Planaria EST Database


DrC_01570

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01570
         (806 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9CYH2|CJ058_MOUSE  Protein C10orf58 homolog precursor          50   9e-06
sp|Q9BRX8|CJ058_HUMAN  Protein C10orf58 precursor                  47   8e-05
sp|Q6AXX6|CJ058_RAT  Protein C10orf58 homolog precursor            47   8e-05
sp|Q9ZUU2|U308_ARATH  UPF0308 protein At2g37240, chloroplast...    40   0.006
sp|Q9D1A0|CI021_MOUSE  UPF0308 protein C9orf21 homolog             36   0.11 
sp|Q7RTV5|CI21_HUMAN  UPF0308 protein C9orf21                      35   0.18 
sp|P55012|S12A2_MOUSE  Solute carrier family 12 member 2 (Bu...    34   0.54 
sp|Q8AV19|CI021_FUGRU  UPF0308 protein C9orf21 homolog (fmHP)      32   1.6  
sp|P55011|S12A2_HUMAN  Solute carrier family 12 member 2 (Bu...    31   3.5  
sp|P06291|ATPF_MARPO  ATP synthase B chain (ATPase subunit I)      31   4.6  
>sp|Q9CYH2|CJ058_MOUSE Protein C10orf58 homolog precursor
          Length = 218

 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 3/152 (1%)
 Frame = +2

Query: 98  KTVQMDSFWKDSKCVITFFRRFG*SFCRLAAKRLSELTPILTSHNVRHXXXXXXXXXXXX 277
           +T +    W+ +  VI   RR G   CR  A  L  L P L    V              
Sbjct: 51  RTFKAKELWEKNGAVIMAVRRPGCFLCRAEAADLMSLKPKLDELGVPLYAVVKEQVKREV 110

Query: 278 XXXXQYFNGELYVDIDKKSFTNLGFKKYSFMGV--LGAVFSSASRNSLSEARSYGGNMKG 451
                YF GE+++D +KK F     +K  FMG+  LG  ++S    +      + GN++G
Sbjct: 111 EDFQPYFKGEIFLD-EKKKFYGPERRKMMFMGLIRLGVWYNSFRAWN----GGFSGNLEG 165

Query: 452 DGYQNGGTIVVDQG-GSLLFSYKQENVAEHAS 544
           +G+  GG  V+  G   +L  ++++   +  +
Sbjct: 166 EGFILGGVFVIGSGKQGILLEHREKEFGDRVN 197
>sp|Q9BRX8|CJ058_HUMAN Protein C10orf58 precursor
          Length = 229

 Score = 46.6 bits (109), Expect = 8e-05
 Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
 Frame = +2

Query: 98  KTVQMDSFWKDSKCVITFFRRFG*SFCRLAAKRLSELTPILTSHNVRHXXXXXXXXXXXX 277
           +T +    W+ +  VI   RR G   CR  A  LS L  +L    V              
Sbjct: 62  RTFKAKELWEKNGAVIMAVRRPGCFLCREEAADLSSLKSMLDQLGVPLYAVVKEHIRTEV 121

Query: 278 XXXXQYFNGELYVDIDKKSFTNLGFKKYSFMGVLG-AVFSSASRNSLSEARSYGGNMKGD 454
                YF GE+++D +KK F     +K  FMG +   V+ +  R   +    + GN++G+
Sbjct: 122 KDFQPYFKGEIFLD-EKKKFYGPQRRKMMFMGFIRLGVWYNFFR---AWNGGFSGNLEGE 177

Query: 455 GYQNGGTIVVDQG 493
           G+  GG  VV  G
Sbjct: 178 GFILGGVFVVGSG 190
>sp|Q6AXX6|CJ058_RAT Protein C10orf58 homolog precursor
          Length = 229

 Score = 46.6 bits (109), Expect = 8e-05
 Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
 Frame = +2

Query: 98  KTVQMDSFWKDSKCVITFFRRFG*SFCRLAAKRLSELTPILTSHNVRHXXXXXXXXXXXX 277
           +T +    W+ +  VI   RR G   CR  A  L  L P L    V              
Sbjct: 62  RTFKAKELWEKNGAVIMAVRRPGCFLCRAEAADLMSLKPKLDELGVPLYAVVKEKVKREV 121

Query: 278 XXXXQYFNGELYVDIDKKSFTNLGFKKYSFMGV--LGAVFSSASRNSLSEARSYGGNMKG 451
                YF GE+++D +KK F     +K   MG+  LG  ++S      +    + GN +G
Sbjct: 122 EDFQPYFKGEIFLD-EKKKFYGPERRKMMLMGLVRLGVWYNSFR----AWKGGFSGNFEG 176

Query: 452 DGYQNGGTIVVDQG 493
           +G+  GG  V+  G
Sbjct: 177 EGFILGGVFVIGSG 190
>sp|Q9ZUU2|U308_ARATH UPF0308 protein At2g37240, chloroplast precursor
          Length = 248

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 36/156 (23%), Positives = 58/156 (37%), Gaps = 12/156 (7%)
 Frame = +2

Query: 62  ALNLVKNASDLTKTVQMDSFWKDSKCVITFFRRFG*SFCRLAAKRLSELTPILTSHNVRH 241
           +L+ VK        + +   WKD K V+ F R FG   CR  A  L+E   ++ +  V  
Sbjct: 70  SLDTVKVLDLRGNEIPISDLWKDRKAVVAFARHFGCVLCRKRAAYLAEKKDVMDASGVAL 129

Query: 242 XXXXXXXXXXXXXXXXQ-YFNGELYVDIDKKSFTNLGFKKYSFMGVLGAVFSSASRNSLS 418
                           Q  F GE+Y D +  S+  L      F+  +   F+  +   + 
Sbjct: 130 VLIGPGSIDQANTFVEQTKFKGEVYADPNHASYEAL-----EFVSGVSVTFTPKAAMKIL 184

Query: 419 EARSYG-----------GNMKGDGYQNGGTIVVDQG 493
           E+   G             ++  G+Q GG +V   G
Sbjct: 185 ESYMEGYRQDWKLSFMKDTVERGGWQQGGILVAGPG 220
>sp|Q9D1A0|CI021_MOUSE UPF0308 protein C9orf21 homolog
          Length = 226

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
 Frame = +2

Query: 296 FNGELYVDIDKKSFTNLGFKK---YSFMGVLGAVFSSASRNSLSEA-RSYGG---NMKGD 454
           ++ E+YVD +++ +  LG K+    S  G    + S+    SL    R+  G   + +GD
Sbjct: 113 YSHEIYVDPEREIYKRLGMKRGEEISSSGQSPHIKSNLLSGSLQSLWRAVTGPLFDFQGD 172

Query: 455 GYQNGGTIVVDQGGSLLFSYKQENVAEH 538
             Q GGT+++  G ++ F ++  N  +H
Sbjct: 173 PAQQGGTLILGPGNNIHFVHRDRNRLDH 200
>sp|Q7RTV5|CI21_HUMAN UPF0308 protein C9orf21
          Length = 226

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
 Frame = +2

Query: 296 FNGELYVDIDKKSFTNLGFKKYSFMGVLGA---VFSSASRNSLSEA-RSYGG---NMKGD 454
           ++ E+YVD +++ +  LG K+   +   G    + S+    SL    R+  G   + +GD
Sbjct: 113 YSHEIYVDPEREIYKRLGMKRGEEIASSGQSPHIKSNLLSGSLQSLWRAVTGPLFDFQGD 172

Query: 455 GYQNGGTIVVDQGGSLLFSYKQENVAEH 538
             Q GGT+++  G ++ F ++  N  +H
Sbjct: 173 PAQQGGTLILGPGNNIHFIHRDRNRLDH 200
>sp|P55012|S12A2_MOUSE Solute carrier family 12 member 2 (Bumetanide-sensitive
           sodium-(potassium)-chloride cotransporter 1)
           (Basolateral Na-K-Cl symporter)
          Length = 1205

 Score = 33.9 bits (76), Expect = 0.54
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +2

Query: 392 SSASRNSLSEARSYGGNMKGDGYQNGGTIVVDQGGSL 502
           SS++ +SLS+A   GG+     +QNGG  V+ +G SL
Sbjct: 144 SSSADDSLSDAAGVGGDGPNVSFQNGGDTVLSEGSSL 180
>sp|Q8AV19|CI021_FUGRU UPF0308 protein C9orf21 homolog (fmHP)
          Length = 226

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
 Frame = +2

Query: 305 ELYVDIDKKSFTNLGFKKYSFMG--------VLGAVFSSASRNSLSEARSYGGNMKGDGY 460
           E+YVD D+  +  LG K+             V   +F+   ++          + +GD +
Sbjct: 115 EIYVDPDRHIYQKLGMKREETFTDSAQPSPHVKSGIFAGQMKSIWRAMTGPIFDFQGDLH 174

Query: 461 QNGGTIVVDQGGSLLFSYKQENVAEH 538
           Q GG I+V  G  + F +   N  +H
Sbjct: 175 QQGGAIIVGPGAQVHFCHFDTNRLDH 200
>sp|P55011|S12A2_HUMAN Solute carrier family 12 member 2 (Bumetanide-sensitive
           sodium-(potassium)-chloride cotransporter 1)
           (Basolateral Na-K-Cl symporter)
          Length = 1212

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 392 SSASRNSLSEARSYGGNMKGDGYQNGGTIVVDQGGSL 502
           SS++ +SLS+A   G +     +QNGG  V+ +G SL
Sbjct: 149 SSSAEDSLSDAAGVGVDGPNVSFQNGGDTVLSEGSSL 185
>sp|P06291|ATPF_MARPO ATP synthase B chain (ATPase subunit I)
          Length = 184

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -2

Query: 556 NVIKTGVLCNIFLFIGKQQTSSLINNNSTTVLVSI 452
           N+I  GV+  + ++ GK   S+L+NN   T+L +I
Sbjct: 30  NLINLGVVLGLLVYFGKGVLSNLLNNRKLTILNTI 64
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,159,110
Number of Sequences: 369166
Number of extensions: 1483486
Number of successful extensions: 3489
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3481
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7666799535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)