Planaria EST Database


DrC_01552

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01552
         (451 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q80UU9|PGRC2_MOUSE  Membrane associated progesterone rece...   115   3e-26
sp|Q5XIU9|PGRC2_RAT  Membrane associated progesterone recept...   115   3e-26
sp|O15173|PGRC2_HUMAN  Membrane associated progesterone rece...   115   4e-26
sp|Q95250|PGRC1_PIG  Membrane associated progesterone recept...   111   6e-25
sp|O55022|PGRC1_MOUSE  Membrane associated progesterone rece...   110   1e-24
sp|P70580|PGRC1_RAT  Membrane associated progesterone recept...   110   1e-24
sp|O00264|PGRC1_HUMAN  Membrane associated progesterone rece...   109   2e-24
sp|O13995|YL81_SCHPO  Hypothetical protein C25B8.01 in chrom...    74   2e-13
sp|Q12091|DAP1_YEAST  Damage response protein 1                    65   9e-11
sp|Q9M2Z4|SBP2_ARATH  Putative steroid binding protein 2 (At...    64   1e-10
>sp|Q80UU9|PGRC2_MOUSE Membrane associated progesterone receptor component 2
          Length = 214

 Score =  115 bits (289), Expect = 3e-26
 Identities = 53/93 (56%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   VTSGSNFYGPNGPYGCLAGRDASRALATFCLDNSCLKEDYDDISDLSPSEMDQLKEWEMQ 182
           VT GS FYGP GPYG  AGRDASR LATFCLD   L+++YDD+SDL+  +M+ ++EWEMQ
Sbjct: 121 VTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQ 180

Query: 183 FESKYYKIGKLLRPG-EVCEIIDSEEDDSNSQQ 278
           F+ KY  +G+LL+PG E  E  D E+   +S+Q
Sbjct: 181 FKEKYDYVGRLLKPGEEPSEYTDEEDTKDHSKQ 213
>sp|Q5XIU9|PGRC2_RAT Membrane associated progesterone receptor component 2
          Length = 217

 Score =  115 bits (289), Expect = 3e-26
 Identities = 53/93 (56%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   VTSGSNFYGPNGPYGCLAGRDASRALATFCLDNSCLKEDYDDISDLSPSEMDQLKEWEMQ 182
           VT GS FYGP GPYG  AGRDASR LATFCLD   L+++YDD+SDL+  +M+ ++EWEMQ
Sbjct: 124 VTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQ 183

Query: 183 FESKYYKIGKLLRPG-EVCEIIDSEEDDSNSQQ 278
           F+ KY  +G+LL+PG E  E  D E+   +S+Q
Sbjct: 184 FKEKYDYVGRLLKPGEEPSEYTDEEDTKDHSKQ 216
>sp|O15173|PGRC2_HUMAN Membrane associated progesterone receptor component 2 (Progesterone
           membrane binding protein) (Steroid receptor protein DG6)
          Length = 223

 Score =  115 bits (288), Expect = 4e-26
 Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   VTSGSNFYGPNGPYGCLAGRDASRALATFCLDNSCLKEDYDDISDLSPSEMDQLKEWEMQ 182
           VT GS FYGP GPYG  AGRDASR LATFCLD   L+++YDD+SDL+  +M+ ++EWEMQ
Sbjct: 130 VTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQ 189

Query: 183 FESKYYKIGKLLRPGEVCEIIDSEED--DSNSQ 275
           F+ KY  +G+LL+PGE       EED  D N Q
Sbjct: 190 FKEKYDYVGRLLKPGEEPSEYTDEEDTKDHNKQ 222
>sp|Q95250|PGRC1_PIG Membrane associated progesterone receptor component 1
          Length = 194

 Score =  111 bits (278), Expect = 6e-25
 Identities = 48/86 (55%), Positives = 62/86 (72%)
 Frame = +3

Query: 3   VTSGSNFYGPNGPYGCLAGRDASRALATFCLDNSCLKEDYDDISDLSPSEMDQLKEWEMQ 182
           VT G  FYGP GPYG  AGRDASR LATFCLD   LK++YDD+SDL+P++ + L +W+ Q
Sbjct: 99  VTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQ 158

Query: 183 FESKYYKIGKLLRPGEVCEIIDSEED 260
           F  KY+ +GKLL+ GE   +   EE+
Sbjct: 159 FTFKYHHVGKLLKEGEEPTVYSDEEE 184
>sp|O55022|PGRC1_MOUSE Membrane associated progesterone receptor component 1
          Length = 195

 Score =  110 bits (275), Expect = 1e-24
 Identities = 47/86 (54%), Positives = 62/86 (72%)
 Frame = +3

Query: 3   VTSGSNFYGPNGPYGCLAGRDASRALATFCLDNSCLKEDYDDISDLSPSEMDQLKEWEMQ 182
           VT G  FYGP GPYG  AGRDASR LATFCLD   LK++YDD+SDL+P++ + L +W+ Q
Sbjct: 100 VTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQ 159

Query: 183 FESKYYKIGKLLRPGEVCEIIDSEED 260
           F  KY+ +GKLL+ GE   +   +E+
Sbjct: 160 FTFKYHHVGKLLKEGEEPTVYSDDEE 185
>sp|P70580|PGRC1_RAT Membrane associated progesterone receptor component 1 (Acidic 25
           kDa protein) (25-DX)
          Length = 195

 Score =  110 bits (275), Expect = 1e-24
 Identities = 47/86 (54%), Positives = 62/86 (72%)
 Frame = +3

Query: 3   VTSGSNFYGPNGPYGCLAGRDASRALATFCLDNSCLKEDYDDISDLSPSEMDQLKEWEMQ 182
           VT G  FYGP GPYG  AGRDASR LATFCLD   LK++YDD+SDL+P++ + L +W+ Q
Sbjct: 100 VTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQ 159

Query: 183 FESKYYKIGKLLRPGEVCEIIDSEED 260
           F  KY+ +GKLL+ GE   +   +E+
Sbjct: 160 FTFKYHHVGKLLKEGEEPTVYSDDEE 185
>sp|O00264|PGRC1_HUMAN Membrane associated progesterone receptor component 1 (mPR)
          Length = 195

 Score =  109 bits (273), Expect = 2e-24
 Identities = 48/86 (55%), Positives = 61/86 (70%)
 Frame = +3

Query: 3   VTSGSNFYGPNGPYGCLAGRDASRALATFCLDNSCLKEDYDDISDLSPSEMDQLKEWEMQ 182
           VT G  FYGP GPYG  AGRDASR LATFCLD   LK++YDD+SDL+ ++ + L +WE Q
Sbjct: 100 VTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDWESQ 159

Query: 183 FESKYYKIGKLLRPGEVCEIIDSEED 260
           F  KY+ +GKLL+ GE   +   EE+
Sbjct: 160 FTFKYHHVGKLLKEGEEPTVYSDEEE 185
>sp|O13995|YL81_SCHPO Hypothetical protein C25B8.01 in chromosome I
          Length = 166

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
 Frame = +3

Query: 3   VTSGSNFYGPNGPYGCLAGRDASRALATFCLDNSCL----KEDYDDISDLSPSEMDQLKE 170
           VT GS FYGP GPY   AG DASR LA    D+  +     E+ DD SDL+  E   L +
Sbjct: 70  VTMGSKFYGPQGPYSAFAGHDASRGLAKNSFDDEFIPDSDAEELDDCSDLNDEERQALND 129

Query: 171 WEMQFESKYYKIGKLLRPGE 230
           W+  F+ KY  +G+L+ P E
Sbjct: 130 WKAFFDQKYQAVGRLISpre 149
>sp|Q12091|DAP1_YEAST Damage response protein 1
          Length = 152

 Score = 64.7 bits (156), Expect = 9e-11
 Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
 Frame = +3

Query: 6   TSGSNFYGPNGPYGCLAGRDASRALATFCLDNSCLK---EDYDDISDLSPSEMDQLKEWE 176
           T G  FYGP+GPY   AG DASR LA    D   +K   +  D + DL+  ++D L EW+
Sbjct: 72  TRGRQFYGPSGPYTNFAGHDASRGLALNSFDLDVIKDWDQPIDPLDDLTKEQIDALDEWQ 131

Query: 177 MQFESKYYKIGKLL-RPG 227
             FE+KY  IG L+  PG
Sbjct: 132 EHFENKYPCIGTLIPEPG 149
>sp|Q9M2Z4|SBP2_ARATH Putative steroid binding protein 2 (AtMP2)
          Length = 233

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 32/71 (45%), Positives = 43/71 (60%)
 Frame = +3

Query: 3   VTSGSNFYGPNGPYGCLAGRDASRALATFCLDNSCLKEDYDDISDLSPSEMDQLKEWEMQ 182
           V+    FYGP GPY   AG+DASRALA    ++  L     DIS L   E++ L++WE +
Sbjct: 99  VSQSRMFYGPGGPYALFAGKDASRALAKMSFEDQDLT---GDISGLGAFELEALQDWEYK 155

Query: 183 FESKYYKIGKL 215
           F SKY K+G +
Sbjct: 156 FMSKYVKVGTI 166
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,833,959
Number of Sequences: 369166
Number of extensions: 812498
Number of successful extensions: 2207
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2194
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2444192520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)