTEIPASNIRRVIAKRLTESKSTVPHAYATADCDLGAVLKVRQDLVK 321
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,770,645
Number of Sequences: 369166
Number of extensions: 1758169
Number of successful extensions: 8214
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8106
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6631293200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)