Planaria EST Database


DrC_01477

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01477
         (942 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P52826|CACP_COLLI  Carnitine O-acetyltransferase precurso...   246   7e-65
sp|Q704S8|CACP_RAT  Carnitine O-acetyltransferase (Carnitine...   243   4e-64
sp|P47934|CACP_MOUSE  Carnitine O-acetyltransferase (Carniti...   240   4e-63
sp|P43155|CACP_HUMAN  Carnitine O-acetyltransferase (Carniti...   233   8e-61
sp|P13222|CLAT_PIG  Choline O-acetyltransferase (CHOACTase) ...   185   1e-46
sp|P32738|CLAT_RAT  Choline O-acetyltransferase (CHOACTase) ...   184   4e-46
sp|Q03059|CLAT_MOUSE  Choline O-acetyltransferase (CHOACTase...   181   3e-45
sp|P28329|CLAT_HUMAN  Choline O-acetyltransferase (CHOACTase...   178   2e-44
sp|P07668|CLAT_DROME  Choline O-acetyltransferase (CHOACTase...   172   1e-42
sp|O19094|OCTC_BOVIN  Peroxisomal carnitine O-octanoyltransf...   151   3e-36
>sp|P52826|CACP_COLLI Carnitine O-acetyltransferase precursor (Carnitine acetylase) (CAT)
            (Carnitine acetyltransferase) (CrAT)
          Length = 627

 Score =  246 bits (628), Expect = 7e-65
 Identities = 130/313 (41%), Positives = 191/313 (61%), Gaps = 1/313 (0%)
 Frame = +2

Query: 2    PLCMNQYLTLFNACRIPGVKRDSIYTGKSYLINNHDRISYITVVHNNRFFIMDVIDQETQ 181
            PLCMNQY  + ++CRIPG KRDSI            +  +ITVVHN +FF +DV + +  
Sbjct: 168  PLCMNQYYQILSSCRIPGPKRDSIVN----YAKGKKQSRHITVVHNFQFFELDVYNSDGS 223

Query: 182  MLYSQETLFRGFSQILDMS-QNAGLPIGLMTAENRNTWGTSFNRMRSNPLNEESFLYIQK 358
             L + + LF    +I + S Q    P+G++T  +RN+W  ++N +  +  N+ES   I+K
Sbjct: 224  PLTTDQ-LFIQLEKIWNTSLQTNKEPVGILTTNHRNSWAKAYNNLLKDKTNKESVRTIEK 282

Query: 359  SILLFCLDKPVFIEEYKNENLNSIVARNMLHGNGCKMNSPNRWFDKTLQIIVSSDGACGM 538
            SI   CLD P+      ++   S VA  MLHG G + NS NRWFDKTLQ I++ DG+CG+
Sbjct: 283  SICTICLDAPM--PRVSDDIYKSPVAAQMLHGGGSRWNSGNRWFDKTLQFIIAEDGSCGL 340

Query: 539  NYEHTPAEAPPLISIIDYIYKNIHLEESKSSSKSDTCKVKEIKFSLDKKSEEEIDASKNN 718
             YEH PAE PP+++++D+I +     E   S        K+++F++  + + +I+ +K N
Sbjct: 341  VYEHAPAEGPPIVALLDHIVEYTKKPELVRSPMIPLPMPKKLRFNITPEIKSDIEKAKQN 400

Query: 719  INSLVRDLELHAVTFSDFGKAKIKSLKVSPDAFVQMGIQLGYYNLHNIPGSTYESGSLRR 898
            +N +V DL++  + F  FGK   KS K+SPDAF+Q+ +QL YY ++    +TYES SLR 
Sbjct: 401  LNIMVEDLDVIVLVFHQFGKNYPKSEKISPDAFIQLALQLAYYRMYGHSCATYESASLRM 460

Query: 899  FNLRRTDTIRSCS 937
            F L RTDTIRS S
Sbjct: 461  FRLGRTDTIRSTS 473
>sp|Q704S8|CACP_RAT Carnitine O-acetyltransferase (Carnitine acetylase) (CAT) (Carnitine
            acetyltransferase) (CrAT)
          Length = 626

 Score =  243 bits (621), Expect = 4e-64
 Identities = 128/313 (40%), Positives = 196/313 (62%), Gaps = 1/313 (0%)
 Frame = +2

Query: 2    PLCMNQYLTLFNACRIPGVKRDSIYTGKSYLINNHDRISYITVVHNNRFFIMDVIDQETQ 181
            PLCMNQY  + ++CR+PG+K+DS+       + +    ++ITVVHN +FF +DV   +  
Sbjct: 167  PLCMNQYYQILSSCRVPGLKQDSVVN----FLKSKKPPTHITVVHNYQFFELDVYHSDGT 222

Query: 182  MLYSQETLFRGFSQILDMS-QNAGLPIGLMTAENRNTWGTSFNRMRSNPLNEESFLYIQK 358
             L S + +F    +I + S Q+   P+G++T+ +RN+W  +++ +  + +N ES   IQK
Sbjct: 223  PLTSDQ-IFVQLEKIWNSSLQSNKEPVGILTSNHRNSWAKAYSSLIKDKVNRESVNSIQK 281

Query: 359  SILLFCLDKPVFIEEYKNENLNSIVARNMLHGNGCKMNSPNRWFDKTLQIIVSSDGACGM 538
            SI   CLDK V      ++   S VA  MLHG G K NS NRWFDKTLQ IV+ DG+CGM
Sbjct: 282  SIFTVCLDKQV--PRVSDDVYRSHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGM 339

Query: 539  NYEHTPAEAPPLISIIDYIYKNIHLEESKSSSKSDTCKVKEIKFSLDKKSEEEIDASKNN 718
             YEH  AE PP+++++D++ +     E   S        K+++F++  + + +I+ +K N
Sbjct: 340  VYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQN 399

Query: 719  INSLVRDLELHAVTFSDFGKAKIKSLKVSPDAFVQMGIQLGYYNLHNIPGSTYESGSLRR 898
            I+ +++DL++  + F  FGK   KS K+SPDAF+Q+ +QL YY ++    +TYES SLR 
Sbjct: 400  ISIMIQDLDIMMLVFHHFGKDFPKSQKLSPDAFIQIALQLAYYRIYGQACATYESASLRM 459

Query: 899  FNLRRTDTIRSCS 937
            F+L RTDTIRS S
Sbjct: 460  FHLGRTDTIRSAS 472
>sp|P47934|CACP_MOUSE Carnitine O-acetyltransferase (Carnitine acetylase) (CAT) (Carnitine
            acetyltransferase) (CrAT)
          Length = 626

 Score =  240 bits (613), Expect = 4e-63
 Identities = 128/313 (40%), Positives = 195/313 (62%), Gaps = 1/313 (0%)
 Frame = +2

Query: 2    PLCMNQYLTLFNACRIPGVKRDSIYTGKSYLINNHDRISYITVVHNNRFFIMDVIDQETQ 181
            PLCMNQY  + ++CR  G K+DS+       + +    ++ITVVHN +FF +DV + +  
Sbjct: 167  PLCMNQYYQILSSCREVGPKQDSVVN----FLKSKRPPTHITVVHNYQFFELDVYNHDGT 222

Query: 182  MLYSQETLFRGFSQILDMS-QNAGLPIGLMTAENRNTWGTSFNRMRSNPLNEESFLYIQK 358
             L S + +F    +I + S Q+   P+G++T+ +RNTW  ++N +  + +N ES   IQK
Sbjct: 223  PLTSDQ-IFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQK 281

Query: 359  SILLFCLDKPVFIEEYKNENLNSIVARNMLHGNGCKMNSPNRWFDKTLQIIVSSDGACGM 538
            SI   CLDK V      ++   + VA  MLHG G K NS NRWFDKTLQ IV+ DG+CGM
Sbjct: 282  SIFTVCLDKQV--PRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGM 339

Query: 539  NYEHTPAEAPPLISIIDYIYKNIHLEESKSSSKSDTCKVKEIKFSLDKKSEEEIDASKNN 718
             YEH  AE PP+++++D++ +     E   S        K+++F++  + + +I+ +K N
Sbjct: 340  VYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQN 399

Query: 719  INSLVRDLELHAVTFSDFGKAKIKSLKVSPDAFVQMGIQLGYYNLHNIPGSTYESGSLRR 898
            ++ +++DL++  +TF  FGK   KS K+SPDAF+Q+ +QL YY ++    +TYES SLR 
Sbjct: 400  LSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRM 459

Query: 899  FNLRRTDTIRSCS 937
            F+L RTDTIRS S
Sbjct: 460  FHLGRTDTIRSAS 472
>sp|P43155|CACP_HUMAN Carnitine O-acetyltransferase (Carnitine acetylase) (CAT) (Carnitine
            acetyltransferase) (CrAT)
          Length = 626

 Score =  233 bits (593), Expect = 8e-61
 Identities = 123/313 (39%), Positives = 191/313 (61%), Gaps = 1/313 (0%)
 Frame = +2

Query: 2    PLCMNQYLTLFNACRIPGVKRDSIYTGKSYLINNHDRISYITVVHNNRFFIMDVIDQETQ 181
            PLCMNQY  + ++CR+PG K+D++    S         ++ITVVHN +FF +DV   +  
Sbjct: 167  PLCMNQYYQILSSCRVPGPKQDTV----SNFSKTKKPPTHITVVHNYQFFELDVYHSDGT 222

Query: 182  MLYSQETLFRGFSQILDMS-QNAGLPIGLMTAENRNTWGTSFNRMRSNPLNEESFLYIQK 358
             L + + +F    +I + S Q    P+G++T+ +RN+W  ++N +  + +N +S   IQK
Sbjct: 223  PLTADQ-IFVQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYNTLIKDKVNRDSVRSIQK 281

Query: 359  SILLFCLDKPVFIEEYKNENLNSIVARNMLHGNGCKMNSPNRWFDKTLQIIVSSDGACGM 538
            SI   CLD  +       +   S VA  MLHG G ++NS NRWFDKTLQ IV+ DG+CG+
Sbjct: 282  SIFTVCLDATM--PRVSEDVYRSHVAGQMLHGGGSRLNSGNRWFDKTLQFIVAEDGSCGL 339

Query: 539  NYEHTPAEAPPLISIIDYIYKNIHLEESKSSSKSDTCKVKEIKFSLDKKSEEEIDASKNN 718
             YEH  AE  P+++++DY+ +     E   S        K+++F++  + + +I+ +K N
Sbjct: 340  VYEHAAAEGFPIVTLLDYVIEYTKKPELVRSPMVPLPMPKKLRFNITPEIKSDIEKAKQN 399

Query: 719  INSLVRDLELHAVTFSDFGKAKIKSLKVSPDAFVQMGIQLGYYNLHNIPGSTYESGSLRR 898
            ++ +++DL++  + F  FGK   KS K+SPDAF+QM +QL YY ++    +TYES SLR 
Sbjct: 400  LSIMIQDLDITVMVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYESASLRM 459

Query: 899  FNLRRTDTIRSCS 937
            F+L RTDTIRS S
Sbjct: 460  FHLGRTDTIRSAS 472
>sp|P13222|CLAT_PIG Choline O-acetyltransferase (CHOACTase) (Choline acetylase) (ChAT)
          Length = 641

 Score =  185 bits (470), Expect = 1e-46
 Identities = 109/320 (34%), Positives = 173/320 (54%), Gaps = 7/320 (2%)
 Frame = +2

Query: 2    PLCMNQYLTLFNACRIPGVKRDSIYTGKSYLINNHDRISYITVVHNNRFFIMDVIDQETQ 181
            PLCM QY  LF++ R+PG  +D++   KS ++   +   ++ V   N+FF++DV+    +
Sbjct: 160  PLCMKQYYGLFSSYRLPGHTQDTLVAQKSSVMPEPE---HVIVACCNQFFVLDVVINFRR 216

Query: 182  MLYSQETLFRGFSQILDMSQNAGL---PIGLMTAENRNTWGTSFNRMRSNPLNEESFLYI 352
            +  S+  LF    +I+ M+ N      PIGL+T++ R+ W  +   +  +  N +S   I
Sbjct: 217  L--SEGDLFTQLRKIVRMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 274

Query: 353  QKSILLFCLDKPVFIEEYKNENLNSIVARNMLHGNGCKMNSPNRWFDKTLQIIVSSDGAC 532
            ++ I L CLD P  +E           A  +LHG GC  N  NRW+DK+LQ +V  DG C
Sbjct: 275  ERCICLVCLDAPGGMELSDTNR-----ALQLLHGGGCSKNGANRWYDKSLQFVVGRDGTC 329

Query: 533  GMNYEHTPAEAPPLISIIDYIYKNIHLEESKSSSKSDTCKVKEIKFSLDKKSEEEID--- 703
            G+  EH+P +   L+   +++ K++ ++ SK   ++D+         L  K   EI    
Sbjct: 330  GVVCEHSPFDGIVLVQCTEHLLKHM-VKSSKKMVRADSVSELPAPRRLRWKCSPEIQGLL 388

Query: 704  -ASKNNINSLVRDLELHAVTFSDFGKAKIKSLKVSPDAFVQMGIQLGYYNLHNIPGSTYE 880
             +S   +  +V++L+     F D+GK  IK  K SPDAF+Q+ +QL +Y LH     TYE
Sbjct: 389  ASSAEKLQQIVKNLDFTVYKFDDYGKTFIKQQKCSPDAFIQVALQLAFYRLHGRLVPTYE 448

Query: 881  SGSLRRFNLRRTDTIRSCSP 940
            S S+RRF+  R D IRS +P
Sbjct: 449  SASIRRFHEGRVDNIRSATP 468
>sp|P32738|CLAT_RAT Choline O-acetyltransferase (CHOACTase) (Choline acetylase) (ChAT)
          Length = 640

 Score =  184 bits (466), Expect = 4e-46
 Identities = 103/319 (32%), Positives = 173/319 (54%), Gaps = 6/319 (1%)
 Frame = +2

Query: 2    PLCMNQYLTLFNACRIPGVKRDSIYTGKSYLINNHDRISYITVVHNNRFFIMDVIDQETQ 181
            PLCM QY  LF++ R+PG  +D++   KS ++   +   ++ V   N+FF++DV+    +
Sbjct: 159  PLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIMPEPE---HVIVACCNQFFVLDVVINFRR 215

Query: 182  MLYSQETLFRGFSQILDMSQNAGL---PIGLMTAENRNTWGTSFNRMRSNPLNEESFLYI 352
            +  S+  LF    +I+ M+ N      PIGL+T++ R+ W  +   +  +  N +S   I
Sbjct: 216  L--SEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKARTVLLKDSTNRDSLDMI 273

Query: 353  QKSILLFCLDKPVFIEEYKNENLNSIVARNMLHGNGCKMNSPNRWFDKTLQIIVSSDGAC 532
            ++ I L CLD P        E  ++  A  +LHG GC +N  NRW+DK+LQ +V  DG C
Sbjct: 274  ERCICLVCLDGPG-----TGELSDTHRALQLLHGGGCSLNGANRWYDKSLQFVVGRDGTC 328

Query: 533  GMNYEHTPAEAPPLISIIDYIYKNIHLEESK---SSSKSDTCKVKEIKFSLDKKSEEEID 703
            G+  EH+P +   L+   +++ K++     K   + S S+    + ++     +++  + 
Sbjct: 329  GVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRLRLKCSPETQGHLA 388

Query: 704  ASKNNINSLVRDLELHAVTFSDFGKAKIKSLKVSPDAFVQMGIQLGYYNLHNIPGSTYES 883
            +S   +  +V++L+     F ++GK  IK  K SPD F+Q+ +QL YY L+     TYES
Sbjct: 389  SSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQLAYYRLYQRLVPTYES 448

Query: 884  GSLRRFNLRRTDTIRSCSP 940
             S+RRF   R D IRS +P
Sbjct: 449  ASIRRFQEGRVDNIRSATP 467
>sp|Q03059|CLAT_MOUSE Choline O-acetyltransferase (CHOACTase) (Choline acetylase) (ChAT)
          Length = 641

 Score =  181 bits (459), Expect = 3e-45
 Identities = 102/319 (31%), Positives = 173/319 (54%), Gaps = 6/319 (1%)
 Frame = +2

Query: 2    PLCMNQYLTLFNACRIPGVKRDSIYTGKSYLINNHDRISYITVVHNNRFFIMDVIDQETQ 181
            PLCM QY  LF++ R+PG  +D++   KS ++   +   ++ V   N+FF++DV+    +
Sbjct: 160  PLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIMPEPE---HVIVACCNQFFVLDVVINFRR 216

Query: 182  MLYSQETLFRGFSQILDMSQNAGL---PIGLMTAENRNTWGTSFNRMRSNPLNEESFLYI 352
            +  S+  LF    +I+ M+ N      PIGL+T++ R+ W  +   +  +  N +S   I
Sbjct: 217  L--SEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKARTVLLKDSTNRDSLDMI 274

Query: 353  QKSILLFCLDKPVFIEEYKNENLNSIVARNMLHGNGCKMNSPNRWFDKTLQIIVSSDGAC 532
            ++ I L CLD P        +  ++  A  +LHG GC +N  NRW+DK+LQ +V  DG C
Sbjct: 275  ERCICLVCLDGPG-----TGDLSDTHRALQLLHGGGCSLNGANRWYDKSLQFVVGRDGTC 329

Query: 533  GMNYEHTPAEAPPLISIIDYIYKNIHLEESKS---SSKSDTCKVKEIKFSLDKKSEEEID 703
            G+  EH+P +   L+   +++ K++     K     S S+    + +++    +++  + 
Sbjct: 330  GVVCEHSPFDGIVLVQCTEHLLKHMMTGNKKLVRVDSVSELPAPRRLRWKCSPETQGHLA 389

Query: 704  ASKNNINSLVRDLELHAVTFSDFGKAKIKSLKVSPDAFVQMGIQLGYYNLHNIPGSTYES 883
            +S   +  +V++L+     F ++GK  IK  K SPD F+Q+ +QL YY L+     TYES
Sbjct: 390  SSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDGFIQVALQLAYYRLYQRLVPTYES 449

Query: 884  GSLRRFNLRRTDTIRSCSP 940
             S+RRF   R D IRS +P
Sbjct: 450  ASIRRFQEGRVDNIRSATP 468
>sp|P28329|CLAT_HUMAN Choline O-acetyltransferase (CHOACTase) (Choline acetylase) (ChAT)
          Length = 748

 Score =  178 bits (452), Expect = 2e-44
 Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 6/319 (1%)
 Frame = +2

Query: 2    PLCMNQYLTLFNACRIPGVKRDSIYTGKSYLINNHDRISYITVVHNNRFFIMDVIDQETQ 181
            PLCM QY  LF++ R+PG  +D++    S ++   +   ++ V   N+FF++DV+    +
Sbjct: 267  PLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPE---HVIVACCNQFFVLDVVINFRR 323

Query: 182  MLYSQETLFRGFSQILDMSQNAGL---PIGLMTAENRNTWGTSFNRMRSNPLNEESFLYI 352
            +  S+  LF    +I+ M+ N      PIGL+T++ R+ W  +   +  +  N +S   I
Sbjct: 324  L--SEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381

Query: 353  QKSILLFCLDKPVFIEEYKNENLNSIVARNMLHGNGCKMNSPNRWFDKTLQIIVSSDGAC 532
            ++ I L CLD P  +E           A  +LHG G   N  NRW+DK+LQ +V  DG C
Sbjct: 382  ERCICLVCLDAPGGVELSDTHR-----ALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTC 436

Query: 533  GMNYEHTPAEAPPLISIIDYIYKNIHLEESK---SSSKSDTCKVKEIKFSLDKKSEEEID 703
            G+  EH+P +   L+   +++ K++     K   + S S+    + +++    + +  + 
Sbjct: 437  GVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLA 496

Query: 704  ASKNNINSLVRDLELHAVTFSDFGKAKIKSLKVSPDAFVQMGIQLGYYNLHNIPGSTYES 883
            +S   +  +V++L+     F ++GK  IK  K SPDAF+Q+ +QL +Y LH     TYES
Sbjct: 497  SSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYES 556

Query: 884  GSLRRFNLRRTDTIRSCSP 940
             S+RRF   R D IRS +P
Sbjct: 557  ASIRRFQEGRVDNIRSATP 575
>sp|P07668|CLAT_DROME Choline O-acetyltransferase (CHOACTase) (Choline acetylase)
            (Acetyl-CoA) (ChAT) [Contains: Choline
            O-acetyltransferase 67 kDa chain; Choline
            O-acetyltransferase 54 kDa chain; Choline
            O-acetyltransferase 13 kDa chain]
          Length = 721

 Score =  172 bits (436), Expect = 1e-42
 Identities = 100/333 (30%), Positives = 174/333 (52%), Gaps = 21/333 (6%)
 Frame = +2

Query: 2    PLCMNQYLTLFNACRIPGVKRDSIYTGKSYLINNHDRISYITVVHNNRFFIMDVIDQETQ 181
            PLCM QY  L  +CR PGVK+DS +      +N+ DR  ++ V+  N+ + + +   +  
Sbjct: 224  PLCMAQYYRLLGSCRRPGVKQDSQFLPSRERLNDEDR--HVVVICRNQMYCVVLQASDRG 281

Query: 182  MLYSQETLFRGFSQILDMSQNAG------LPIGLMTAENRNTWGTSFNRMRSNPLNEESF 343
             L   E      SQIL +  +A       +P+GL+TAE R+TW      ++ +  N+ + 
Sbjct: 282  KLSESEIA----SQILYVLSDAPCLPAKPVPVGLLTAEPRSTWARDREMLQEDERNQRNL 337

Query: 344  LYIQKSILLFCLDKPVF-------------IEEYKNENLNSIVARNMLHGNGCKMNSPNR 484
              I+ + ++ CLD+P+                    +   + +A  M+HG G + NS NR
Sbjct: 338  ELIETAQVVLCLDEPLAGNFNARGFTGATPTVHRAGDRDETNMAHEMIHGGGSEYNSGNR 397

Query: 485  WFDKTLQIIVSSDGACGMNYEHTPAEAPPLISIIDYIYKNI--HLEESKSSSKSDTCKVK 658
            WFDKT+Q+I+ +DG  G+ YEH+ +E   ++ +++ IYK I  H +E     +      +
Sbjct: 398  WFDKTMQLIICTDGTWGLCYEHSCSEGIAVVQLLEKIYKKIEEHPDEDNGLPQHHLPPPE 457

Query: 659  EIKFSLDKKSEEEIDASKNNINSLVRDLELHAVTFSDFGKAKIKSLKVSPDAFVQMGIQL 838
             +++ +  + +     +  +++  + DL+ +   +  +GK  IKS +VSPD ++Q+ +QL
Sbjct: 458  RLEWHVGPQLQLRFAQASKSVDKCIDDLDFYVYRYQSYGKTFIKSCQVSPDVYIQLALQL 517

Query: 839  GYYNLHNIPGSTYESGSLRRFNLRRTDTIRSCS 937
             +Y L+    +TYES S RRF   R D IR+ S
Sbjct: 518  AHYKLYGRLVATYESASTRRFLHGRVDCIRAAS 550
>sp|O19094|OCTC_BOVIN Peroxisomal carnitine O-octanoyltransferase (COT)
          Length = 612

 Score =  151 bits (381), Expect = 3e-36
 Identities = 104/319 (32%), Positives = 157/319 (49%), Gaps = 7/319 (2%)
 Frame = +2

Query: 2    PLCMNQYLTLFNACRIPGVKRDSIYTGKSYLINNHDRISYITVVHNNRFFIMDVIDQETQ 181
            PL MNQ+  LF+ C+IPG+ RDSI          H   S++ V+   R F+ DV+ +   
Sbjct: 153  PLDMNQFRMLFSTCKIPGITRDSIINYFRTESEGHSP-SHLAVLCRGRVFVFDVMHEGYL 211

Query: 182  MLYSQETLFRGFSQILDMSQNAGLPIGLMTAENRNTWGTSFNRMRS-NPLNEESFLYIQK 358
            M   +      + Q    S+  G  +  +T E R  W  +   + S NP N      IQ 
Sbjct: 212  MTAPEIQRQLTYIQKKCHSEPDGPGVAALTTEERTRWAKAREYLISLNPENLTILEKIQS 271

Query: 359  SILLFCLDKP---VFIEEYKNENLNSIVARNMLHGNGCKMNSPNRWFDKTLQIIVSSDGA 529
            S+L+FCLD     V  E+Y      S V+  +L+G+        RW DK+  +I  S+G 
Sbjct: 272  SLLVFCLDDDSPHVTPEDY------SQVSAKILNGDPTV-----RWGDKSYNLIAFSNGV 320

Query: 530  CGMNYEHTPAEAPPLISIIDYIYKNIHLEESK---SSSKSDTCKVKEIKFSLDKKSEEEI 700
             G N +H P +A  L+ +  Y+ +NI   E +   S    D    +E+ F++D+K   +I
Sbjct: 321  FGSNCDHAPFDAMVLVKVCYYVDENILENEGRWKGSEKVRDIPVPEELVFTVDEKVLNDI 380

Query: 701  DASKNNINSLVRDLELHAVTFSDFGKAKIKSLKVSPDAFVQMGIQLGYYNLHNIPGSTYE 880
            + +K      V DL+L    F+ FGK   K  ++ PD F+Q+ +QL YY LH  PG  YE
Sbjct: 381  NQAKAQYFKQVSDLQLVVYAFTSFGKKLTKEKQLHPDTFIQLALQLAYYRLHGRPGCCYE 440

Query: 881  SGSLRRFNLRRTDTIRSCS 937
            +   R F   RT+T+R C+
Sbjct: 441  TAMTRLFYHGRTETVRPCT 459
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,344,711
Number of Sequences: 369166
Number of extensions: 1821164
Number of successful extensions: 5328
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5231
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9750928390
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)