Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_01544
(894 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P09534|DVR1_XENLA DVR-1 protein precursor (Vegetal hemis... 36 0.17
sp|Q27377|OB10_DROME Putative odorant-binding protein A10 p... 33 1.1
sp|Q8SX83|SPEN_DROME Split ends protein 33 1.4
sp|P54677|PI4K_DICDI Phosphatidylinositol 4-kinase (PI4-kin... 32 2.4
sp|Q85V93|MATK_FICCA Maturase K (Intron maturase) 32 2.4
sp|Q9JJI6|PIGO_MOUSE Phosphatidylinositol-glycan biosynthes... 32 3.1
sp|Q03101|CYAG_DICDI Adenylate cyclase, germination specifi... 32 3.1
sp|Q9UX32|ARLY_SULSO Argininosuccinate lyase (Arginosuccina... 32 3.1
sp|P17120|BIMC_EMENI Kinesin-like protein bimC 31 5.3
sp|Q9W1C9|PEB3_DROME Ejaculatory bulb-specific protein 3 pr... 31 5.3
>sp|P09534|DVR1_XENLA DVR-1 protein precursor (Vegetal hemisphere VG1 protein) (VG-1)
Length = 360
Score = 35.8 bits (81), Expect = 0.17
Identities = 28/103 (27%), Positives = 50/103 (48%)
Frame = +2
Query: 113 LVIIHSKMLSNSSYQINNTDKSQNIRNSRYYEGDLMQVVIEPKKVNASSRVLNDSTKDYR 292
L++ + L + S N T+ Q+ ++ G ++++ PKK ++ ND KD +
Sbjct: 165 LLVAQTFRLLHKSLFFNLTEICQSWQDPLKNLGLVLEIF--PKKESSWMSTANDECKDIQ 222
Query: 293 EFNSSGLLNATQNNVKSKTNPLRKRNCNILPDDLNIKNVCPSK 421
F + LL T N ++ K P RKR+ + LP N+C +
Sbjct: 223 TFLYTSLLTVTLNPLRCK-RPRRKRSYSKLP--FTASNICKKR 262
>sp|Q27377|OB10_DROME Putative odorant-binding protein A10 precursor (Antennal protein
10) (OS-D protein)
Length = 155
Score = 33.1 bits (74), Expect = 1.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 383 PDDLNIKNVCPSKISKECNKISEKESHGTSEVVQH 487
PD +K + P I +C K +EK+ +G +V +H
Sbjct: 84 PDAKMLKEILPDAIQTDCTKCTEKQRYGAEKVTRH 118
>sp|Q8SX83|SPEN_DROME Split ends protein
Length = 5560
Score = 32.7 bits (73), Expect = 1.4
Identities = 22/82 (26%), Positives = 40/82 (48%)
Frame = +2
Query: 227 VIEPKKVNASSRVLNDSTKDYREFNSSGLLNATQNNVKSKTNPLRKRNCNILPDDLNIKN 406
V+ P+K R+ D + N+SG+ + +++ +K +PL NC+++ D LN K+
Sbjct: 1077 VVSPRK-----RIKMDYHHHHHHSNASGVESTGEHSSINKPSPLLLSNCDVIHDPLNRKS 1131
Query: 407 VCPSKISKECNKISEKESHGTS 472
E ++SE S S
Sbjct: 1132 --------EIRRVSETPSGSPS 1145
>sp|P54677|PI4K_DICDI Phosphatidylinositol 4-kinase (PI4-kinase) (PtdIns-4-kinase)
(PI4K-alpha)
Length = 1093
Score = 32.0 bits (71), Expect = 2.4
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 161 NNTDKSQNIRNSRYYEGDLMQVVIEPKKVNASSRVLNDSTKDYREFNSSGLLNATQNNVK 340
+N + + NI N+ D I P + + +S +ND Y N++ ++ NN+K
Sbjct: 185 SNNNNNNNINNNNSNNDDNNNNEILPNENSDNS--INDENNQYGNSNNNNNISGENNNIK 242
Query: 341 SKTNPLRKRNCNI 379
N K + NI
Sbjct: 243 IDINSQNKSDSNI 255
>sp|Q85V93|MATK_FICCA Maturase K (Intron maturase)
Length = 505
Score = 32.0 bits (71), Expect = 2.4
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = -2
Query: 386 LVKYYNFVSLMDLFCFLHYFE*HSVNHLN*IHDNLSLNH*VL*KMH*PFLVQLLLALNHP 207
+VKYYN S+ +F FL +HLN + D L + +H LVQ L
Sbjct: 119 IVKYYNLRSIHSIFPFLE----DKFSHLNYVSDVL-----IPYPIHLEILVQTLRYWVKD 169
Query: 206 HSTLNCVYFEIYQYY-----LSDKNYLTTFS 129
S+L+ + F ++ YY + Y++ FS
Sbjct: 170 ASSLHLLRFFLHDYYNWNSFIIPNKYISIFS 200
>sp|Q9JJI6|PIGO_MOUSE Phosphatidylinositol-glycan biosynthesis, class O protein (PIG-O)
Length = 1093
Score = 31.6 bits (70), Expect = 3.1
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = -1
Query: 750 LLLFDPSSILLKLGSSNFSTSTLL*PYS---KTEYLLDKPFPSIFMSTSNNFVGILD 589
LLL+ P ++L+K G++ T T+L P+S ++ LD P I+ F G L+
Sbjct: 758 LLLWRPVTVLVKAGAATSRTRTILTPFSGPPTSQADLDYVVPQIYRHMQEEFQGRLE 814
>sp|Q03101|CYAG_DICDI Adenylate cyclase, germination specific (ATP pyrophosphate-lyase)
(Adenylyl cyclase)
Length = 858
Score = 31.6 bits (70), Expect = 3.1
Identities = 26/115 (22%), Positives = 46/115 (40%)
Frame = +2
Query: 140 SNSSYQINNTDKSQNIRNSRYYEGDLMQVVIEPKKVNASSRVLNDSTKDYREFNSSGLLN 319
+N+ INN+D N N+ N S ++ N+ D N + +
Sbjct: 758 NNNDININNSDNVNNYENNN----------------NFSDKIENNDG-DNNNINDNNYKS 800
Query: 320 ATQNNVKSKTNPLRKRNCNILPDDLNIKNVCPSKISKECNKISEKESHGTSEVVQ 484
+NN+KSKT L K + +++ D K C + N + ++ E V+
Sbjct: 801 TNENNIKSKT--LFKDSKSLINDIKMAKENCDNNDDNNNNNNNNNNNNNNDENVE 853
>sp|Q9UX32|ARLY_SULSO Argininosuccinate lyase (Arginosuccinase) (ASAL)
Length = 444
Score = 31.6 bits (70), Expect = 3.1
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Frame = -1
Query: 858 LFFNSIAVTGTALPLLFTTESPLVNLLHFSSRTMDKLLLFDPSSILLKLGSSNFSTSTLL 679
+ +N+++ T + +L +T S L L+ SR + L+ F S+ L+KL S+ STS+L+
Sbjct: 209 IIYNTLSATSSRADIL-STISELTVLMVVLSRIAEDLIFFS-SNKLIKLPDSHVSTSSLM 266
Query: 678 *PYSKT----EYLLDKPFPSIFMSTSNNFVGILDSKQTGF 571
P + E L K SI M TS + I TG+
Sbjct: 267 -PQKRNPVTMEILRAKAAESIGMLTS--LLSIYKGLPTGY 303
>sp|P17120|BIMC_EMENI Kinesin-like protein bimC
Length = 1184
Score = 30.8 bits (68), Expect = 5.3
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = +2
Query: 284 DYREFNSSGLLNATQNNVKSKTNPLRKRNCNILPDDLNIKNVCPSKISKECNKISEKESH 463
D E+N S L+A NN K++T+ + N+L + +++ SK+ + N +S +
Sbjct: 648 DLSEYNRS--LDAACNNAKAETSSAHEDMNNVLEEIKDLREEVKSKVGEGLNGLSAAAAR 705
Query: 464 GTSEVV 481
+ EV+
Sbjct: 706 ISEEVI 711
>sp|Q9W1C9|PEB3_DROME Ejaculatory bulb-specific protein 3 precursor (Ejaculatory
bulb-specific protein III) (PEB-meIII)
Length = 126
Score = 30.8 bits (68), Expect = 5.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 368 NCNILPDDLNIKNVCPSKISKECNKISEKESHGTSEVVQH 487
N P+ +K P + EC+K SEK+ T +V+++
Sbjct: 50 NGKCTPEGRELKKSLPDALKTECSKCSEKQRQNTDKVIRY 89
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,520,223
Number of Sequences: 369166
Number of extensions: 1612459
Number of successful extensions: 4425
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4421
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8982382310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)