Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_01700
(557 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q17770|PDI2_CAEEL Protein disulfide-isomerase 2 precurso... 264 1e-70
sp|P21195|PDIA1_RABIT Protein disulfide-isomerase precursor... 256 3e-68
sp|P09102|PDIA1_CHICK Protein disulfide-isomerase precursor... 255 5e-68
sp|P07237|PDIA1_HUMAN Protein disulfide-isomerase precursor... 254 1e-67
sp|P04785|PDIA1_RAT Protein disulfide-isomerase precursor (... 253 2e-67
sp|Q5R5B6|PDIA1_PONPY Protein disulfide-isomerase precursor... 253 3e-67
sp|Q8R4U2|PDIA1_CRIGR Protein disulfide-isomerase precursor... 252 4e-67
sp|P05307|PDIA1_BOVIN Protein disulfide-isomerase precursor... 252 4e-67
sp|P09103|PDIA1_MOUSE Protein disulfide-isomerase precursor... 251 9e-67
sp|P54399|PDI_DROME Protein disulfide-isomerase precursor (... 250 2e-66
>sp|Q17770|PDI2_CAEEL Protein disulfide-isomerase 2 precursor (PDI 1) (Prolyl
4-hydroxylase beta subunit)
Length = 493
Score = 264 bits (675), Expect = 1e-70
Identities = 113/179 (63%), Positives = 150/179 (83%)
Frame = +2
Query: 2 NDRVLEFFGMTKNDTPSFRVIQLDDDMVKYKPEDASISTENLNTFVQSVLDGKIKPHLMT 181
N R++EFFG+ K++ P+ R+I L++DM K+KP+ I+TEN++ F Q+ LDG +KPHLM+
Sbjct: 294 NARIMEFFGLKKDELPAIRLISLEEDMTKFKPDFEEITTENISKFTQNYLDGSVKPHLMS 353
Query: 182 QEIPEDWDKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYKDS 361
++IPEDWDK+PVK+LVGKNF+ VA+D +K V VEFYAPWCGHCKQLAP WD+LGE + D
Sbjct: 354 EDIPEDWDKNPVKILVGKNFEQVARDNTKNVLVEFYAPWCGHCKQLAPTWDKLGEKFADD 413
Query: 362 SDVVIAKMDSTANEVEGIRIQSFPTIKYFPKGSNEIVDFEGDRTLESFKKFIDSNGKEG 538
+VIAKMDST NEVE ++IQSFPTIK+FP GSN++VD+ GDRT+E F KF+++NGKEG
Sbjct: 414 ESIVIAKMDSTLNEVEDVKIQSFPTIKFFPAGSNKVVDYTGDRTIEGFTKFLETNGKEG 472
Score = 65.9 bits (159), Expect = 7e-11
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +2
Query: 203 DKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYK-DSSDVVIA 379
++ V VL NFD V ++ + VEFYAPWCGHCK LAP + + K + SD+ +
Sbjct: 21 EEENVIVLTKDNFDEVING-NEFILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLG 79
Query: 380 KMDSTAN-EVEG-IRIQSFPTIKYFPKGSNEIVDFEGDRTLES 502
K+D+T + EV ++ +PT+K F G + ++ G R +S
Sbjct: 80 KLDATVHGEVSSKFEVRGYPTLKLFRNGKPQ--EYNGGRDHDS 120
>sp|P21195|PDIA1_RABIT Protein disulfide-isomerase precursor (PDI) (Prolyl 4-hydroxylase
beta subunit) (Cellular thyroid hormone binding protein)
(p55)
Length = 509
Score = 256 bits (653), Expect = 3e-68
Identities = 112/180 (62%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 NDRVLEFFGMTKNDTPSFRVIQLDDDMVKYKPEDASISTENLNTFVQSVLDGKIKPHLMT 181
N R+LEFFG+ K + P+ R+I L+++M KYKPE ++ E + F Q L+GKIKPHLM+
Sbjct: 299 NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESDELTAEGITEFCQRFLEGKIKPHLMS 358
Query: 182 QEIPEDWDKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYKDS 361
QE+PEDWD+ PVKVLVGKNF+ VA D K VFVEFYAPWCGHCKQLAPIWD+LGETYK+
Sbjct: 359 QELPEDWDRQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKEH 418
Query: 362 SDVVIAKMDSTANEVEGIRIQSFPTIKYFPKG-SNEIVDFEGDRTLESFKKFIDSNGKEG 538
D+VIAKMDSTANEVE +++ SFPT+K+FP G ++D+ G+RTL+ FKKF++S G++G
Sbjct: 419 QDIVIAKMDSTANEVEAVKVHSFPTLKFFPAGPGRTVIDYNGERTLDGFKKFLESGGQDG 478
Score = 62.0 bits (149), Expect = 1e-09
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +2
Query: 203 DKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQ-LGETYKDSSDVVIA 379
++ V VL NF K + VEFYAPWCGHCK LAP + + G+ + SD+ +A
Sbjct: 23 EEDNVLVLKSSNFAEELA-AHKHLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSDIRLA 81
Query: 380 KMDST--ANEVEGIRIQSFPTIKYFPKG 457
K+D+T ++ + ++ +PTIK+F G
Sbjct: 82 KVDATEESDLAQQYGVRGYPTIKFFKNG 109
>sp|P09102|PDIA1_CHICK Protein disulfide-isomerase precursor (PDI) (Prolyl 4-hydroxylase
beta subunit) (Cellular thyroid hormone binding protein)
(Retina cognin) (R-cognin)
Length = 515
Score = 255 bits (652), Expect = 5e-68
Identities = 112/180 (62%), Positives = 146/180 (81%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 NDRVLEFFGMTKNDTPSFRVIQLDDDMVKYKPEDASISTENLNTFVQSVLDGKIKPHLMT 181
N R+LEFFG+ K + P+ R+I L+++M KYKPE ++ + + F L+GKIKPHLM+
Sbjct: 303 NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESDDLTADKIKEFCNKFLEGKIKPHLMS 362
Query: 182 QEIPEDWDKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYKDS 361
Q++PEDWDK PVKVLVGKNF+ VA D +K VFVEFYAPWCGHCKQLAPIWD+LGETY+D
Sbjct: 363 QDLPEDWDKQPVKVLVGKNFEEVAFDENKNVFVEFYAPWCGHCKQLAPIWDKLGETYRDH 422
Query: 362 SDVVIAKMDSTANEVEGIRIQSFPTIKYFPKGS-NEIVDFEGDRTLESFKKFIDSNGKEG 538
++VIAKMDSTANEVE ++I SFPT+K+FP GS ++D+ G+RTLE FKKF++S G++G
Sbjct: 423 ENIVIAKMDSTANEVEAVKIHSFPTLKFFPAGSGRNVIDYNGERTLEGFKKFLESGGQDG 482
Score = 62.0 bits (149), Expect = 1e-09
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +2
Query: 203 DKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYK-DSSDVVIA 379
++ V VL NF+ A + + VEFYAPWCGHCK LAP + + K + S++ +A
Sbjct: 27 EEDGVLVLRAANFEQ-ALAAHRHLLVEFYAPWCGHCKALAPEYAKAAAQLKAEGSEIRLA 85
Query: 380 KMDST--ANEVEGIRIQSFPTIKYFPKG 457
K+D+T A + ++ +PTIK+F G
Sbjct: 86 KVDATEEAELAQQFGVRGYPTIKFFRNG 113
>sp|P07237|PDIA1_HUMAN Protein disulfide-isomerase precursor (PDI) (Prolyl 4-hydroxylase
beta subunit) (Cellular thyroid hormone binding protein)
(p55)
Length = 508
Score = 254 bits (648), Expect = 1e-67
Identities = 111/180 (61%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 NDRVLEFFGMTKNDTPSFRVIQLDDDMVKYKPEDASISTENLNTFVQSVLDGKIKPHLMT 181
N R+LEFFG+ K + P+ R+I L+++M KYKPE ++ E + F L+GKIKPHLM+
Sbjct: 298 NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMS 357
Query: 182 QEIPEDWDKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYKDS 361
QE+PEDWDK PVKVLVGKNF+ VA D K VFVEFYAPWCGHCKQLAPIWD+LGETYKD
Sbjct: 358 QELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH 417
Query: 362 SDVVIAKMDSTANEVEGIRIQSFPTIKYFPKGSNE-IVDFEGDRTLESFKKFIDSNGKEG 538
++VIAKMDSTANEVE +++ SFPT+K+FP ++ ++D+ G+RTL+ FKKF++S G++G
Sbjct: 418 ENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDG 477
Score = 63.2 bits (152), Expect = 4e-10
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Frame = +2
Query: 173 LMTQEIPEDWDKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQ-LGET 349
L+ + PE+ D V VL NF A K + VEFYAPWCGHCK LAP + + G+
Sbjct: 14 LVRADAPEEEDH--VLVLRKSNF-AEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKL 70
Query: 350 YKDSSDVVIAKMDST--ANEVEGIRIQSFPTIKYFPKG 457
+ S++ +AK+D+T ++ + ++ +PTIK+F G
Sbjct: 71 KAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNG 108
>sp|P04785|PDIA1_RAT Protein disulfide-isomerase precursor (PDI) (Prolyl 4-hydroxylase
beta subunit) (Cellular thyroid hormone binding protein)
Length = 509
Score = 253 bits (647), Expect = 2e-67
Identities = 111/180 (61%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 NDRVLEFFGMTKNDTPSFRVIQLDDDMVKYKPEDASISTENLNTFVQSVLDGKIKPHLMT 181
N R+LEFFG+ K + P+ R+I L+++M KYKPE ++ E + F L+GKIKPHLM+
Sbjct: 300 NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESDELTAEKITQFCHHFLEGKIKPHLMS 359
Query: 182 QEIPEDWDKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYKDS 361
QE+PEDWDK PVKVLVGKNF+ VA D K VFVEFYAPWCGHCKQLAPIWD+LGETYKD
Sbjct: 360 QELPEDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH 419
Query: 362 SDVVIAKMDSTANEVEGIRIQSFPTIKYFPKGSNE-IVDFEGDRTLESFKKFIDSNGKEG 538
++VIAKMDSTANEVE +++ SFPT+K+FP ++ ++D+ G+RTL+ FKKF++S G++G
Sbjct: 420 ENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDG 479
Score = 59.3 bits (142), Expect = 6e-09
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = +2
Query: 203 DKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYK-DSSDVVIA 379
++ V VL NF A + VEFYAPWCGHCK LAP + + K + S++ +A
Sbjct: 24 EEDNVLVLKKSNF-AEALAAHNYLLVEFYAPWCGHCKALAPEYAKAAAKLKAEGSEIRLA 82
Query: 380 KMDST--ANEVEGIRIQSFPTIKYFPKG 457
K+D+T ++ + ++ +PTIK+F G
Sbjct: 83 KVDATEESDLAQQYGVRGYPTIKFFKNG 110
>sp|Q5R5B6|PDIA1_PONPY Protein disulfide-isomerase precursor (PDI) (Prolyl 4-hydroxylase
beta subunit)
Length = 508
Score = 253 bits (645), Expect = 3e-67
Identities = 110/180 (61%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 NDRVLEFFGMTKNDTPSFRVIQLDDDMVKYKPEDASISTENLNTFVQSVLDGKIKPHLMT 181
N R+LEFFG+ K + P+ R+I L+++M KYKPE ++ E + F L+GKIKPHLM+
Sbjct: 298 NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMS 357
Query: 182 QEIPEDWDKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYKDS 361
QE+P+DWDK PVKVLVGKNF+ VA D K VFVEFYAPWCGHCKQLAPIWD+LGETYKD
Sbjct: 358 QELPDDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH 417
Query: 362 SDVVIAKMDSTANEVEGIRIQSFPTIKYFPKGSNE-IVDFEGDRTLESFKKFIDSNGKEG 538
++VIAKMDSTANEVE +++ SFPT+K+FP ++ ++D+ G+RTL+ FKKF++S G++G
Sbjct: 418 ENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDG 477
Score = 63.2 bits (152), Expect = 4e-10
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Frame = +2
Query: 173 LMTQEIPEDWDKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQ-LGET 349
L+ + PE+ D V VL NF A K + VEFYAPWCGHCK LAP + + G+
Sbjct: 14 LVCADAPEEEDH--VLVLRKSNF-AEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKL 70
Query: 350 YKDSSDVVIAKMDST--ANEVEGIRIQSFPTIKYFPKG 457
+ S++ +AK+D+T ++ + ++ +PTIK+F G
Sbjct: 71 KAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNG 108
>sp|Q8R4U2|PDIA1_CRIGR Protein disulfide-isomerase precursor (PDI) (Prolyl 4-hydroxylase
beta subunit) (p58)
Length = 509
Score = 252 bits (644), Expect = 4e-67
Identities = 110/180 (61%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 NDRVLEFFGMTKNDTPSFRVIQLDDDMVKYKPEDASISTENLNTFVQSVLDGKIKPHLMT 181
N R+LEFFG+ K + P+ R+I L+++M KYKPE ++ E + F L+GKIKPHLM+
Sbjct: 300 NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESDELTAEKITEFCHRFLEGKIKPHLMS 359
Query: 182 QEIPEDWDKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYKDS 361
QE+PEDWDK PVKVLVGKNF+ VA D K VFVEFYAPWCGHCKQLAPIWD+LGETYKD
Sbjct: 360 QELPEDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH 419
Query: 362 SDVVIAKMDSTANEVEGIRIQSFPTIKYFPKGSNE-IVDFEGDRTLESFKKFIDSNGKEG 538
+++IAKMDSTANEVE +++ SFPT+K+FP ++ ++D+ G+RTL+ FKKF++S G++G
Sbjct: 420 ENIIIAKMDSTANEVEAVKVHSFPTLKFFPATADRTVIDYNGERTLDGFKKFLESGGQDG 479
Score = 60.8 bits (146), Expect = 2e-09
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = +2
Query: 185 EIPEDWDKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYK-DS 361
+ PE+ D V VL NF A + VEFYAPWCGHCK LAP + + K +
Sbjct: 20 DAPEEEDN--VLVLKKSNF-AEALAAHNYLLVEFYAPWCGHCKALAPEYAKAAAKLKAEG 76
Query: 362 SDVVIAKMDST--ANEVEGIRIQSFPTIKYFPKG 457
S++ +AK+D+T ++ + ++ +PTIK+F G
Sbjct: 77 SEIRLAKVDATEESDLAQQYGVRGYPTIKFFKNG 110
>sp|P05307|PDIA1_BOVIN Protein disulfide-isomerase precursor (PDI) (Prolyl 4-hydroxylase
beta subunit) (Cellular thyroid hormone binding protein)
(p55)
Length = 510
Score = 252 bits (644), Expect = 4e-67
Identities = 110/180 (61%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 NDRVLEFFGMTKNDTPSFRVIQLDDDMVKYKPEDASISTENLNTFVQSVLDGKIKPHLMT 181
N R+LEFFG+ K + P+ R+I L+++M KYKPE ++ E + F L+GKIKPHLM+
Sbjct: 300 NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESDELTAEKITEFCHRFLEGKIKPHLMS 359
Query: 182 QEIPEDWDKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYKDS 361
QE+P+DWDK PVKVLVGKNF+ VA D K VFVEFYAPWCGHCKQLAPIWD+LGETYKD
Sbjct: 360 QELPDDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH 419
Query: 362 SDVVIAKMDSTANEVEGIRIQSFPTIKYFPKGSNE-IVDFEGDRTLESFKKFIDSNGKEG 538
++VIAKMDSTANEVE +++ SFPT+K+FP ++ ++D+ G+RTL+ FKKF++S G++G
Sbjct: 420 ENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDG 479
Score = 63.2 bits (152), Expect = 4e-10
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +2
Query: 203 DKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQ-LGETYKDSSDVVIA 379
++ V VL NFD A K + VEFYAPWCGHCK LAP + + G+ + S++ +A
Sbjct: 24 EEDHVLVLHKGNFDE-ALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLA 82
Query: 380 KMDST--ANEVEGIRIQSFPTIKYFPKG 457
K+D+T ++ + ++ +PTIK+F G
Sbjct: 83 KVDATEESDLAQQYGVRGYPTIKFFKNG 110
>sp|P09103|PDIA1_MOUSE Protein disulfide-isomerase precursor (PDI) (Prolyl 4-hydroxylase
beta subunit) (Cellular thyroid hormone binding protein)
(p55) (Erp59)
Length = 509
Score = 251 bits (641), Expect = 9e-67
Identities = 109/180 (60%), Positives = 144/180 (80%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 NDRVLEFFGMTKNDTPSFRVIQLDDDMVKYKPEDASISTENLNTFVQSVLDGKIKPHLMT 181
N R+LEFFG+ K + P+ R+I L+++M KYKPE ++ E + F L+GKIKPHLM+
Sbjct: 300 NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESDELTAEKITEFCHRFLEGKIKPHLMS 359
Query: 182 QEIPEDWDKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYKDS 361
QE+PEDWDK PVKVLVG NF+ VA D K VFVEFYAPWCGHCKQLAPIWD+LGETYKD
Sbjct: 360 QEVPEDWDKQPVKVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH 419
Query: 362 SDVVIAKMDSTANEVEGIRIQSFPTIKYFPKGSNE-IVDFEGDRTLESFKKFIDSNGKEG 538
+++IAKMDSTANEVE +++ SFPT+K+FP ++ ++D+ G+RTL+ FKKF++S G++G
Sbjct: 420 ENIIIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDG 479
Score = 62.0 bits (149), Expect = 1e-09
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Frame = +2
Query: 203 DKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYK-DSSDVVIA 379
++ V VL NF+ A K + VEFYAPWCGHCK LAP + + K + S++ +A
Sbjct: 24 EEDNVLVLKKSNFEE-ALAAHKYLLVEFYAPWCGHCKALAPEYAKRAAKLKAEGSEIRLA 82
Query: 380 KMDST--ANEVEGIRIQSFPTIKYFPKG 457
K+D+T ++ + ++ +PTIK+F G
Sbjct: 83 KVDATEESDLAQQYGVRGYPTIKFFKNG 110
>sp|P54399|PDI_DROME Protein disulfide-isomerase precursor (PDI)
Length = 496
Score = 250 bits (638), Expect = 2e-66
Identities = 111/175 (63%), Positives = 142/175 (81%)
Frame = +2
Query: 8 RVLEFFGMTKNDTPSFRVIQLDDDMVKYKPEDASISTENLNTFVQSVLDGKIKPHLMTQE 187
R+ EFFGM K + P+ R+I+L++DM KYKPE +S E + F++ LDGK+K HL++QE
Sbjct: 300 RIFEFFGMNKEEVPTIRLIKLEEDMAKYKPESDDLSAETIEAFLKKFLDGKLKQHLLSQE 359
Query: 188 IPEDWDKSPVKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYKDSSD 367
+PEDWDK+PVKVLV NF++VA D SK+V VEFYAPWCGHCKQLAPI+DQL E YKD+ D
Sbjct: 360 LPEDWDKNPVKVLVSSNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAEKYKDNED 419
Query: 368 VVIAKMDSTANEVEGIRIQSFPTIKYFPKGSNEIVDFEGDRTLESFKKFIDSNGK 532
+VIAKMDSTANE+E I+I SFPTIKYF K N+++DF DRTL+ F KF+D+NG+
Sbjct: 420 IVIAKMDSTANELESIKISSFPTIKYFRKEDNKVIDFNLDRTLDDFVKFLDANGE 474
Score = 62.4 bits (150), Expect = 7e-10
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Frame = +2
Query: 215 VKVLVGKNFDTVAKDTSKAVFVEFYAPWCGHCKQLAPIWDQLGETYKD-SSDVVIAKMDS 391
V V NF + D ++ V VEFYAPWCGHCK LAP + + + + S + +AK+D+
Sbjct: 29 VLVATVDNFKQLIAD-NEFVLVEFYAPWCGHCKALAPEYAKAAQQLAEKESPIKLAKVDA 87
Query: 392 TANE--VEGIRIQSFPTIKYFPKGSNEIVDFEGDR 490
T E ++ +PT+K+F GS V++ G R
Sbjct: 88 TVEGELAEQYAVRGYPTLKFFRSGSP--VEYSGGR 120
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,724,058
Number of Sequences: 369166
Number of extensions: 1257238
Number of successful extensions: 4303
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4194
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3980545740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)