Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_01547
(878 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q28247|CO4A5_CANFA Collagen alpha 5(IV) chain precursor 55 3e-07
sp|P27393|CO4A2_ASCSU Collagen alpha 2(IV) chain precursor 51 4e-06
sp|P02462|CO4A1_HUMAN Collagen alpha 1(IV) chain precursor 50 8e-06
sp|P04258|CA13_BOVIN Collagen alpha 1(III) chain 50 8e-06
sp|P02463|CO4A1_MOUSE Collagen alpha 1(IV) chain precursor 50 1e-05
sp|P17140|CO4A2_CAEEL Collagen alpha 2(IV) chain precursor ... 49 2e-05
sp|P05997|CO5A2_HUMAN Collagen alpha 2(V) chain precursor 49 2e-05
sp|Q90584|COHA1_CHICK Collagen alpha 1(XVII) chain (Bullous... 48 4e-05
sp|P15988|CO6A2_CHICK Collagen alpha 2(VI) chain precursor 47 5e-05
sp|P08120|CO4A1_DROME Collagen alpha 1(IV) chain precursor 47 9e-05
>sp|Q28247|CO4A5_CANFA Collagen alpha 5(IV) chain precursor
Length = 1691
Score = 54.7 bits (130), Expect = 3e-07
Identities = 49/184 (26%), Positives = 62/184 (33%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+PG GL+GQ G TG PGLKGSIG G GP G+KG+
Sbjct: 987 PGDPGQPGLSGQPG---LPGPSGPKGNPGLPGKPGLTGPPGLKGSIGDMGFPGPQGVKGS 1043
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G PG +KGEKG+ G + G
Sbjct: 1044 PGPPGV-----PGQPGSPGLPGQKGEKGDPGVSGIGLPGLPGPKGEAGLPGYPGNPGIKG 1098
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
++G G+KG+ G G G G+PG+PG
Sbjct: 1099 SMG------DTGLPGLPGTPGAKGQPGLPGFPGTPGLPGPKGIN---GPPGNPGLPGEPG 1149
Query: 638 VKGG 649
GG
Sbjct: 1150 PVGG 1153
Score = 43.5 bits (101), Expect = 8e-04
Identities = 25/64 (39%), Positives = 29/64 (45%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GEPGL+G+ G+ G G PG +GS GI G GPMG G
Sbjct: 834 GEPGLHGIPGEKGDPGPPGFDVL-------------GPPGERGSPGIPGAPGPMGPPGTP 880
Query: 281 GLPG 292
GLPG
Sbjct: 881 GLPG 884
Score = 43.1 bits (100), Expect = 0.001
Identities = 25/65 (38%), Positives = 27/65 (41%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGL G G NG G PG KG+ G +GI GP G KG
Sbjct: 1124 PGTPGLPGPKGINGPPGNPGLPGEPGPVGGGGRPGPPGPPGEKGNPGQDGIPGPAGQKGE 1183
Query: 278 NGLPG 292
G PG
Sbjct: 1184 PGQPG 1188
Score = 43.1 bits (100), Expect = 0.001
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMG---L 268
PG+PG NGL G +G+ G+PGL G G G+DGP G +
Sbjct: 1411 PGDPGRNGLPGFDGAGGRK------------------GDPGLPGQPGTRGLDGPPGPDGM 1452
Query: 269 KGANGLPGTS 298
+G G PGTS
Sbjct: 1453 QGPPGPPGTS 1462
Score = 42.4 bits (98), Expect = 0.002
Identities = 44/189 (23%), Positives = 53/189 (28%), Gaps = 6/189 (3%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG+ G G G G+PGL G G G+ GP G+ G
Sbjct: 1091 PGNPGIKGSMGDTG------------LPGLPGTPGAKGQPGLPGFPGTPGLPGPKGINGP 1138
Query: 278 NGLPG-TSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVN 454
G PG GEKGN G +
Sbjct: 1139 PGNPGLPGEPGPVGGGGRPGPPGPPGEKGNPGQDGIPGPAGQKGEPGQPGFGIPGPPGLP 1198
Query: 455 GTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEV-----GDMGQDG 619
G G+ + G KGE GFQ G+ G G
Sbjct: 1199 GLSGQKGDGGLPGIPGNPGLPGPKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGNPGPQG 1258
Query: 620 IPGKPGVKG 646
PG+PG G
Sbjct: 1259 PPGRPGPTG 1267
Score = 42.0 bits (97), Expect = 0.002
Identities = 28/93 (30%), Positives = 31/93 (33%), Gaps = 2/93 (2%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXX--TGEPGLKGSIGIEGIDGPMGLK 271
PG PGL G+ G G G PG G IG+EG GP G
Sbjct: 686 PGPPGLPGIPGNKGEPGIPGIGLPGPPGPKGFPGIQGPPGAPGTPGRIGLEGPSGPPGFP 745
Query: 272 GANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G G PG L G KG+ G
Sbjct: 746 GPKGEPGLGLPGPPGPPGLPGFKGTLGPKGDRG 778
Score = 41.6 bits (96), Expect = 0.003
Identities = 45/183 (24%), Positives = 52/183 (28%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGL G AG +G G PG G +GI G G GLKG
Sbjct: 877 PGTPGLPGKAGASG------------FPGAKGEMGMMGPPGPPGPLGIPGRSGVPGLKGD 924
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
NGL G +GEKG G + G
Sbjct: 925 NGLQG-----------QPGPPGPEGEKGGKGEPGLPGPPGPVDPDLLGSKGEKGDPGLPG 973
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
G + G KG G G G G+PGKPG
Sbjct: 974 IPG---------------VSGPKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGLPGKPG 1018
Query: 638 VKG 646
+ G
Sbjct: 1019 LTG 1021
Score = 39.3 bits (90), Expect = 0.015
Identities = 23/65 (35%), Positives = 24/65 (36%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG GL G G G PG G GI+G GP GL G
Sbjct: 134 PGSPGFPGLEGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGPAGPTGLPGP 193
Query: 278 NGLPG 292
G PG
Sbjct: 194 IGPPG 198
Score = 39.3 bits (90), Expect = 0.015
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+PGL GL G G G G+KG G+ G+ G G+KG
Sbjct: 1296 PGQPGLPGLKGDQGPPGIQGNPGRP------------GLNGMKGDPGLPGVPGFPGMKGP 1343
Query: 278 NGLPGTS 298
+G+PG++
Sbjct: 1344 SGVPGSA 1350
Score = 39.3 bits (90), Expect = 0.015
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMG---- 265
PG PGLNG+ G G G+PGL G G G+ GP G
Sbjct: 1317 PGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGDPGLVGPPGPPGLPGPSGQSII 1376
Query: 266 LKGANGLPG 292
+KG G PG
Sbjct: 1377 IKGDVGPPG 1385
Score = 38.9 bits (89), Expect = 0.019
Identities = 28/94 (29%), Positives = 35/94 (37%), Gaps = 3/94 (3%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG+ G+ G+ GS G PG++G G G+ GP+G G
Sbjct: 146 PGPPGIPGMKGEPGS------IIMSSLPGPKGNPGYPGPPGIQGPAGPTGLPGPIGPPGP 199
Query: 278 NGL---PGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
GL PG KGEKG G
Sbjct: 200 PGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQG 233
Score = 38.5 bits (88), Expect = 0.025
Identities = 48/194 (24%), Positives = 59/194 (30%), Gaps = 11/194 (5%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGS----SXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIE------- 244
PG PGL G G G S GE G+KG G
Sbjct: 428 PGAPGLRGPPGPPGPHISPSDEICETGPPGPPGSPGDRGLQGEQGVKGDKGDTCFNCIGT 487
Query: 245 GIDGPMGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXX 424
G+ GP G G GLPG +KGEKG++G
Sbjct: 488 GVSGPRGQPGLPGLPG--------PPGSLGFPGQKGEKGHAGLTGPKGLTGIPGAPGPPG 539
Query: 425 XXXXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGD 604
G G + ++G KGE+G+ G
Sbjct: 540 FPGS-----KGEPGDV--------LTFPGMKGDKGELGYPGAPGLPGLP---------GT 577
Query: 605 MGQDGIPGKPGVKG 646
GQDG+PG PG KG
Sbjct: 578 PGQDGLPGLPGPKG 591
Score = 37.7 bits (86), Expect = 0.042
Identities = 27/95 (28%), Positives = 34/95 (35%), Gaps = 4/95 (4%)
Frame = +2
Query: 98 PGEPGLNGLAGQNG----SSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMG 265
PGEPG +G GQ G + G PGL G G G G G
Sbjct: 321 PGEPGRDGEKGQKGDIGSTGPPGLVIPRPGTGVTVGEKGNMGLPGLPGEKGERGFPGIQG 380
Query: 266 LKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G G PGT++ +KG++G G
Sbjct: 381 PPGLPGPPGTAVMGPPGPPGFPGERGQKGDEGPPG 415
Score = 37.7 bits (86), Expect = 0.042
Identities = 43/186 (23%), Positives = 54/186 (29%), Gaps = 6/186 (3%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEG------IDGP 259
PG GL+GL G G G PGL G IG++G I GP
Sbjct: 786 PGRTGLDGLPGPKGD------------VGPKGQPGPMGPPGLPG-IGVQGPPGPPGIPGP 832
Query: 260 MGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXX 439
+G G +G+PG E+G G GA
Sbjct: 833 VGEPGLHGIPGEKGDPGPPGFDVLGPPGERGSPGIPGAPGPMGPPGTPGLPGKAGASGFP 892
Query: 440 XXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDG 619
G G + I G G G + E G G+ G
Sbjct: 893 -----GAKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDNGLQGQPGPPGPEGEKGGKGEPG 947
Query: 620 IPGKPG 637
+PG PG
Sbjct: 948 LPGPPG 953
Score = 37.7 bits (86), Expect = 0.042
Identities = 24/65 (36%), Positives = 26/65 (40%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+PGL GL G G G PG G G+ G DG G KG
Sbjct: 1387 PGQPGLKGLPGLPGPQGLPGPI---------------GPPGDPGRNGLPGFDGAGGRKGD 1431
Query: 278 NGLPG 292
GLPG
Sbjct: 1432 PGLPG 1436
Score = 37.0 bits (84), Expect = 0.072
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG G G GQ G G PGL G G +G GP G+ G
Sbjct: 65 PGPEGPPGPRGQKGDDGIRGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGC 124
Query: 278 NGLPG 292
NG G
Sbjct: 125 NGTKG 129
Score = 37.0 bits (84), Expect = 0.072
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGL G+ G +G+ G PG G G+EG GP G+ G
Sbjct: 101 PGTPGLPGMPGHDGAPGPQGIPGCNGTKGER------GFPGSPGFPGLEGPPGPPGIPGM 154
Query: 278 NGLPGT 295
G PG+
Sbjct: 155 KGEPGS 160
Score = 36.6 bits (83), Expect = 0.095
Identities = 22/65 (33%), Positives = 25/65 (38%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGL G G G G PGL G G++G+ GP G G
Sbjct: 759 PGPPGLPGFKGTLGPKGDRGFP---------------GPPGLPGRTGLDGLPGPKGDVGP 803
Query: 278 NGLPG 292
G PG
Sbjct: 804 KGQPG 808
Score = 36.2 bits (82), Expect = 0.12
Identities = 24/65 (36%), Positives = 27/65 (41%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGL G +GQ+ G PGL G G+ G GP G G
Sbjct: 1362 PGPPGLPGPSGQS-----IIIKGDVGPPGIPGQPGLKGLPGLPGPQGLPGPIGPPGDPGR 1416
Query: 278 NGLPG 292
NGLPG
Sbjct: 1417 NGLPG 1421
Score = 34.7 bits (78), Expect = 0.36
Identities = 22/64 (34%), Positives = 24/64 (37%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PGL G G G G G KG GI G GP G++G
Sbjct: 57 GHPGLPGFPGPEGPP---------------------GPRGQKGDDGIRGPPGPKGIRGPP 95
Query: 281 GLPG 292
GLPG
Sbjct: 96 GLPG 99
Score = 33.5 bits (75), Expect = 0.80
Identities = 20/65 (30%), Positives = 25/65 (38%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G G G G+PGL G ++G GP G++G
Sbjct: 1260 PGRPGPTGFQGLPGPEGPRGLPGNGGIKGERGNPGQPGQPGLPG---LKGDQGPPGIQGN 1316
Query: 278 NGLPG 292
G PG
Sbjct: 1317 PGRPG 1321
Score = 33.1 bits (74), Expect = 1.0
Identities = 44/192 (22%), Positives = 52/192 (27%), Gaps = 9/192 (4%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGE----PGLKGSIGIEGIDGPMG 265
PG+ G G AG G G+ PG+KG G G G G
Sbjct: 511 PGQKGEKGHAGLTGPKGLTGIPGAPGPPGFPGSKGEPGDVLTFPGMKGDKGELGYPGAPG 570
Query: 266 LKGANGLPG----TSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXX 433
L G G PG L E+G GN G
Sbjct: 571 LPGLPGTPGQDGLPGLPGPKGEPGGIAFKGERGPPGNPGLPGLPGNRGPMGPVGFGPPGP 630
Query: 434 XXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQ-XXXXXXXXXXXXXXXXEVGDMG 610
+ G G I G KG+ G EVG G
Sbjct: 631 VGEKGIQGVAGN---------PGQPGIPGPKGDPGQTITQPGKPGLPGNPGRHGEVGLPG 681
Query: 611 QDGIPGKPGVKG 646
G+PG PG+ G
Sbjct: 682 DPGLPGPPGLPG 693
Score = 32.7 bits (73), Expect = 1.4
Identities = 26/90 (28%), Positives = 30/90 (33%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GEPG G G G G PG G G +G+ GP +G
Sbjct: 1223 GEPGFQGFPGVQGPPGPPGSPGPALEGPKGNPGPQ-GPPGRPGPTGFQGLPGP---EGPR 1278
Query: 281 GLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
GLPG KGE+GN G
Sbjct: 1279 GLPGNG--------------GIKGERGNPG 1294
Score = 31.6 bits (70), Expect = 3.0
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+PG+ G G G + G PG G +G+ G G G G
Sbjct: 643 PGQPGIPGPKGDPGQTITQPGKPGLP-----------GNPGRHGEVGLPGDPGLPGPPGL 691
Query: 278 NGLPG 292
G+PG
Sbjct: 692 PGIPG 696
Score = 31.2 bits (69), Expect = 4.0
Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 1/92 (1%)
Frame = +2
Query: 98 PGEPG-LNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKG 274
PG PG + G G+ G G+PG G G +G G G G
Sbjct: 278 PGPPGGMKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDIG 337
Query: 275 ANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
+ G PG + GEKGN G
Sbjct: 338 STGPPGLVIPRPGTGVTV-------GEKGNMG 362
Score = 30.0 bits (66), Expect = 8.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 599 GDMGQDGIPGKPGVKG 646
GD+G GIPG+PG+KG
Sbjct: 1379 GDVGPPGIPGQPGLKG 1394
>sp|P27393|CO4A2_ASCSU Collagen alpha 2(IV) chain precursor
Length = 1763
Score = 51.2 bits (121), Expect = 4e-06
Identities = 50/190 (26%), Positives = 58/190 (30%), Gaps = 7/190 (3%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDG---PMGL 268
PGE GL+GL GQ G + G PGLKG G+ G++G P G+
Sbjct: 1174 PGERGLDGLPGQKGEAGFPGAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGM 1233
Query: 269 KGANGLPGT----SLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXX 436
KG GLPG L G+ G S
Sbjct: 1234 KGEAGLPGAPGRDGLPGLPGMKGEAGLPGLPGQPGKSITGPKGNAGLPGLPGKDGLPGLP 1293
Query: 437 XXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQD 616
G G I G+KGE G G G D
Sbjct: 1294 GLKGEPGKPGYAGAAGIKGEPGLPGIPGAKGEPGLSGIP---------------GKRGND 1338
Query: 617 GIPGKPGVKG 646
GIPGKPG G
Sbjct: 1339 GIPGKPGPAG 1348
Score = 45.8 bits (107), Expect = 2e-04
Identities = 26/64 (40%), Positives = 29/64 (45%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PGL+GL G +G G PGL G GIEGI GP GL G +
Sbjct: 1461 GLPGLDGLPGPSGPPGFAGAKGRDGFPGQPGMPGEKGAPGLPGFPGIEGIPGPPGLPGPS 1520
Query: 281 GLPG 292
G PG
Sbjct: 1521 GPPG 1524
Score = 45.1 bits (105), Expect = 3e-04
Identities = 49/186 (26%), Positives = 55/186 (29%), Gaps = 3/186 (1%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTG---EPGLKGSIGIEGIDGPMGL 268
PG PGL GL GQ G G EPGL G G EG GP G
Sbjct: 842 PGAPGLPGLEGQRGLPGVPGQKGEIGLPGLAGAPGFPGAKGEPGLPGLPGKEGPQGPPGQ 901
Query: 269 KGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXT 448
GA G PG G KG++G
Sbjct: 902 PGAPGFPGQK-----GDEGLPGLPGVSGMKGDTGLPGVPGLAGPPGQPGFPGQ------- 949
Query: 449 VNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPG 628
G G + G+ G+ G Q G GQDG+PG
Sbjct: 950 -KGQPGFPGVAGAKGEAGLPGLPGAPGQKGEQGLAGLPGIPGMKGAPGIPGAPGQDGLPG 1008
Query: 629 KPGVKG 646
PGVKG
Sbjct: 1009 LPGVKG 1014
Score = 44.3 bits (103), Expect = 5e-04
Identities = 48/183 (26%), Positives = 56/183 (30%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+ GL GL GQ G S G PGL G +G GI G G G
Sbjct: 1123 PGQDGLPGLPGQKGESGFPGQPGL------------VGPPGLPGKMGAPGIRGEKGDAGL 1170
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
GLPG +KGE G GA + G
Sbjct: 1171 PGLPG--------ERGLDGLPGQKGEAGFPGAPG-----------------------LPG 1199
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
+G G KGE G G G+DG+PG PG
Sbjct: 1200 PVG------PKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGEAGLPGAPGRDGLPGLPG 1253
Query: 638 VKG 646
+KG
Sbjct: 1254 MKG 1256
Score = 43.9 bits (102), Expect = 6e-04
Identities = 48/183 (26%), Positives = 52/183 (28%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+ GL GL G G GEPGL G G+ G GP GL G
Sbjct: 1001 PGQDGLPGLPGVKGDRGFNGLPGEKGEPGPAARDGEKGEPGLPGQPGLRGPQGPPGLPGL 1060
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
GL G GEKG G + G
Sbjct: 1061 PGLKGDE------GQPGYGAPGLMGEKGLPG--------------------------LPG 1088
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
GR G KGE G G GQDG+PG PG
Sbjct: 1089 KPGRPGAPGPKGLDGAPGFPGLKGEAGLPGAP---------------GLPGQDGLPGLPG 1133
Query: 638 VKG 646
KG
Sbjct: 1134 QKG 1136
Score = 43.1 bits (100), Expect = 0.001
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PG GL G+ G G PGL G G+EG+ GP G KG +
Sbjct: 367 GPPGPPGLPGREGQPGPPGADGYPGPPGPQGPQGLPGGPGLPGLPGLEGLPGPKGEKGDS 426
Query: 281 GLPG 292
G+PG
Sbjct: 427 GIPG 430
Score = 43.1 bits (100), Expect = 0.001
Identities = 47/206 (22%), Positives = 53/206 (25%), Gaps = 23/206 (11%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGP------ 259
PG PGL GL G G G PG KG G G+DG
Sbjct: 405 PGLPGLPGLEGLPGPKGEKGDSGIPGAPGVQGPPGLAGPPGAKGEPGPRGVDGQSIPGLP 464
Query: 260 -----------------MGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXX 388
MGL G G PG SL KG G GA
Sbjct: 465 GKDGRPGLDGLPGRKGEMGLPGVRGPPGDSLNGLPGPPGPRGPQGPKGYDGRDGAPG--- 521
Query: 389 XXXXXXXXXXXXXXXXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXX 568
+ G G +G KG+ G+
Sbjct: 522 --------------------LPGIPGPKGDRGGTCAFCAHGAKGEKGDAGYAGLPGPQGE 561
Query: 569 XXXXXXXXEVGDMGQDGIPGKPGVKG 646
G G DG+PG PG G
Sbjct: 562 RGLPGIPGATGAPGDDGLPGAPGRPG 587
Score = 42.0 bits (97), Expect = 0.002
Identities = 47/193 (24%), Positives = 56/193 (29%), Gaps = 10/193 (5%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPM----- 262
PG PG+ G G+ G S G PG+KG G+ G GP
Sbjct: 1314 PGLPGIPGAKGEPGLSGIPGKRGNDGIPGKPGPAGLPGLPGMKGESGLPGPQGPAGLPGL 1373
Query: 263 -GLKGANGLPG----TSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXX 427
GLKG GLPG KG+ G GA
Sbjct: 1374 PGLKGEPGLPGFPGQKGETGFPGQPGIPGLPGMKGDSGYPGAPGRDGAPGKQGEPGPMGP 1433
Query: 428 XXXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDM 607
G G + IRG KG G G
Sbjct: 1434 PGAQPIVQRGEKGEM------GPMGAPGIRGEKGLPGLDGLPGPSGPPGF------AGAK 1481
Query: 608 GQDGIPGKPGVKG 646
G+DG PG+PG+ G
Sbjct: 1482 GRDGFPGQPGMPG 1494
Score = 41.6 bits (96), Expect = 0.003
Identities = 26/65 (40%), Positives = 29/65 (44%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+PGL G G+ G S G PGLKG GI G G GL+G
Sbjct: 807 PGQPGLPGPKGEPGPSTTGPPGPP-------------GFPGLKGKDGIPGAPGLPGLEGQ 853
Query: 278 NGLPG 292
GLPG
Sbjct: 854 RGLPG 858
Score = 41.2 bits (95), Expect = 0.004
Identities = 44/186 (23%), Positives = 52/186 (27%), Gaps = 3/186 (1%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGS---IGIEGIDGPMGL 268
PG+ GL GL G G + G PGL G+ G+ GI G G+
Sbjct: 729 PGKDGLPGLPGPKGEAGFPGAPGLQGPAGLPGLPGMKGNPGLPGAPGLAGLPGIPGEKGI 788
Query: 269 KGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXT 448
G GLPG L G KG G
Sbjct: 789 AGKPGLPG--LTGAKGEAGYPGQPGLPGPKGEPGPSTTGPPGPPGFPGLKGKDGIPGAPG 846
Query: 449 VNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPG 628
+ G G+ + G G GF G GQ G PG
Sbjct: 847 LPGLEGQRGLPGVPGQKGEIGLPGLAGAPGFPGAKGEPGLPGLPGKEGPQGPPGQPGAPG 906
Query: 629 KPGVKG 646
PG KG
Sbjct: 907 FPGQKG 912
Score = 38.1 bits (87), Expect = 0.033
Identities = 24/65 (36%), Positives = 27/65 (41%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+ GL GL GQ G GE G G G EG+ G G+ GA
Sbjct: 592 PGQDGLPGLPGQKGEPTQLTLRPGPPGYPGQK-----GETGFPGPRGQEGLPGKPGIVGA 646
Query: 278 NGLPG 292
GLPG
Sbjct: 647 PGLPG 651
Score = 37.4 bits (85), Expect = 0.055
Identities = 44/182 (24%), Positives = 52/182 (28%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G+PGL G+ G+ G S G PGL G G +G G GL G
Sbjct: 285 GQPGLPGMKGEKGLSGPAGPRGKE------------GRPGLPGPPGFKGDRGLDGLPGVP 332
Query: 281 GLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNGT 460
GLPG +KGE G G G
Sbjct: 333 GLPG-----------------QKGEAGFPGRDGAKGARGPPGPPGGGEFSDGPPGP-PGL 374
Query: 461 IGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPGV 640
GR G +G G G+ G GIPG PGV
Sbjct: 375 PGREGQPGPPGADGYPGPPGPQGPQGLPGGPGLPGLPGLEGLPGPKGEKGDSGIPGAPGV 434
Query: 641 KG 646
+G
Sbjct: 435 QG 436
Score = 35.8 bits (81), Expect = 0.16
Identities = 45/187 (24%), Positives = 54/187 (28%), Gaps = 4/187 (2%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKG--SIGIEGIDGPMGLK 271
PG PGL G G++G G PG G SIG +G G G +
Sbjct: 176 PGMPGLPGPPGRDGFPGEKGDRGDVGQAGPRGPPGEAGPPGNPGIGSIGPKGDPGEQGPR 235
Query: 272 GANGLPG--TSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXX 445
G G PG S KGEKG+ G
Sbjct: 236 GPQGPPGPVPSTGAKGTIIGPEGAPGMKGEKGDPGEA----------------------- 272
Query: 446 TVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIP 625
G G ++G KG G GD G DG+P
Sbjct: 273 ---GPRGFPGTPGVAGQPGLPGMKGEKGLSGPAGPRGKEGRPGLPGPPGFKGDRGLDGLP 329
Query: 626 GKPGVKG 646
G PG+ G
Sbjct: 330 GVPGLPG 336
Score = 35.8 bits (81), Expect = 0.16
Identities = 41/183 (22%), Positives = 49/183 (26%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G G+ G G PG KG G+ G+ G G
Sbjct: 614 PGPPGYPGQKGETGFPGPRGQEGLPGKPGIVGAPGLPGPPGPKGEPGLTGLPEKPGKDGI 673
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
GLPG KG+ G G +G
Sbjct: 674 PGLPGLKGEPGYGQPGMPGLPGMKGDAGLPGLPGLPGAVGPMGPPVPESQLRPGPPGKDG 733
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
G + G KGE GF G G G+PG PG
Sbjct: 734 LPG---------------LPGPKGEAGFPGAP---------------GLQGPAGLPGLPG 763
Query: 638 VKG 646
+KG
Sbjct: 764 MKG 766
Score = 35.4 bits (80), Expect = 0.21
Identities = 24/65 (36%), Positives = 26/65 (40%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG GL G GQ GS G G+KG GI G+ G G GA
Sbjct: 66 PGPEGLPGPKGQKGSQGPP------------------GPQGIKGDRGIIGVPGFPGNDGA 107
Query: 278 NGLPG 292
NG PG
Sbjct: 108 NGRPG 112
Score = 33.9 bits (76), Expect = 0.61
Identities = 25/90 (27%), Positives = 29/90 (32%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PG G G NG G PGL G G+ G GP G+ G
Sbjct: 97 GVPGFPGNDGANGRPGEPGPPGAPGWDGCNGTDGAPGVPGLPGPPGMPGFPGPPGVPGMK 156
Query: 281 GLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G P GEKG++G
Sbjct: 157 GEPAIG------------YAGAPGEKGDAG 174
Score = 33.5 bits (75), Expect = 0.80
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +2
Query: 218 GLKGSIGIEGIDGPMGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G KGS+GI G GP G +G G PG KG+KG+ G
Sbjct: 43 GEKGSMGIPGPQGPPGAQGIRGFPGPE-----------GLPGPKGQKGSQG 82
Score = 33.1 bits (74), Expect = 1.0
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 209 GEPGLKGSIGIEGIDGPMGLKGANGLPG 292
G G++G G EG+ GP G KG+ G PG
Sbjct: 58 GAQGIRGFPGPEGLPGPKGQKGSQGPPG 85
Score = 33.1 bits (74), Expect = 1.0
Identities = 25/91 (27%), Positives = 32/91 (35%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG+ G G G G PG KG G+ G+ G G G
Sbjct: 138 PGPPGMPGFPGPPG----------VPGMKGEPAIGYAGAPGEKGDAGMPGMPGLPGPPGR 187
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
+G PG EKG++G+ G
Sbjct: 188 DGFPG-----------------EKGDRGDVG 201
Score = 32.7 bits (73), Expect = 1.4
Identities = 30/101 (29%), Positives = 34/101 (33%), Gaps = 10/101 (9%)
Frame = +2
Query: 98 PGEPGLNGLAGQNG----SSXXXXXXXXXXXXXXXXXXXXTGEPGL------KGSIGIEG 247
PG PGL G G+ G G PGL G G +G
Sbjct: 329 PGVPGLPGQKGEAGFPGRDGAKGARGPPGPPGGGEFSDGPPGPPGLPGREGQPGPPGADG 388
Query: 248 IDGPMGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
GP G +G GLPG KGEKG+SG
Sbjct: 389 YPGPPGPQGPQGLPGG--PGLPGLPGLEGLPGPKGEKGDSG 427
Score = 31.2 bits (69), Expect = 4.0
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G+ G G G G GEPG G+ G +G +G G G
Sbjct: 76 GQKGSQGPPGPQGIKGDRGIIGVPGFPGNDGANGRPGEPGPPGAPGWDGCNGTDGAPGVP 135
Query: 281 GLPG 292
GLPG
Sbjct: 136 GLPG 139
Score = 30.4 bits (67), Expect = 6.8
Identities = 21/64 (32%), Positives = 25/64 (39%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GE GL G+ G G+ G+ GL G+ G G GP G G
Sbjct: 560 GERGLPGIPGATGAP---------------------GDDGLPGAPGRPGPPGPPGQDGLP 598
Query: 281 GLPG 292
GLPG
Sbjct: 599 GLPG 602
>sp|P02462|CO4A1_HUMAN Collagen alpha 1(IV) chain precursor
Length = 1669
Score = 50.1 bits (118), Expect = 8e-06
Identities = 47/187 (25%), Positives = 58/187 (31%), Gaps = 4/187 (2%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG +G AGQ G G+PG+ G+ G G+ GP G G
Sbjct: 974 PGVPGKDGQAGQPGQPGPK------------------GDPGISGTPGAPGLPGPKGSVGG 1015
Query: 278 NGLPGT----SLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXX 445
GLPGT + +KG KG G
Sbjct: 1016 MGLPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAGFP 1075
Query: 446 TVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIP 625
G G ++GS G VG+ E GD G G+
Sbjct: 1076 GSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGY---------PGSPGLPGEKGDKGLPGLD 1126
Query: 626 GKPGVKG 646
G PGVKG
Sbjct: 1127 GIPGVKG 1133
Score = 49.3 bits (116), Expect = 1e-05
Identities = 49/180 (27%), Positives = 57/180 (31%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG GL G GS G PG KG G+ G+DG G+KG
Sbjct: 1090 PGMPGSPGLKGSPGS---------------VGYPGSPGLPGEKGDKGLPGLDGIPGVKGE 1134
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
GLPGT +KGE G+ G G
Sbjct: 1135 AGLPGT--------PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKG 1186
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
+ G + I GSKGE GF G GQ G+PG PG
Sbjct: 1187 SKGEV---GFPGLAGSPGIPGSKGEQGFMGPP---------------GPQGQPGLPGSPG 1228
Score = 41.2 bits (95), Expect = 0.004
Identities = 25/65 (38%), Positives = 28/65 (43%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG NGL G G G PGLKG G+ GI G G KG+
Sbjct: 713 PGRPGFNGLPGNPGVQGQKGEPG-------------VGLPGLKGLPGLPGIPGTPGEKGS 759
Query: 278 NGLPG 292
G+PG
Sbjct: 760 IGVPG 764
Score = 40.0 bits (92), Expect = 0.009
Identities = 45/183 (24%), Positives = 54/183 (29%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+PG G G++G GEPG G IG +G G G G
Sbjct: 280 PGKPGPRGKPGKDGDK------------GEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGP 327
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G PG + EKGE+G G V G
Sbjct: 328 PGPPGIVI--------GTGPLGEKGERGYPGTPGPRGEPGPKGFPGLPGQPGPPGLPVPG 379
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
G RG KG+ GF G G+DG+PG PG
Sbjct: 380 QAG---------APGFPGERGEKGDRGFPGTSLP-------------GPSGRDGLPGPPG 417
Query: 638 VKG 646
G
Sbjct: 418 SPG 420
Score = 39.3 bits (90), Expect = 0.015
Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPG----LKGSIGIEGIDGPMG 265
PG PG G G G G PG +KG G+ G +GP G
Sbjct: 1310 PGVPGFQGPKGLPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPPG 1369
Query: 266 LKGANGLPG 292
LKG GLPG
Sbjct: 1370 LKGLQGLPG 1378
Score = 38.5 bits (88), Expect = 0.025
Identities = 26/93 (27%), Positives = 32/93 (34%), Gaps = 2/93 (2%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGS--SXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLK 271
PG PG GL G+ G+ G PG G G G+ G G++
Sbjct: 669 PGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNGLPGNPGVQ 728
Query: 272 GANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G G PG L GEKG+ G
Sbjct: 729 GQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIG 761
Score = 37.7 bits (86), Expect = 0.042
Identities = 45/187 (24%), Positives = 56/187 (29%), Gaps = 4/187 (2%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXT----GEPGLKGSIGIEGIDGPMG 265
PG PGL G+ G G T G PGL+G +G G GP G
Sbjct: 147 PGPPGLPGMKGDPGEILGHVPGMLLKGERGFPGIPGTPGPPGLPGLQGPVGPPGFTGPPG 206
Query: 266 LKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXX 445
G G PG KG+KG+ G
Sbjct: 207 PPGPPGPPGEK------GQMGLSFQGPKGDKGDQGVSGPP-------------------- 240
Query: 446 TVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIP 625
G G+ +G KGE GFQ + +G+ G P
Sbjct: 241 ---GVPGQAQVQEKGDFATKGE-KGQKGEPGFQG----------------MPGVGEKGEP 280
Query: 626 GKPGVKG 646
GKPG +G
Sbjct: 281 GKPGPRG 287
Score = 37.0 bits (84), Expect = 0.072
Identities = 42/192 (21%), Positives = 54/192 (28%), Gaps = 9/192 (4%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXT-------GEPGLKGSIGIEGIDG 256
PG+PG G G+ G G+PG KG G+ G DG
Sbjct: 448 PGQPGFIGEIGEKGQKGESCLICDIDGYRGPPGPQGPPGEIGFPGQPGAKGDRGLPGRDG 507
Query: 257 PMGLKGANGLPGT--SLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXX 430
G+ G G PG KG+KG+ G
Sbjct: 508 VAGVPGPQGTPGLIGQPGAKGEPGEFYFDLRLKGDKGDPGFPGQPGMPGRAGSPGRDGHP 567
Query: 431 XXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMG 610
G+ G + GS+G+ G +GD G
Sbjct: 568 GLPGP--KGSPGSVGLKGERGPPGGVGFPGSRGDTG-------PPGPPGYGPAGPIGDKG 618
Query: 611 QDGIPGKPGVKG 646
Q G PG PG G
Sbjct: 619 QAGFPGGPGSPG 630
Score = 37.0 bits (84), Expect = 0.072
Identities = 45/206 (21%), Positives = 55/206 (26%), Gaps = 23/206 (11%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPG---LKGSIGIEGI------ 250
PG PG+ G G+ GS GEPG L GS+G G+
Sbjct: 745 PGLPGIPGTPGEKGSIGVPGVPGEHGAIGPPGLQGIRGEPGPPGLPGSVGSPGVPGIGPP 804
Query: 251 --------------DGPMGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXX 388
GP G+KG G PG KG+KG G
Sbjct: 805 GARGPPGGQGPPGLSGPPGIKGEKGFPG---------FPGLDMPGPKGDKGAQGLPG--- 852
Query: 389 XXXXXXXXXXXXXXXXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXX 568
+ G G GSKGE+G
Sbjct: 853 --------------------ITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGS 892
Query: 569 XXXXXXXXEVGDMGQDGIPGKPGVKG 646
G+ G G PG G +G
Sbjct: 893 PGPVGAPGLPGEKGDHGFPGSSGPRG 918
Score = 36.2 bits (82), Expect = 0.12
Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGL---K 271
G PGL GL G G G PG KG +G G GP G
Sbjct: 1366 GPPGLKGLQGLPGPKGQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPP 1425
Query: 272 GANGLPGT 295
G +GLPG+
Sbjct: 1426 GPDGLPGS 1433
Score = 35.8 bits (81), Expect = 0.16
Identities = 22/64 (34%), Positives = 24/64 (37%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G+ G GL G G TGEPGL G+ G G G G G
Sbjct: 46 GQKGERGLPGLQGVIGFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNP 105
Query: 281 GLPG 292
GLPG
Sbjct: 106 GLPG 109
Score = 35.8 bits (81), Expect = 0.16
Identities = 47/187 (25%), Positives = 54/187 (28%), Gaps = 5/187 (2%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGI-----EGIDGPMG 265
GE G GLAG G G+PGL GS G +G GP G
Sbjct: 1189 GEVGFPGLAGSPG------IPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQG 1242
Query: 266 LKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXX 445
G GLPG KG+KGN G
Sbjct: 1243 QPGLPGLPG-----PMGPPGLPGIDGVKGDKGNPG--------------------WPGAP 1277
Query: 446 TVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIP 625
V G G I GSKG++G GD G G+P
Sbjct: 1278 GVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKGLPGLQGIKGDQGDQGVP 1337
Query: 626 GKPGVKG 646
G G+ G
Sbjct: 1338 GAKGLPG 1344
Score = 35.4 bits (80), Expect = 0.21
Identities = 46/185 (24%), Positives = 55/185 (29%), Gaps = 2/185 (1%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+PG+ G AG G G PG KGS G G+ G G G
Sbjct: 549 PGQPGMPGRAGSPGRDGHP------------------GLPGPKGSPGSVGLKGERGPPGG 590
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G PG+ G+KG +G G
Sbjct: 591 VGFPGSRGDTGPPGPPGYGPAGPIGDKGQAGFPGGPGSPGLPGP--------------KG 636
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGI--PGK 631
G+I + GS G G Q E G +GQ GI PG
Sbjct: 637 EPGKI--VPLPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGP 694
Query: 632 PGVKG 646
PG KG
Sbjct: 695 PGPKG 699
Score = 34.7 bits (78), Expect = 0.36
Identities = 22/65 (33%), Positives = 25/65 (38%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G G G+S G PGL G G +G GP G+ G
Sbjct: 84 PGLPGTKGTRGPPGASGYP------------------GNPGLPGIPGQDGPPGPPGIPGC 125
Query: 278 NGLPG 292
NG G
Sbjct: 126 NGTKG 130
Score = 34.7 bits (78), Expect = 0.36
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGL G+ GQ+G G PG+ G G +G GP+G G
Sbjct: 102 PGNPGLPGIPGQDGPP---------------------GPPGIPGCNGTKGERGPLGPPGL 140
Query: 278 NGLPG 292
G G
Sbjct: 141 PGFAG 145
Score = 34.7 bits (78), Expect = 0.36
Identities = 46/195 (23%), Positives = 56/195 (28%), Gaps = 13/195 (6%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGL------------KGSIGIE 244
G PGL G G +G G+PG KG G +
Sbjct: 897 GAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEK 956
Query: 245 GIDGPMGLKGANGLPGT-SLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXX 421
G GP+G KG+ G PGT + KG+ G SG
Sbjct: 957 GQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGM 1016
Query: 422 XXXXXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVG 601
+ GT G + G KG G + E G
Sbjct: 1017 G--------LPGTPGEKGVPGIPGPQGSPGLPGDKGAKG-EKGQAGPPGIGIPGLRGEKG 1067
Query: 602 DMGQDGIPGKPGVKG 646
D G G PG PG KG
Sbjct: 1068 DQGIAGFPGSPGEKG 1082
Score = 33.9 bits (76), Expect = 0.61
Identities = 21/65 (32%), Positives = 27/65 (41%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG++G+ G G+ G+PG +G GI G G G KG
Sbjct: 1256 PGLPGIDGVKGDKGN---------PGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGD 1306
Query: 278 NGLPG 292
G PG
Sbjct: 1307 MGPPG 1311
Score = 33.1 bits (74), Expect = 1.0
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 9/74 (12%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLK-- 271
PG PG G+ G G G PG+ G G +G+ G G+K
Sbjct: 1271 PGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKGLPGLQGIKGD 1330
Query: 272 -------GANGLPG 292
GA GLPG
Sbjct: 1331 QGDQGVPGAKGLPG 1344
Score = 32.0 bits (71), Expect = 2.3
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 209 GEPGLKGSIGIEGIDGPMGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
GEPG G G G DG G KG+ G PG +GEKG +G
Sbjct: 278 GEPGKPGPRGKPGKDGDKGEKGSPGFPG-----EPGYPGLIGRQGPQGEKGEAG 326
Score = 32.0 bits (71), Expect = 2.3
Identities = 21/64 (32%), Positives = 25/64 (39%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GEPGL G G G G G +G G+ GI GP G+ G +
Sbjct: 1357 GEPGLPGPEGPPGLKGLQGLP---------------GPKGQQGVTGLVGIPGPPGIPGFD 1401
Query: 281 GLPG 292
G PG
Sbjct: 1402 GAPG 1405
Score = 31.6 bits (70), Expect = 3.0
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G G G G PG G+ G +G GP G G
Sbjct: 1359 PGLPGPEGPPGLKGLQGLPGPKGQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGPAGPTGP 1418
Query: 278 NGLPG 292
G PG
Sbjct: 1419 RGFPG 1423
Score = 30.4 bits (67), Expect = 6.8
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 9/38 (23%)
Frame = +2
Query: 209 GEPGLKGSIGIEGIDGPMGLKGAN---------GLPGT 295
G PGL+G IG G+ GP G +G GLPGT
Sbjct: 52 GLPGLQGVIGFPGMQGPEGPQGPPGQKGDTGEPGLPGT 89
>sp|P04258|CA13_BOVIN Collagen alpha 1(III) chain
Length = 1049
Score = 50.1 bits (118), Expect = 8e-06
Identities = 47/188 (25%), Positives = 57/188 (30%), Gaps = 4/188 (2%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG NG+ GQ G++ G PG+ G G +G DG G GA
Sbjct: 260 PGPPGTNGVPGQRGAAGEPGKNGAKGDPGPRGERGEAGSPGIAGPKGEDGKDGSPGEPGA 319
Query: 278 NGLPGTS----LXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXX 445
NGLPG + + EKG G+ G
Sbjct: 320 NGLPGAAGERGVPGFRGPAGANGLPGEKGPPGDRGGPGPAGPRGVAGEPGRNGLPGGP-- 377
Query: 446 TVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIP 625
G G GS+GE G G G DG P
Sbjct: 378 ---GLRGIPGSPGGPGSNGKPGPPGSQGETGRPGPPGSPGPRGQPGVMGFPGPKGNDGAP 434
Query: 626 GKPGVKGG 649
GK G +GG
Sbjct: 435 GKNGERGG 442
Score = 42.7 bits (99), Expect = 0.001
Identities = 23/65 (35%), Positives = 27/65 (41%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PG G+ G+ GS G PG GS G G DGP G G+N
Sbjct: 696 GPPGPQGVKGERGSPGGPGAAGFPGGRGPPGPPGSNGNPGPPGSSGAPGKDGPPGPPGSN 755
Query: 281 GLPGT 295
G PG+
Sbjct: 756 GAPGS 760
Score = 41.6 bits (96), Expect = 0.003
Identities = 31/92 (33%), Positives = 36/92 (39%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G AG+NG + G PG G G +G GP G +G
Sbjct: 443 PGGPGPQGPAGKNGETGPQ------------------GPPGPTGPSGDKGDTGPPGPQGL 484
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGA 373
GLPGTS E G KG +GA
Sbjct: 485 QGLPGTS-----GPPGENGKPGEPGPKGEAGA 511
Score = 41.2 bits (95), Expect = 0.004
Identities = 44/183 (24%), Positives = 48/183 (26%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G G G GE G G G G GP G+KG
Sbjct: 38 PGAPGAPGYQGPPGEPGQAGPAGPPGPPGAIGPSGKDGESGRPGRPGPRGFPGPPGMKGP 97
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G+PG GEKG GA G
Sbjct: 98 AGMPG-----FPGMKGHRGFDGRNGEKGEPGAPGLKGENGVPGEDGAPGPMGPRG--APG 150
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
GR RGS G+ G EVG G G G PG
Sbjct: 151 ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSSGAPG 210
Query: 638 VKG 646
+G
Sbjct: 211 QRG 213
Score = 40.0 bits (92), Expect = 0.009
Identities = 42/183 (22%), Positives = 52/183 (28%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG NG G G S G PG G +GI G+ G GL G
Sbjct: 749 PGPPGSNGAPGSPGISGPKGDSGPPGERGAPGPQ---GPPGAPGPLGIAGLTGARGLAGP 805
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G+PG +G KG +G G
Sbjct: 806 PGMPGA-----------RGSPGPQGIKGENGKP--------------------------G 828
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
G+ + G+ GE G GD G++G PG PG
Sbjct: 829 PSGQNGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGAPGAKGDRGENGSPGAPG 888
Query: 638 VKG 646
G
Sbjct: 889 APG 891
Score = 38.9 bits (89), Expect = 0.019
Identities = 43/186 (23%), Positives = 50/186 (26%), Gaps = 4/186 (2%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PGL G AG G+ G PG KG +G G G G G
Sbjct: 153 GRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSSGAPGQR 212
Query: 281 GLPG----TSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXT 448
G PG KGE G +G
Sbjct: 213 GEPGPQGHAGAPGPPGPPGSDGSPGGKGEMGPAGIPGAPGLIGARGPPGPPGTNG----- 267
Query: 449 VNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPG 628
V G G RG +GE G G+ G+DG PG
Sbjct: 268 VPGQRGAAGEPGKNGAKGDPGPRGERGEAG------------SPGIAGPKGEDGKDGSPG 315
Query: 629 KPGVKG 646
+PG G
Sbjct: 316 EPGANG 321
Score = 37.7 bits (86), Expect = 0.042
Identities = 28/91 (30%), Positives = 33/91 (36%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PGL G+ G+ G GEPG G G G DGP G G
Sbjct: 564 GTPGLQGMPGERGGPGGPGPKGDK------------GEPGSSGVDGAPGKDGPRGPTGPI 611
Query: 281 GLPGTSLXXXXXXXXXXXXXXEKGEKGNSGA 373
G PG + + G+KG SGA
Sbjct: 612 GPPGPA--------------GQPGDKGESGA 628
Score = 35.4 bits (80), Expect = 0.21
Identities = 25/68 (36%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +2
Query: 98 PGEPGLN---GLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGL 268
PG PG G AG GSS G PG GS G +G GP G+
Sbjct: 188 PGSPGAKGEVGPAGSPGSSGAPGQRGEPGPQGHAGAPGPPGPPGSDGSPGGKGEMGPAGI 247
Query: 269 KGANGLPG 292
GA GL G
Sbjct: 248 PGAPGLIG 255
Score = 35.0 bits (79), Expect = 0.28
Identities = 21/65 (32%), Positives = 25/65 (38%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G AG++G G G +G G G G MG+KG
Sbjct: 893 PGPPGPVGPAGKSGDRGETGPAGPSGAPGPAGSRGPPGPQGPRGDKGETGERGAMGIKGH 952
Query: 278 NGLPG 292
G PG
Sbjct: 953 RGFPG 957
Score = 33.5 bits (75), Expect = 0.80
Identities = 24/65 (36%), Positives = 25/65 (38%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG NG G GSS G PG GS G G G G KG
Sbjct: 725 PGPPGSNGNPGPPGSSGAPGKD---------------GPPGPPGSNGAPGSPGISGPKGD 769
Query: 278 NGLPG 292
+G PG
Sbjct: 770 SGPPG 774
Score = 32.3 bits (72), Expect = 1.8
Identities = 26/92 (28%), Positives = 32/92 (34%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G AG G+ G PG G G G GP G GA
Sbjct: 959 PGAPGSPGPAGHQGA---------------------VGSPGPAGPRGPVGPSGPPGKDGA 997
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGA 373
+G PG +GE+G+ G+
Sbjct: 998 SGHPG--------PIGPPGPRGNRGERGSEGS 1021
Score = 32.0 bits (71), Expect = 2.3
Identities = 40/182 (21%), Positives = 52/182 (28%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G+ G G G G+ G PG GS G G+ G G +G
Sbjct: 519 GDSGAPGERGPPGAGGPPGPRGGAGPPGPEGGKGAAGPPGPPGSAGTPGLQGMPGERGGP 578
Query: 281 GLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNGT 460
G PG +KGE G+SG V+G
Sbjct: 579 GGPGPK--------------GDKGEPGSSG--------------------------VDGA 598
Query: 461 IGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPGV 640
G+ RG G +G + GD G+ G PG PG+
Sbjct: 599 PGK------------DGPRGPTGPIG------------PPGPAGQPGDKGESGAPGVPGI 634
Query: 641 KG 646
G
Sbjct: 635 AG 636
Score = 32.0 bits (71), Expect = 2.3
Identities = 23/85 (27%), Positives = 26/85 (30%), Gaps = 21/85 (24%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDG-------- 256
G PG+ G+AG G GEPG KG G G G
Sbjct: 627 GAPGVPGIAGPRGGPGERGEQGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPGAA 686
Query: 257 -------------PMGLKGANGLPG 292
P G+KG G PG
Sbjct: 687 GPAGGSGPAGPPGPQGVKGERGSPG 711
Score = 31.6 bits (70), Expect = 3.0
Identities = 38/183 (20%), Positives = 51/183 (27%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+ G G G G+ G PG G IG G GP G G
Sbjct: 209 PGQRGEPGPQGHAGAPGPPGPPGSDGSPGGKGEMGPAGIPGAPGLIGARGPPGPPGTNGV 268
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G G + +GE+G +G+ NG
Sbjct: 269 PGQRGAA--GEPGKNGAKGDPGPRGERGEAGSPGIAGPKGEDGKDGSPGEPG-----ANG 321
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
G G GE G G+ G++G+PG PG
Sbjct: 322 LPGAAGERGVPGFRGPAGANGLPGEKG---PPGDRGGPGPAGPRGVAGEPGRNGLPGGPG 378
Query: 638 VKG 646
++G
Sbjct: 379 LRG 381
Score = 31.6 bits (70), Expect = 3.0
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG GL GL G +G G PG+ G G G G G GA
Sbjct: 479 PGPQGLQGLPGTSGPPGENGKPGEPGPKGE------AGAPGIPGGKGDSGAPGERGPPGA 532
Query: 278 NGLPG 292
G PG
Sbjct: 533 GGPPG 537
Score = 31.2 bits (69), Expect = 4.0
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G G+ G G PG G G G GP G G
Sbjct: 395 PGPPGSQGETGRPGPPGSPGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPAGK 454
Query: 278 NGLPG 292
NG G
Sbjct: 455 NGETG 459
Score = 30.4 bits (67), Expect = 6.8
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G G+ GSS G G G G G G G+ G
Sbjct: 578 PGGPGPKGDKGEPGSSGVDGAPGKDGPRGPTGPIGPPGPAGQPGDKGESGAPGVPGIAGP 637
Query: 278 NGLPG 292
G PG
Sbjct: 638 RGGPG 642
>sp|P02463|CO4A1_MOUSE Collagen alpha 1(IV) chain precursor
Length = 1669
Score = 49.7 bits (117), Expect = 1e-05
Identities = 48/183 (26%), Positives = 56/183 (30%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G G G+ G PG KG G+ G+DG G+KG
Sbjct: 1075 PGSPGEKGEKGSAGTPGMPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLDGVPGVKGE 1134
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
GLPGT +KGE G+ G G
Sbjct: 1135 AGLPGT--------PGPTGPAGQKGEPGSDGIPGSAGEKGE-----------------QG 1169
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
GR +GSKGEVGF +G G G PG PG
Sbjct: 1170 VPGR----GFPGFPGSKGDKGSKGEVGFPGLAGSPGIPGVKGEQGFMGPPGPQGQPGLPG 1225
Query: 638 VKG 646
G
Sbjct: 1226 TPG 1228
Score = 45.8 bits (107), Expect = 2e-04
Identities = 47/187 (25%), Positives = 55/187 (29%), Gaps = 4/187 (2%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG +G AG G G+PGL G+ G G+ GP G G
Sbjct: 974 PGVPGKDGQAGHPGQPGPK------------------GDPGLSGTPGSPGLPGPKGSVGG 1015
Query: 278 NGLPGT----SLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXX 445
GLPG+ + EKG KG G
Sbjct: 1016 MGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQGLAGFP 1075
Query: 446 TVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIP 625
G G RGS G +G E GD G G+
Sbjct: 1076 GSPGEKGEKGSAGTPGMPGSPGPRGSPGNIG---------HPGSPGLPGEKGDKGLPGLD 1126
Query: 626 GKPGVKG 646
G PGVKG
Sbjct: 1127 GVPGVKG 1133
Score = 41.6 bits (96), Expect = 0.003
Identities = 46/192 (23%), Positives = 56/192 (29%), Gaps = 9/192 (4%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXT-------GEPGLKGSIGIEGIDG 256
PG+PGL G GQ G G+PG KG G+ G DG
Sbjct: 448 PGQPGLTGEVGQKGQKGESCLACDTEGLRGPPGPQGPPGEIGFPGQPGAKGDRGLPGRDG 507
Query: 257 PMGLKGANGLPGT--SLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXX 430
GL G G PG KG+KG+ G
Sbjct: 508 LEGLPGPQGSPGLIGQPGAKGEPGEIFFDMRLKGDKGDPGFPGQPGMPGRAGTPGRDGHP 567
Query: 431 XXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMG 610
G+ G I GS+G++G VG+ G
Sbjct: 568 GLPGP--KGSPGSIGLKGERGPPGGVGFPGSRGDIG-------PPGPPGVGPIGPVGEKG 618
Query: 611 QDGIPGKPGVKG 646
Q G PG PG G
Sbjct: 619 QAGFPGGPGSPG 630
Score = 40.8 bits (94), Expect = 0.005
Identities = 44/184 (23%), Positives = 57/184 (30%), Gaps = 2/184 (1%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIG--IEGIDGPMGLKG 274
G PG+ G+ G+ G G+PGL G+ G +EG G G +G
Sbjct: 1198 GSPGIPGVKGEQG---------------FMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQG 1242
Query: 275 ANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVN 454
GLPG KG+KGN G V
Sbjct: 1243 QPGLPGH--PGPMGPPGFPGINGPKGDKGNQG--------------------WPGAPGVP 1280
Query: 455 GTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKP 634
G G I GSKG++G GD G G+PG
Sbjct: 1281 GPKGDPGFQGMPGIGGSPGITGSKGDMGLPGVPGFQGQKGLPGLQGVKGDQGDQGVPGPK 1340
Query: 635 GVKG 646
G++G
Sbjct: 1341 GLQG 1344
Score = 40.0 bits (92), Expect = 0.009
Identities = 25/67 (37%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Frame = +2
Query: 98 PGEPGLNGLAGQNG--SSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLK 271
PG PG NGL G G G PG KGSIG G+ G GL
Sbjct: 713 PGRPGFNGLPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLT 772
Query: 272 GANGLPG 292
G GL G
Sbjct: 773 GPPGLQG 779
Score = 39.3 bits (90), Expect = 0.015
Identities = 45/184 (24%), Positives = 52/184 (28%), Gaps = 2/184 (1%)
Frame = +2
Query: 101 GEPGLNGLAG--QNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKG 274
GEPG G+ G + G G PG G G+ G GP G KG
Sbjct: 264 GEPGFPGVPGYGEKGEPGKQGPRGKPGKDGEKGERGSPGIPGDSGYPGLPGRQGPQGEKG 323
Query: 275 ANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVN 454
GLPG EKG++G GA
Sbjct: 324 EAGLPG-----PPGTVIGTMPLGEKGDRGYPGAPGLRGEPGPKGFPGTPGQPGPPGFPTP 378
Query: 455 GTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKP 634
G G RG KG+ GF G G+DG PG P
Sbjct: 379 GQAG---------APGFPGERGEKGDQGFPGVSLP-------------GPSGRDGAPGPP 416
Query: 635 GVKG 646
G G
Sbjct: 417 GPPG 420
Score = 38.5 bits (88), Expect = 0.025
Identities = 40/183 (21%), Positives = 49/183 (26%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG+ G G+ GS TG PGL+G G G G G G
Sbjct: 745 PGLPGIPGTPGEKGS---------IGGPGVPGEQGLTGPPGLQGIRGDPGPPGVQGPAGP 795
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G+PG G G G + G
Sbjct: 796 PGVPGIGPPGAMGPPGGEGPPGSSGPPGIKGEKGFPGFPGLDMPGPKGDKGSQGLPGLTG 855
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
G GSKGE+G G+ G G+PG G
Sbjct: 856 QSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAGTPGLPGEKGDHGLPGSSG 915
Query: 638 VKG 646
+G
Sbjct: 916 PRG 918
Score = 38.5 bits (88), Expect = 0.025
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGL---KGSIGIEGIDGPMGLK 271
G+PG G+ G GS G PGL KG G +G+ GP GL+
Sbjct: 1284 GDPGFQGMPGIGGSPGITGSKGDMGLPGVPGFQGQKGLPGLQGVKGDQGDQGVPGPKGLQ 1343
Query: 272 GANGLPG 292
G G PG
Sbjct: 1344 GPPGPPG 1350
Score = 38.1 bits (87), Expect = 0.033
Identities = 26/91 (28%), Positives = 33/91 (36%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGL G+ G G G PG+ GS G+ G+ GP+G G
Sbjct: 147 PGPPGLPGMKGDPGE-----ILGHVPGTLLKGERGFPGIPGMPGSPGLPGLQGPVGPPGF 201
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G PG +G KG+ G
Sbjct: 202 TGPPGPPGPPGPPGEKGQMGSSFQGPKGDKG 232
Score = 37.0 bits (84), Expect = 0.072
Identities = 45/182 (24%), Positives = 56/182 (30%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G+ GL GL GQ G+ G PG GS G G G G KG +
Sbjct: 855 GQSGLPGLPGQQGTPGVPGFPGSKGEMGVM------GTPGQPGSPGPAGTPGLPGEKGDH 908
Query: 281 GLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNGT 460
GLPG+S KG+KG+ G + G
Sbjct: 909 GLPGSS--------GPRGDPGFKGDKGDVG--------------------------LPGM 934
Query: 461 IGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPGV 640
G + +G KG++G GD G G PG PGV
Sbjct: 935 PGSMEHVDMGSMKGQKGDQGEKGQIG------------------PTGDKGSRGDPGTPGV 976
Query: 641 KG 646
G
Sbjct: 977 PG 978
Score = 37.0 bits (84), Expect = 0.072
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPG----LKGSIGIEGIDGPMG 265
PG PG G G G G PG +KG G+ G +GP G
Sbjct: 1310 PGVPGFQGQKGLPGLQGVKGDQGDQGVPGPKGLQGPPGPPGPYDVIKGEPGLPGPEGPPG 1369
Query: 266 LKGANGLPG 292
LKG G PG
Sbjct: 1370 LKGLQGPPG 1378
Score = 36.6 bits (83), Expect = 0.095
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTG---EPGLKGSIGIEGIDGPMGL 268
PG PG+NG G G+ G PG+ GS G G+ G G
Sbjct: 1256 PGFPGINGPKGDKGNQGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGLPGVPGF 1315
Query: 269 KGANGLPG 292
+G GLPG
Sbjct: 1316 QGQKGLPG 1323
Score = 35.8 bits (81), Expect = 0.16
Identities = 23/65 (35%), Positives = 27/65 (41%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGL G+ GQ+G G PG G+ G G GP GL G
Sbjct: 102 PGNPGLPGIPGQDGPPGPP------------------GIPGCNGTKGERGPLGPPGLPGF 143
Query: 278 NGLPG 292
+G PG
Sbjct: 144 SGNPG 148
Score = 35.8 bits (81), Expect = 0.16
Identities = 25/93 (26%), Positives = 31/93 (33%), Gaps = 2/93 (2%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGS--SXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLK 271
PG PG G+ G+ G+ G PG G G G+ G G +
Sbjct: 669 PGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGLPGEIGRPGSPGRPGFNGLPGNPGPQ 728
Query: 272 GANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G G PG L GEKG+ G
Sbjct: 729 GQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIG 761
Score = 34.7 bits (78), Expect = 0.36
Identities = 48/210 (22%), Positives = 60/210 (28%), Gaps = 20/210 (9%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSI-------------- 235
PG G GL G+ G G PG+ GS+
Sbjct: 893 PGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQKGD 952
Query: 236 -GIEGIDGPMGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXX 412
G +G GP G KG+ G PGT + G KG+ G
Sbjct: 953 QGEKGQIGPTGDKGSRGDPGTP--GVPGKDGQAGHPGQPGPKGDPG-------------- 996
Query: 413 XXXXXXXXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXX 592
++GT G + GS GE G
Sbjct: 997 ------------LSGTPGSPGLPGPKGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKG 1044
Query: 593 EVGDMGQDG-----IPGKPGVKGGFILMNF 667
G+ GQ G IPG+PG KG L F
Sbjct: 1045 AKGEKGQSGLPGIGIPGRPGDKGDQGLAGF 1074
Score = 34.3 bits (77), Expect = 0.47
Identities = 22/64 (34%), Positives = 24/64 (37%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GEPGL G G G G PGL G G +G GP G+ G N
Sbjct: 82 GEPGLPGTKGTRGPPGAAGYP---------------GNPGLPGIPGQDGPPGPPGIPGCN 126
Query: 281 GLPG 292
G G
Sbjct: 127 GTKG 130
Score = 33.9 bits (76), Expect = 0.61
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G+ G GL G G GEPGL G+ G G G G G
Sbjct: 46 GQKGERGLPGLQGVIGFPGMQGPEGPHGPPGQKGDAGEPGLPGTKGTRGPPGAAGYPGNP 105
Query: 281 GLPG 292
GLPG
Sbjct: 106 GLPG 109
Score = 33.9 bits (76), Expect = 0.61
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 9/74 (12%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIG---------IEGID 253
G PGL GL G G G PG KG G G
Sbjct: 1366 GPPGLKGLQGPPGPKGQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPP 1425
Query: 254 GPMGLKGANGLPGT 295
GP GL G+ G PGT
Sbjct: 1426 GPDGLPGSMGPPGT 1439
Score = 33.1 bits (74), Expect = 1.0
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G G G G PG G+ G +G GP G G
Sbjct: 1359 PGLPGPEGPPGLKGLQGPPGPKGQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGP 1418
Query: 278 NGLPG 292
G PG
Sbjct: 1419 RGFPG 1423
Score = 32.3 bits (72), Expect = 1.8
Identities = 41/185 (22%), Positives = 47/185 (25%), Gaps = 2/185 (1%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGL--KGSIGIEGIDGPMGLK 271
PG PGL G G G G PG G G G G G K
Sbjct: 349 PGAPGLRGEPGPKG---------------FPGTPGQPGPPGFPTPGQAGAPGFPGERGEK 393
Query: 272 GANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTV 451
G G PG SL G G G +
Sbjct: 394 GDQGFPGVSLPGPSGRDGAPGPPGPPGPPGQPGHTNGIVECQPGPPGDQGPPGTPGQPGL 453
Query: 452 NGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGK 631
G +G+ +G KGE G G+ G PG+
Sbjct: 454 TGEVGQ---------------KGQKGE-----SCLACDTEGLRGPPGPQGPPGEIGFPGQ 493
Query: 632 PGVKG 646
PG KG
Sbjct: 494 PGAKG 498
Score = 32.0 bits (71), Expect = 2.3
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGL G G+ G G PG G G G GP G +G
Sbjct: 626 PGSPGLPGPKGEAGK-----------------VVPLPGPPGAAGLPGSPGFPGPQGDRGF 668
Query: 278 NGLPG 292
G PG
Sbjct: 669 PGTPG 673
>sp|P17140|CO4A2_CAEEL Collagen alpha 2(IV) chain precursor (Lethal protein 2)
Length = 1758
Score = 48.9 bits (115), Expect = 2e-05
Identities = 47/184 (25%), Positives = 57/184 (30%), Gaps = 1/184 (0%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGLNG G+ G G PGLKG G+ G+ G GL+G
Sbjct: 805 PGLPGLNGQKGEPGVGVPGQPGSP-------------GFPGLKGDAGLPGLPGTPGLEGQ 851
Query: 278 NGLPGT-SLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVN 454
G PG L GEKG++G +
Sbjct: 852 RGFPGAPGLKGGDGLPGLSGQPGYPGEKGDAG--------------------------LP 885
Query: 455 GTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKP 634
G GR + G KGE G + G G G PG P
Sbjct: 886 GVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAPGYP 945
Query: 635 GVKG 646
G+KG
Sbjct: 946 GMKG 949
Score = 46.6 bits (109), Expect = 9e-05
Identities = 44/182 (24%), Positives = 53/182 (29%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PG+ G G NG G+PGL+G G G+ G G KG
Sbjct: 1006 GVPGMKGDRGFNGLPGEKGEAGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGET 1065
Query: 281 GLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNGT 460
GLPG + GEKG G + G
Sbjct: 1066 GLPG------------YGQPGQPGEKGLPG--------------------------IPGK 1087
Query: 461 IGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPGV 640
GR G KGE G+ + GD+GQ G PG G
Sbjct: 1088 AGRQGAPGSPGQDGLPGFPGMKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGA 1147
Query: 641 KG 646
G
Sbjct: 1148 PG 1149
Score = 45.4 bits (106), Expect = 2e-04
Identities = 46/195 (23%), Positives = 52/195 (26%), Gaps = 12/195 (6%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG GL G G G PG+ G GI G+ GP G G
Sbjct: 406 PGYPGNEGLPGPKGDKGDGGIP---------------GAPGVSGPSGIPGLPGPKGEPGY 450
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G PG S+ G KG +G NG
Sbjct: 451 RGTPGQSIPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDSLNGLPGAPGQRGAPGPNG 510
Query: 458 TIGRIXXXXXXXXXXXXXIR------------GSKGEVGFQXXXXXXXXXXXXXXXXEVG 601
GR R G KG G+ VG
Sbjct: 511 YDGRDGVNGLPGAPGTKGDRGGTCSACAPGTKGEKGLPGYSGQPGPQGDRGLPGMPGPVG 570
Query: 602 DMGQDGIPGKPGVKG 646
D G DG+PG G G
Sbjct: 571 DAGDDGLPGPAGRPG 585
Score = 45.4 bits (106), Expect = 2e-04
Identities = 46/189 (24%), Positives = 54/189 (28%), Gaps = 6/189 (3%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGI------EGIDGP 259
PG+PGL GL G+ G + G PGLKG G EG+ G
Sbjct: 1190 PGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPGIPGLKGDSGFPGQPGQEGLPGL 1249
Query: 260 MGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXX 439
G KG GLPG G +G G
Sbjct: 1250 SGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDG-----FPGLPGQKGESGLSGLPG 1304
Query: 440 XXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDG 619
+ G G I G +GE G EVG G G
Sbjct: 1305 APGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGEVGGAGLPG 1364
Query: 620 IPGKPGVKG 646
PG PG+ G
Sbjct: 1365 QPGFPGIPG 1373
Score = 45.1 bits (105), Expect = 3e-04
Identities = 44/193 (22%), Positives = 55/193 (28%), Gaps = 10/193 (5%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+PGL GL G G G PGL G G G+ GP GL G
Sbjct: 727 PGQPGLPGLPGTKGEGGYPGRPGEVGQP---------GFPGLPGMKGDSGLPGPPGLPGH 777
Query: 278 NGLPG----------TSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXX 427
G+PG + G+KG G
Sbjct: 778 PGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLKGDA 837
Query: 428 XXXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDM 607
G G+ + G G+ G+ G
Sbjct: 838 GLPGLPGTPGLEGQRGFPGAPGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFP 897
Query: 608 GQDGIPGKPGVKG 646
GQDG+PG PG+KG
Sbjct: 898 GQDGLPGVPGMKG 910
Score = 42.4 bits (98), Expect = 0.002
Identities = 24/64 (37%), Positives = 28/64 (43%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PG GL G+ G+ TG PGL G G EG+ GP G KG
Sbjct: 365 GAPGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKGDG 424
Query: 281 GLPG 292
G+PG
Sbjct: 425 GIPG 428
Score = 42.0 bits (97), Expect = 0.002
Identities = 43/183 (23%), Positives = 54/183 (29%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG GL G+NG G PG KG G+ G+ G G
Sbjct: 612 PGPPGYPGLKGENGFPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGK---PGQ 668
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
+GLPG G KG+ G G
Sbjct: 669 DGLPGLPGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPAPPG 728
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
G + G+KGE G+ G++GQ G PG PG
Sbjct: 729 QPG------------LPGLPGTKGEGGY---------------PGRPGEVGQPGFPGLPG 761
Query: 638 VKG 646
+KG
Sbjct: 762 MKG 764
Score = 40.8 bits (94), Expect = 0.005
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 98 PGEPGLNGLAGQNG--SSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLK 271
PG PG +GL G +G G PGL+G G+ G+DGP G
Sbjct: 1411 PGLPGRDGLPGADGPVGPPGPSGPQNLVEPGEKGLPGLPGAPGLRGEKGMPGLDGPPGND 1470
Query: 272 GANGLPG 292
G GLPG
Sbjct: 1471 GPPGLPG 1477
Score = 40.0 bits (92), Expect = 0.009
Identities = 45/183 (24%), Positives = 53/183 (28%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG+ GL G G+ G PG+KG+ GI G+ G G G
Sbjct: 915 PGLPGVTGLKGDLGAPGQSGAPGLPGAP---------GYPGMKGNAGIPGVPGFKGDGGL 965
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
GLPG L G KGN G + G
Sbjct: 966 PGLPG--LNGPKGEPGVPGMPGTPGMKGNGGLPG-----------------------LPG 1000
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
G + G KGE G G G G+PG PG
Sbjct: 1001 RDGLSGVPGMKGDRGFNGLPGEKGEAGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPG 1060
Query: 638 VKG 646
KG
Sbjct: 1061 FKG 1063
Score = 39.7 bits (91), Expect = 0.011
Identities = 45/183 (24%), Positives = 53/183 (28%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+PGL G G +G G+PG G G+ GI G G +GA
Sbjct: 1041 PGQPGLRGPQGPSGLPGVPGFKGETGLPGY-------GQPGQPGEKGLPGIPGKAGRQGA 1093
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G PG KGE G G +G
Sbjct: 1094 PGSPGQD--------GLPGFPGMKGESGYPGQDGLPGRDGLPGVPGQKGDLGQ-----SG 1140
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
G IRG KG+ G E G GQ G+PG G
Sbjct: 1141 QPGLSGAPGLDGQPGVPGIRGDKGQGGLPGIPGDRGMDGYPGQKGENGYPGQPGLPGLGG 1200
Query: 638 VKG 646
KG
Sbjct: 1201 EKG 1203
Score = 38.9 bits (89), Expect = 0.019
Identities = 42/186 (22%), Positives = 54/186 (29%), Gaps = 3/186 (1%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+ G++G GQ G + G PGL G G G G GLKG+
Sbjct: 1172 PGDRGMDGYPGQKGENGYPGQP---------------GLPGLGGEKGFAGTPGFPGLKGS 1216
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G PG + G G G ++ G
Sbjct: 1217 PGYPGQD-----GLPGIPGLKGDSGFPGQPGQEGLPGLSGEKGMGGLPGMPGQPGQSIAG 1271
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQ---XXXXXXXXXXXXXXXXEVGDMGQDGIPG 628
+G + G KGE G GD+G +GIPG
Sbjct: 1272 PVGPPGAPGLQGKDGFPGLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPG 1331
Query: 629 KPGVKG 646
K G G
Sbjct: 1332 KRGEDG 1337
Score = 38.5 bits (88), Expect = 0.025
Identities = 28/91 (30%), Positives = 33/91 (36%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG+ GL G+ G G PG+ G G +G G GL G
Sbjct: 1366 PGFPGIPGLKGEGG---------LPGFPGAKGEAGFPGTPGVPGYAGEKGDGGLPGLPGR 1416
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
+GLPG E GEKG G
Sbjct: 1417 DGLPGADGPVGPPGPSGPQNLVEPGEKGLPG 1447
Score = 38.1 bits (87), Expect = 0.033
Identities = 45/199 (22%), Positives = 52/199 (26%), Gaps = 16/199 (8%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PGE G G G G S G+PGL G G +G+ GP G +G
Sbjct: 267 PGEGGQRGYPGNGGLS---------------------GQPGLPGMKGEKGLSGPAGPRGK 305
Query: 278 NGLPGTS----------------LXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXX 409
G PG + + G KGNSG
Sbjct: 306 EGRPGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGGTFNDG 365
Query: 410 XXXXXXXXXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXX 589
G GR G G +G
Sbjct: 366 APGPP----------GLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNEGLP 415
Query: 590 XEVGDMGQDGIPGKPGVKG 646
GD G GIPG PGV G
Sbjct: 416 GPKGDKGDGGIPGAPGVSG 434
Score = 37.7 bits (86), Expect = 0.042
Identities = 22/64 (34%), Positives = 27/64 (42%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GE G+ GL G G+ +GE G+ G G G+DG G GA
Sbjct: 1456 GEKGMPGLDGPPGNDGPPGLPGQRGNDGYPGAPGLSGEKGMGGLPGFPGLDGQPGGPGAP 1515
Query: 281 GLPG 292
GLPG
Sbjct: 1516 GLPG 1519
Score = 36.2 bits (82), Expect = 0.12
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 209 GEPGLKGSIGIEGIDGPMGLKGANGLPG 292
G G++G G EG+ GP GLKGA G PG
Sbjct: 57 GTQGIRGFPGPEGLAGPKGLKGAQGPPG 84
Score = 36.2 bits (82), Expect = 0.12
Identities = 39/183 (21%), Positives = 54/183 (29%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG++GL G+ G PG KG G+ G+ G G G
Sbjct: 146 PGPPGMDGLKGEPAIGY-------------------AGAPGEKGDGGMPGMPGLPGPSGR 186
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
+G PG ++G+ GN+G G
Sbjct: 187 DGYPGEK--------------GDRGDTGNAGPRGPPGEAGSPGNPGIGSIGPKGDPGDLG 232
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
++G I G +G G + G GQ G+PG G
Sbjct: 233 SVGPPGPPGpreFTGSGSIVGPRGNPGEKGDKGEPGEGGQRGYPGNGGLSGQPGLPGMKG 292
Query: 638 VKG 646
KG
Sbjct: 293 EKG 295
Score = 36.2 bits (82), Expect = 0.12
Identities = 42/183 (22%), Positives = 57/183 (31%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+ G GL GQ G GE G G G++G+ GP G G
Sbjct: 590 PGQDGFPGLPGQKGEPTQLTLRPGPPGYPGLK-----GENGFPGQPGVDGLPGPSGPVGP 644
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G PG GEKG++G ++G
Sbjct: 645 PGAPG-----------------YPGEKGDAGLPG-----------------------LSG 664
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
G+ + G+KGE G+ GD G G+PG PG
Sbjct: 665 KPGQ---------DGLPGLPGNKGEAGY-------GQPGQPGFPGAKGDGGLPGLPGTPG 708
Query: 638 VKG 646
++G
Sbjct: 709 LQG 711
Score = 35.4 bits (80), Expect = 0.21
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMG----- 265
G PG G G G++ G PGLKG +G G+ G G
Sbjct: 1313 GMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGEVGGAGLPGQPGFPGIP 1372
Query: 266 -LKGANGLPG 292
LKG GLPG
Sbjct: 1373 GLKGEGGLPG 1382
Score = 32.0 bits (71), Expect = 2.3
Identities = 21/64 (32%), Positives = 25/64 (39%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GE GL G +GQ G G PG G G +G+ GP G G+
Sbjct: 543 GEKGLPGYSGQPGPQGDRGLP---------------GMPGPVGDAGDDGLPGPAGRPGSP 587
Query: 281 GLPG 292
G PG
Sbjct: 588 GPPG 591
Score = 30.8 bits (68), Expect = 5.2
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G GL G G G G PG G G G DG G GA
Sbjct: 72 GPKGLKGAQGPPGPVGIKGDRGAVGVPGFPGNDGGNGRPGEPGPPGAPGWDGCNGTDGAP 131
Query: 281 GLPG 292
G+PG
Sbjct: 132 GIPG 135
Score = 30.4 bits (67), Expect = 6.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 218 GLKGSIGIEGIDGPMGLKGANGLPG 292
G KGS+G G GP G +G G PG
Sbjct: 42 GEKGSMGAPGPQGPPGTQGIRGFPG 66
Score = 30.4 bits (67), Expect = 6.8
Identities = 25/91 (27%), Positives = 30/91 (32%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PGEPG G G +G + G G+ GI G GP G+ G
Sbjct: 110 PGEPGPPGAPGWDGCN------------------------GTDGAPGIPGRPGPPGMPGF 145
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G PG EKG+ G G
Sbjct: 146 PGPPGMDGLKGEPAIGYAGAPGEKGDGGMPG 176
>sp|P05997|CO5A2_HUMAN Collagen alpha 2(V) chain precursor
Length = 1496
Score = 48.5 bits (114), Expect = 2e-05
Identities = 48/186 (25%), Positives = 56/186 (30%), Gaps = 3/186 (1%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGL--- 268
PG PG GL G G + G PG GSIGI+G G MGL
Sbjct: 557 PGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIKGQPGTMGLPGP 616
Query: 269 KGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXT 448
KG+NG PG + GE GN G
Sbjct: 617 KGSNGDPG-----------------KPGEAGNPGVPGQ---------------------- 637
Query: 449 VNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPG 628
G G+ +RG +GE G E G G G+PG
Sbjct: 638 -RGAPGKDGKVGPYGPPGPPGLRGERGEQGPPGPTGFQGHPGPPGPPGEGGKPGDQGVPG 696
Query: 629 KPGVKG 646
PG G
Sbjct: 697 GPGAVG 702
Score = 40.8 bits (94), Expect = 0.005
Identities = 25/67 (37%), Positives = 29/67 (43%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG+ G AG G+ G PGL G+IG +G GP KG
Sbjct: 380 PGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP---VGSPGLPGAIGTDGTPGP---KGP 433
Query: 278 NGLPGTS 298
G PGTS
Sbjct: 434 TGSPGTS 440
Score = 38.5 bits (88), Expect = 0.025
Identities = 41/185 (22%), Positives = 51/185 (27%), Gaps = 3/185 (1%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMG---LK 271
G PG G AG G G PG +G+ G+ G GPMG +
Sbjct: 315 GAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIP 374
Query: 272 GANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTV 451
G++G PG KGE G +GA
Sbjct: 375 GSSGFPGN--------------PGMKGEAGPTGARGPEGPQGQRGETGPP---------- 410
Query: 452 NGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGK 631
G +G +G G G G G G+PG
Sbjct: 411 -GPVGSPGLPGAIGTDGTPGPKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGNSGLPGD 469
Query: 632 PGVKG 646
PG KG
Sbjct: 470 PGFKG 474
Score = 38.1 bits (87), Expect = 0.033
Identities = 42/183 (22%), Positives = 54/183 (29%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G G G+S G+PG KG G +G GP G++G
Sbjct: 449 PGSPGPQGSTGPQGNSGLP------------------GDPGFKGEAGPKGEPGPHGIQGP 490
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G PG E+G++G G G
Sbjct: 491 IGPPG-----------------EEGKRGPRGDP--------------------------G 507
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
T+G GS G G + GD G+ G PG PG
Sbjct: 508 TLGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPG 567
Query: 638 VKG 646
+G
Sbjct: 568 ARG 570
Score = 37.7 bits (86), Expect = 0.042
Identities = 22/64 (34%), Positives = 26/64 (40%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G+PG G+ G G+ TG PG KG G G DGP G G +
Sbjct: 687 GKPGDQGVPGGPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPS 746
Query: 281 GLPG 292
G PG
Sbjct: 747 GTPG 750
Score = 37.4 bits (85), Expect = 0.055
Identities = 23/65 (35%), Positives = 30/65 (46%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+PG +G G+NG+ G PGLKG G +G++GP G GA
Sbjct: 260 PGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAP---GLPGLKGHRGHKGLEGPKGEVGA 316
Query: 278 NGLPG 292
G G
Sbjct: 317 PGSKG 321
Score = 37.4 bits (85), Expect = 0.055
Identities = 26/91 (28%), Positives = 31/91 (34%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PGE G G+ GQ G+ GE G G G +G GP G G
Sbjct: 626 PGEAGNPGVPGQRGAPGKDGKVGPYGPPGPPGLRGERGEQGPPGPTGFQGHPGPPGPPGE 685
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G PG +GE+GN G
Sbjct: 686 GGKPGDQ--GVPGGPGAVGPLGPRGERGNPG 714
Score = 35.8 bits (81), Expect = 0.16
Identities = 23/65 (35%), Positives = 24/65 (36%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGL GL G G G PG KG G G G MG G
Sbjct: 290 PGAPGLPGLKGHRGHKGLEGPKGE------------VGAPGSKGEAGPTGPMGAMGPLGP 337
Query: 278 NGLPG 292
G+PG
Sbjct: 338 RGMPG 342
Score = 35.8 bits (81), Expect = 0.16
Identities = 46/208 (22%), Positives = 57/208 (27%), Gaps = 25/208 (12%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGL------------------- 223
GEPG+ GL G+ G + TG PGL
Sbjct: 717 GEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDR 776
Query: 224 -----KGSIGIEGIDGPMGLKGANGLPG-TSLXXXXXXXXXXXXXXEKGEKGNSGAXXXX 385
KG+ G G DG GL G G PG L G +GN G+
Sbjct: 777 GGIGEKGAEGTAGNDGAGGLPGPLGPPGPAGLLGEKGEPGPRGLVGPPGSRGNPGSRGE- 835
Query: 386 XXXXXXXXXXXXXXXXXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXX 565
NG G + ++G GE G +
Sbjct: 836 ----------------------NGPTGAVGFAGPQGSDGQPGVKGEPGEPGQKGDAGSPG 873
Query: 566 XXXXXXXXXEVGDMGQDGIPGKPGVKGG 649
G G G G PG+KGG
Sbjct: 874 PQGL------AGSPGPHGPNGVPGLKGG 895
Score = 34.3 bits (77), Expect = 0.47
Identities = 19/64 (29%), Positives = 25/64 (39%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G+PG +G G G + G PG G+ G GI G G +G
Sbjct: 942 GDPGSHGRVGVRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGER 1001
Query: 281 GLPG 292
G+PG
Sbjct: 1002 GMPG 1005
Score = 34.3 bits (77), Expect = 0.47
Identities = 20/64 (31%), Positives = 25/64 (39%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GE G G+ G G G PG++GS+G G +GP G G
Sbjct: 1158 GEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPLGPPGVRGSVGEAGPEGPPGEPGPP 1217
Query: 281 GLPG 292
G PG
Sbjct: 1218 GPPG 1221
Score = 33.9 bits (76), Expect = 0.61
Identities = 22/65 (33%), Positives = 25/65 (38%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GEPG G AG +G+ G G G G G GP GL G+
Sbjct: 1041 GEPGPEGPAGNDGTP---------------------GRDGAVGERGDRGDPGPAGLPGSQ 1079
Query: 281 GLPGT 295
G PGT
Sbjct: 1080 GAPGT 1084
Score = 33.5 bits (75), Expect = 0.80
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G+PG +G G +G G PGL G G G GP G G
Sbjct: 966 GDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDK 1025
Query: 281 GLPG 292
G PG
Sbjct: 1026 GPPG 1029
Score = 33.5 bits (75), Expect = 0.80
Identities = 22/90 (24%), Positives = 33/90 (36%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G+ G+ G+ GQ G TG+ G G +G G +GP+G G
Sbjct: 987 GQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPE 1046
Query: 281 GLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G G E+G++G+ G
Sbjct: 1047 GPAGND-----GTPGRDGAVGERGDRGDPG 1071
Score = 32.3 bits (72), Expect = 1.8
Identities = 21/64 (32%), Positives = 25/64 (39%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G G GL GQ G + G+PG G IG G +GP G G +
Sbjct: 219 GPRGPQGLQGQQGGAGPTGPPGEP------------GDPGPMGPIGSRGPEGPPGKPGED 266
Query: 281 GLPG 292
G PG
Sbjct: 267 GEPG 270
Score = 32.3 bits (72), Expect = 1.8
Identities = 20/66 (30%), Positives = 24/66 (36%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG GL G G G+ G+PG+KG G G G G G
Sbjct: 815 PGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGSDGQPGVKGEPGEPGQKGDAGSPGP 874
Query: 278 NGLPGT 295
GL G+
Sbjct: 875 QGLAGS 880
Score = 32.0 bits (71), Expect = 2.3
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PG G G G + G+PG G +G+ G GP G G
Sbjct: 906 GFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGPRGDPGSHGRVGVRGPAGPPGGPGDK 965
Query: 281 GLPG 292
G PG
Sbjct: 966 GDPG 969
Score = 31.2 bits (69), Expect = 4.0
Identities = 24/93 (25%), Positives = 31/93 (33%), Gaps = 3/93 (3%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGP---MGLK 271
G PG +G G+ G G PG G G G GP +G
Sbjct: 1053 GTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGHLGRA 1112
Query: 272 GANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G GLPG ++G+KG+ G
Sbjct: 1113 GKRGLPGPQ--GPRGDKGDHGDRGDRGQKGHRG 1143
Score = 30.0 bits (66), Expect = 8.9
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PG G G G G PG G G GI GP G +G
Sbjct: 1116 GLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPP 1175
Query: 281 GLPGTS 298
G G S
Sbjct: 1176 GPVGPS 1181
>sp|Q90584|COHA1_CHICK Collagen alpha 1(XVII) chain (Bullous pemphigoid antigen 2) (180
kDa bullous pemphigoid antigen 2)
Length = 1146
Score = 47.8 bits (112), Expect = 4e-05
Identities = 44/182 (24%), Positives = 55/182 (30%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GEPG+ G G G G G KGS+G G++GPMG +G
Sbjct: 153 GEPGMKGDMGLQGPKGDRGLPGVPGIPGPVGHQGPEGPKGQKGSMGDPGMEGPMGQRGRE 212
Query: 281 GLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNGT 460
GLPG EKG++G +G G
Sbjct: 213 GLPG------PRGEPGPPGFGEKGDRGPAGPPGPPGPPGSAGLKGPMGSP--------GP 258
Query: 461 IGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPGV 640
G + G+KGE G G+ G GIPG PG
Sbjct: 259 QGPPGPPGLQGFRGEAGLPGAKGEKGATGPPGPKGDQGEKGAHGMTGEQGSRGIPGPPGE 318
Query: 641 KG 646
G
Sbjct: 319 PG 320
Score = 38.5 bits (88), Expect = 0.025
Identities = 26/71 (36%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXX------TGEPGLKGSIGIEGIDGP 259
PGEPG G AGQ G TGEPGL G G G+ G
Sbjct: 316 PGEPGAKGPAGQAGRDGQPGERGEPGLMGIPGARGPPGPSGDTGEPGLTGPQGPPGLPGN 375
Query: 260 MGLKGANGLPG 292
G GA G PG
Sbjct: 376 PGRPGAKGEPG 386
Score = 37.0 bits (84), Expect = 0.072
Identities = 22/65 (33%), Positives = 27/65 (41%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGL G G+ G TG PG KG G +G G G +G+
Sbjct: 262 PGPPGLQGFRGEAG------------LPGAKGEKGATGPPGPKGDQGEKGAHGMTGEQGS 309
Query: 278 NGLPG 292
G+PG
Sbjct: 310 RGIPG 314
Score = 36.2 bits (82), Expect = 0.12
Identities = 29/91 (31%), Positives = 33/91 (36%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG GL G GS G PGL+G G G+ G G KGA
Sbjct: 241 PGPPGSAGLKGPMGSPGPQGPP---------------GPPGLQGFRGEAGLPGAKGEKGA 285
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G PG ++GEKG G
Sbjct: 286 TGPPGPK--------------GDQGEKGAHG 302
Score = 34.7 bits (78), Expect = 0.36
Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 9/75 (12%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGP------- 259
GE G +G+ G+ GS GEPG KG G G DG
Sbjct: 296 GEKGAHGMTGEQGSRGIPGPP---------------GEPGAKGPAGQAGRDGQPGERGEP 340
Query: 260 --MGLKGANGLPGTS 298
MG+ GA G PG S
Sbjct: 341 GLMGIPGARGPPGPS 355
Score = 32.7 bits (73), Expect = 1.4
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSI--GIEGIDGPMGLK 271
PGEPGL G + G+ G PG+ G+ G I GP G
Sbjct: 543 PGEPGLPGFSSHGGTVTMQGPPGPPGPPGPKGDAGVPGAPGIPGTSRGGSRQIQGPPGPP 602
Query: 272 GANGLPG 292
G G PG
Sbjct: 603 GPPGPPG 609
Score = 31.2 bits (69), Expect = 4.0
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PGL G G+ G+ G PG G IG G G G G
Sbjct: 368 GPPGLPGNPGRPGAKGEPGAPGKVISAEGSSTIALPGPPGPPGPIGPTGPPGVPGPVGPA 427
Query: 281 GLPG 292
GLPG
Sbjct: 428 GLPG 431
Score = 31.2 bits (69), Expect = 4.0
Identities = 22/65 (33%), Positives = 25/65 (38%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG +G G+ GSS G PG G G +G GP G G
Sbjct: 492 PGLPGPSGPPGRPGSSVSTSETFVSGPP---------GPPGPPGPKGDQGEPGPRGFTGE 542
Query: 278 NGLPG 292
G PG
Sbjct: 543 PGEPG 547
Score = 30.8 bits (68), Expect = 5.2
Identities = 20/66 (30%), Positives = 23/66 (34%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GEPG G G+ G G PG KG G+ G A
Sbjct: 532 GEPGPRGFTGEPGEPGLPGFSSHGGTVTMQGPPGPPGPPGPKGDAGVPG---------AP 582
Query: 281 GLPGTS 298
G+PGTS
Sbjct: 583 GIPGTS 588
>sp|P15988|CO6A2_CHICK Collagen alpha 2(VI) chain precursor
Length = 1022
Score = 47.4 bits (111), Expect = 5e-05
Identities = 40/146 (27%), Positives = 48/146 (32%)
Frame = +2
Query: 209 GEPGLKGSIGIEGIDGPMGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXX 388
G PGLKG G GI+GP+G G G+PG EKGE G+ G
Sbjct: 277 GSPGLKGRQGDPGIEGPIGYPGPKGVPGLK--------------GEKGEIGSDGRRGAAG 322
Query: 389 XXXXXXXXXXXXXXXXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXX 568
NGT G+ RG KG G+
Sbjct: 323 LAGR-----------------NGTDGQKGKLGRIGPPGCKGDRGDKGPDGYPGDAGDQGE 365
Query: 569 XXXXXXXXEVGDMGQDGIPGKPGVKG 646
+ G G+ G PG PG KG
Sbjct: 366 RGDEGMKGDPGRPGRSGPPGPPGEKG 391
Score = 38.1 bits (87), Expect = 0.033
Identities = 23/64 (35%), Positives = 26/64 (40%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GEPG G G GS GE G KG+ G +G+ GP G GA
Sbjct: 421 GEPGRRGDPGTKGSKGGPGAKGERGDPGPEGPRGLPGEVGNKGARGDQGLPGPRGPTGAV 480
Query: 281 GLPG 292
G PG
Sbjct: 481 GEPG 484
Score = 33.5 bits (75), Expect = 0.80
Identities = 25/91 (27%), Positives = 29/91 (31%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PG G G+ G G PG+ G+ G +G G G KG
Sbjct: 355 GYPGDAGDQGERGDEGMKGDPGRPGRSGPPGPPGEKGSPGIPGNPGAQGPGGTKGRKGET 414
Query: 281 GLPGTSLXXXXXXXXXXXXXXEKGEKGNSGA 373
G PG KG KG GA
Sbjct: 415 GPPGPK-----GEPGRRGDPGTKGSKGGPGA 440
Score = 32.7 bits (73), Expect = 1.4
Identities = 29/96 (30%), Positives = 32/96 (33%), Gaps = 6/96 (6%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGS------IGIEGIDGPM 262
G+PG G G G GEPG GS +G G GP
Sbjct: 445 GDPGPEGPRGLPGEVGNKGARGDQGLPGPRGPTGAVGEPGNIGSRGDPGDLGPRGDAGPP 504
Query: 263 GLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G KG G PG S +KGEKG G
Sbjct: 505 GPKGDRGRPGFS------YPGPRGPQGDKGEKGQPG 534
Score = 30.8 bits (68), Expect = 5.2
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG G G G+ G GEPG G G G GP G G
Sbjct: 518 PGPRGPQGDKGEKGQPGPKGGRGELGPKGTQGTKGEKGEPGDPGPRGEPGTRGPPGEAGP 577
Query: 278 NGLPG 292
G PG
Sbjct: 578 EGTPG 582
>sp|P08120|CO4A1_DROME Collagen alpha 1(IV) chain precursor
Length = 1775
Score = 46.6 bits (109), Expect = 9e-05
Identities = 46/183 (25%), Positives = 55/183 (30%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG G G G +G + G+ GL G+ G +G+DG G KG
Sbjct: 985 PGVSGAKGDKGASGLTGNDGPVGGRGPPGAPGLMGIKGDQGLAGAPGQQGLDGMPGEKGN 1044
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G PG L +KGE G SG G
Sbjct: 1045 QGFPG--LDGPPGLPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGEKGLPGLAVHGRAG 1102
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
G I G KGE G Q E G +G GIPG PG
Sbjct: 1103 PPGEKGDQGRSGIDGRDGINGEKGEQGLQ---------GVWGQPGEKGSVGAPGIPGAPG 1153
Query: 638 VKG 646
+ G
Sbjct: 1154 MDG 1156
Score = 45.1 bits (105), Expect = 3e-04
Identities = 42/161 (26%), Positives = 50/161 (31%)
Frame = +2
Query: 206 TGEPGLKGSIGIEGIDGPMGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXX 385
TG G+ G+ G G+ GP G G NG+PG KGEKG G
Sbjct: 1249 TGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRN 1308
Query: 386 XXXXXXXXXXXXXXXXXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXX 565
+ +G GSKGE G
Sbjct: 1309 GRQGLIGAPGLIGERGLPGLPESRLVG---------LPGPIGPAGSKGERGL-------- 1351
Query: 566 XXXXXXXXXEVGDMGQDGIPGKPGVKGGFILMNFKKDELLN 688
G GQDG PG PG+KG FK + LN
Sbjct: 1352 -------AGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLN 1385
Score = 43.5 bits (101), Expect = 8e-04
Identities = 49/196 (25%), Positives = 57/196 (29%), Gaps = 14/196 (7%)
Frame = +2
Query: 101 GEPGLNGLAGQNG-------SSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGP 259
GEPGLNGL G G + G PG KG G G GP
Sbjct: 358 GEPGLNGLPGNPGQKGEPGRAGATGEPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPGP 417
Query: 260 MGLKGANGLPG-------TSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXX 418
GL G +GLPG +KGEKG +G
Sbjct: 418 QGLNGVDGLPGPQGYNGQKDGAGLPGRPGNEGPPGKKGEKGTAG---------------- 461
Query: 419 XXXXXXXXXTVNGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEV 598
+NG G I +G G G+
Sbjct: 462 ----------LNGPKGSIGPIGHPGPPGPEGQKGDAGLPGYGIQ---------------- 495
Query: 599 GDMGQDGIPGKPGVKG 646
G G GIPG PG+KG
Sbjct: 496 GSKGDAGIPGYPGLKG 511
Score = 43.5 bits (101), Expect = 8e-04
Identities = 24/65 (36%), Positives = 31/65 (47%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG++GL G G+ GEPGL G G++G GP+GL+G
Sbjct: 1149 PGAPGMDGLPGAAGAPGAVGYPGDRGDK---------GEPGLSGLPGLKGETGPVGLQGF 1199
Query: 278 NGLPG 292
G PG
Sbjct: 1200 TGAPG 1204
Score = 41.6 bits (96), Expect = 0.003
Identities = 24/65 (36%), Positives = 28/65 (43%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGL G+ G G TG PG +G GI G+ G G KGA
Sbjct: 943 PGSPGLVGMPGNKGDRGAPGNDGPKGFAGV------TGAPGKRGPAGIPGVSGAKGDKGA 996
Query: 278 NGLPG 292
+GL G
Sbjct: 997 SGLTG 1001
Score = 41.2 bits (95), Expect = 0.004
Identities = 42/183 (22%), Positives = 51/183 (27%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG G+ G G+ GE GL G+ G +G G G G
Sbjct: 659 PGAPGAKGVQGFKGAEGLPGIPGPKGEFGFK------GEKGLSGAPGNDGTPGRAGRDGY 712
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNG 457
G+PG S+ +KG G SG G
Sbjct: 713 PGIPGQSIKGEPGFHGRDGAKGDKGSFGRSGEKGEPGSCALDEIKMPAKGNKGEP----G 768
Query: 458 TIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPG 637
G G KG G Q E G+ G G+PG PG
Sbjct: 769 QTGMPGPPGEDGSPGERGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPG 828
Query: 638 VKG 646
G
Sbjct: 829 KDG 831
Score = 38.1 bits (87), Expect = 0.033
Identities = 20/64 (31%), Positives = 26/64 (40%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G+PG G G G G PG+ G G +G DG GL+G +
Sbjct: 122 GDPGPYGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLS 181
Query: 281 GLPG 292
G+PG
Sbjct: 182 GMPG 185
Score = 38.1 bits (87), Expect = 0.033
Identities = 23/64 (35%), Positives = 26/64 (40%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PGLNGL G+ G G PG GS+G G G GL G +
Sbjct: 857 GPPGLNGLQGEKGDRGPTGPI---------------GFPGADGSVGYPGDRGDAGLPGVS 901
Query: 281 GLPG 292
G PG
Sbjct: 902 GRPG 905
Score = 38.1 bits (87), Expect = 0.033
Identities = 26/91 (28%), Positives = 36/91 (39%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG++G+ G++G+ G PG G G G+ G G +G
Sbjct: 925 PGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDR---GAPGNDGPKGFAGVTGAPGKRGP 981
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G+PG S KG+KG SG
Sbjct: 982 AGIPGVS--------------GAKGDKGASG 998
Score = 37.7 bits (86), Expect = 0.042
Identities = 46/191 (24%), Positives = 57/191 (29%), Gaps = 8/191 (4%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPG--LKGSIGIEGIDGPMGLK 271
PG+ G G AG NG G PG ++GS G GI G GLK
Sbjct: 451 PGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLK 510
Query: 272 GANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTV 451
G+ G E+G KGN+GA
Sbjct: 511 GSKG--------------------ERGFKGNAGAPGDSKLGRP----------------- 533
Query: 452 NGTIGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGK 631
GT G G KG++G + + G G GIPGK
Sbjct: 534 -GTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGK 592
Query: 632 ------PGVKG 646
PG +G
Sbjct: 593 DGARGPPGERG 603
Score = 37.4 bits (85), Expect = 0.055
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G+ G +G+ G++G + G PG+ G+ G++G+ G G GA
Sbjct: 1108 GDQGRSGIDGRDGINGEKGEQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPGAV 1167
Query: 281 GLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G PG +KGE G SG
Sbjct: 1168 GYPG--------------DRGDKGEPGLSG 1183
Score = 36.6 bits (83), Expect = 0.095
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2
Query: 209 GEPGLKGSIGIEGIDGPMGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G GLKG +G G++GP G KG G PG +KGE+G+ G
Sbjct: 98 GPTGLKGEMGFPGMEGPSGDKGQKGDPG-----------PYGQRGDKGERGSPG 140
Score = 36.6 bits (83), Expect = 0.095
Identities = 33/107 (30%), Positives = 35/107 (32%), Gaps = 15/107 (14%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGL---------------KGS 232
PGE G G G +G + TGEPG KG
Sbjct: 599 PGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGY 658
Query: 233 IGIEGIDGPMGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGA 373
G G G G KGA GLPG KGEKG SGA
Sbjct: 659 PGAPGAKGVQGFKGAEGLPG--------IPGPKGEFGFKGEKGLSGA 697
Score = 35.4 bits (80), Expect = 0.21
Identities = 20/64 (31%), Positives = 25/64 (39%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G PG+ G +G G G PGL G G+ G+ GP G GA
Sbjct: 107 GFPGMEGPSGDKGQKGDPGPYGQRGDKGER------GSPGLHGQAGVPGVQGPAGNPGAP 160
Query: 281 GLPG 292
G+ G
Sbjct: 161 GING 164
Score = 35.4 bits (80), Expect = 0.21
Identities = 22/67 (32%), Positives = 26/67 (38%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+PG +G G G TG G KG G+ G +G G KG
Sbjct: 1355 PGQPGQDGFPGAPG------------------LKGDTGPQGFKGERGLNGFEGQKGDKGD 1396
Query: 278 NGLPGTS 298
GL G S
Sbjct: 1397 RGLQGPS 1403
Score = 34.7 bits (78), Expect = 0.36
Identities = 27/91 (29%), Positives = 32/91 (35%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PG+NG G +G G G KG E D G KG
Sbjct: 157 PGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGE 216
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G GT+ EKGE+G+SG
Sbjct: 217 PGWRGTA-----GLAGPQGFPGEKGERGDSG 242
Score = 34.7 bits (78), Expect = 0.36
Identities = 25/91 (27%), Positives = 32/91 (35%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG GLNG+ G G G PG G G+ G G +G +G
Sbjct: 1267 PGASGLNGIPGAKGD-IGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGL 1325
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
GLP + L E+G G+ G
Sbjct: 1326 PGLPESRLVGLPGPIGPAGSKGERGLAGSPG 1356
Score = 34.7 bits (78), Expect = 0.36
Identities = 23/65 (35%), Positives = 26/65 (40%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG PGL G G G GE GL G G +G G GL+G
Sbjct: 1364 PGAPGLKGDTGPQG---------------------FKGERGLNGFEGQKGDKGDRGLQGP 1402
Query: 278 NGLPG 292
+GLPG
Sbjct: 1403 SGLPG 1407
Score = 34.3 bits (77), Expect = 0.47
Identities = 27/91 (29%), Positives = 30/91 (32%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GEPGL G G+ G G G G G G G G G N
Sbjct: 304 GEPGLVGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLN 363
Query: 281 GLPGTSLXXXXXXXXXXXXXXEKGEKGNSGA 373
GLPG +KGE G +GA
Sbjct: 364 GLPGN--------------PGQKGEPGRAGA 380
Score = 34.3 bits (77), Expect = 0.47
Identities = 20/66 (30%), Positives = 24/66 (36%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG G G G G + G G+ G G+ GIDG G GA
Sbjct: 880 PGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGA 939
Query: 278 NGLPGT 295
G PG+
Sbjct: 940 KGEPGS 945
Score = 33.9 bits (76), Expect = 0.61
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 9/100 (9%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLK-- 271
PGE G GL G G GE G +G++G+ G G GL+
Sbjct: 782 PGERGYTGLKGNTGPQGPPGVEGPRGLNGPR------GEKGNQGAVGVPGNPGKDGLRGI 835
Query: 272 -------GANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
G G PG S EKG++G +G
Sbjct: 836 PGRNGQPGPRGEPGISRPGPMGPPGLNGLQGEKGDRGPTG 875
Score = 33.5 bits (75), Expect = 0.80
Identities = 27/92 (29%), Positives = 32/92 (34%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGA 277
PG+PG NG GEPG G G+ GI G +G KG
Sbjct: 1469 PGQPGRNG---------------------------PKGEPGRPGERGLIGIQGELGEKGE 1501
Query: 278 NGLPGTSLXXXXXXXXXXXXXXEKGEKGNSGA 373
GL G + E GE+G GA
Sbjct: 1502 RGLIGET--GNVGRPGPKGDRGEPGERGYEGA 1531
Score = 32.7 bits (73), Expect = 1.4
Identities = 43/182 (23%), Positives = 52/182 (28%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
GE GL G GQ G G PGLKG G +G G GL G
Sbjct: 1347 GERGLAGSPGQPGQDGFP------------------GAPGLKGDTGPQGFKGERGLNGFE 1388
Query: 281 GLPGTSLXXXXXXXXXXXXXXEKGEKGNSGAXXXXXXXXXXXXXXXXXXXXXXXXTVNGT 460
G G +KG++G G + G
Sbjct: 1389 GQKG-----------------DKGDRGLQGPSG-----------------------LPGL 1408
Query: 461 IGRIXXXXXXXXXXXXXIRGSKGEVGFQXXXXXXXXXXXXXXXXEVGDMGQDGIPGKPGV 640
+G+ G+ GE GF G G+DG PG PG
Sbjct: 1409 VGQKGDTGYPGLNGNDGPVGAPGERGFTGPK---------------GRDGRDGTPGLPGQ 1453
Query: 641 KG 646
KG
Sbjct: 1454 KG 1455
Score = 32.0 bits (71), Expect = 2.3
Identities = 26/71 (36%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGL---KGSIGIEG---IDGP 259
PG PG+ G G+ SS GEPGL KG G EG +DG
Sbjct: 269 PGAPGIKGEKGEPASSFPVKPTHTVMGPRGDMGQK--GEPGLVGRKGEPGPEGDTGLDGQ 326
Query: 260 MGLKGANGLPG 292
G KG G PG
Sbjct: 327 KGEKGLPGGPG 337
Score = 31.2 bits (69), Expect = 4.0
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 224 KGSIGIEGIDGPMGLKGANGLPGTSLXXXXXXXXXXXXXXEKGEKGNSG 370
KG+ G+ G GP GLKG G PG +KG+KG+ G
Sbjct: 88 KGNRGLPGPLGPTGLKGEMGFPGME-----------GPSGDKGQKGDPG 125
Score = 31.2 bits (69), Expect = 4.0
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = +2
Query: 98 PGEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIE---GIDGPMGL 268
PG+ GL G+ G+NG G PGL G G + G GP+G
Sbjct: 827 PGKDGLRGIPGRNGQPGPRGEPGISRPGPM-------GPPGLNGLQGEKGDRGPTGPIGF 879
Query: 269 KGANGLPG 292
GA+G G
Sbjct: 880 PGADGSVG 887
Score = 31.2 bits (69), Expect = 4.0
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +2
Query: 101 GEPGLNGLAGQNGSSXXXXXXXXXXXXXXXXXXXXTGEPGLKGSIGIEGIDGPMGLKGAN 280
G+ G G G NG+ G PGL G G G+ P G KG
Sbjct: 1410 GQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPGMLPPPGPKGEP 1469
Query: 281 GLPG 292
G PG
Sbjct: 1470 GQPG 1473
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,956,991
Number of Sequences: 369166
Number of extensions: 1338839
Number of successful extensions: 14240
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9716
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8742211660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)