Planaria EST Database


DrC_01401

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01401
         (825 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P79136|CAPZB_BOVIN  F-actin capping protein beta subunit ...   336   5e-92
sp|P48603|CAPZB_DROME  F-actin capping protein beta subunit       330   3e-90
sp|P47757|CAPZB_MOUSE  F-actin capping protein beta subunit ...   329   5e-90
sp|P47756|CAPZB_HUMAN  F-actin capping protein beta subunit ...   329   5e-90
sp|P14315|CAPZB_CHICK  F-actin capping protein beta subunit ...   328   8e-90
sp|P34686|CAPZB_CAEEL  F-actin capping protein beta subunit       301   2e-81
sp|P13021|CAPZB_DICDI  F-actin capping protein beta subunit ...   259   5e-69
sp|Q9HGP5|CAPZB_SCHPO  Probable F-actin capping protein beta...   233   6e-61
sp|Q9M9G7|CAPZB_ARATH  Probable F-actin capping protein beta...   208   1e-53
sp|P13517|CAPZB_YEAST  F-actin capping protein beta subunit       186   9e-47
>sp|P79136|CAPZB_BOVIN F-actin capping protein beta subunit (CapZ beta)
          Length = 301

 Score =  336 bits (861), Expect = 5e-92
 Identities = 165/262 (62%), Positives = 202/262 (77%), Gaps = 14/262 (5%)
 Frame = +1

Query: 1   LDLMRRLPPQKIDKSLQDLIELVPDLCEDLLSSVDQPLKISKDTKTGKDYLLGDYNRDGD 180
           LDLMRRLPPQ+I+K+L DLI+LVP LCEDLLSSVDQPLKI++D   GKDYLL DYNRDGD
Sbjct: 39  LDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGD 98

Query: 181 SYRSPWSNSYDPPLEDGSLPSDRVRSLEIEANKAFEVYREMYYDGGVSSVYLWDLDSGFA 360
           SYRSPWSN YDPPLEDG++PS R+R LE+EAN AF+ YR++Y++GGVSSVYLWDLD GFA
Sbjct: 99  SYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFA 158

Query: 361 GAVLIKKAGD-IKSATGCWDSIHVIEVEEKGSGRNARYKLTSTIMLWLETQNS------- 516
           G +LIKKAGD  K   GCWDSIHV+EV+EK SGR A YKLTST+MLWL+T  S       
Sbjct: 159 GVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGSGTMNL 218

Query: 517 ------ETEKEVPLSDANNHIVNIGRLVEDMENSIRKQLNDVYFGTSKNLVDSLRSGLSK 678
                 + EK+  +SD + HI NIGRLVEDMEN IR  LN++YFG +K++V+ LRS  + 
Sbjct: 219 GGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSVQTF 278

Query: 679 SVEDQQRKLCQDVKIAIQNKNQ 744
           + + +Q  L  D+  A++ K Q
Sbjct: 279 ADKSKQEALKNDLVEALKRKQQ 300
>sp|P48603|CAPZB_DROME F-actin capping protein beta subunit
          Length = 276

 Score =  330 bits (846), Expect = 3e-90
 Identities = 164/261 (62%), Positives = 201/261 (77%), Gaps = 14/261 (5%)
 Frame = +1

Query: 1   LDLMRRLPPQKIDKSLQDLIELVPDLCEDLLSSVDQPLKISKDTKTGKDYLLGDYNRDGD 180
           LDLMRRLPPQ+I+K+L DLI+L PDLCEDLLSSVDQPLKI+KD + GKDYLL DYNRDGD
Sbjct: 10  LDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYLLCDYNRDGD 69

Query: 181 SYRSPWSNSYDPPLEDGSLPSDRVRSLEIEANKAFEVYREMYYDGGVSSVYLWDLDSGFA 360
           SYRSPWSNSY PPLEDG +PS+R+R LEIEAN AF+ YREMYY+GGVSSVYLWDLD GFA
Sbjct: 70  SYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVYLWDLDHGFA 129

Query: 361 GAVLIKKAGD-IKSATGCWDSIHVIEVEEKGSGRNARYKLTSTIMLWLETQNS------- 516
             +LIKKAGD  K   GCWDSIHV+EV+EK +GR A YKLTST MLWL+T          
Sbjct: 130 AVILIKKAGDGSKMIRGCWDSIHVVEVQEKTTGRTAHYKLTSTAMLWLQTNKQGSGTMNL 189

Query: 517 ------ETEKEVPLSDANNHIVNIGRLVEDMENSIRKQLNDVYFGTSKNLVDSLRSGLSK 678
                 + E++  +S+++ HI NIG++VE+MEN IR  LN++YFG +K++V+ LRS  S 
Sbjct: 190 GGSLTRQQEQDANVSESSPHIANIGKMVEEMENKIRNTLNEIYFGKTKDIVNGLRSTQSL 249

Query: 679 SVEDQQRKLCQDVKIAIQNKN 741
           + + QQ  + QD+  AI  +N
Sbjct: 250 ADQRQQAAMKQDLAAAILRRN 270
>sp|P47757|CAPZB_MOUSE F-actin capping protein beta subunit (CapZ beta)
          Length = 277

 Score =  329 bits (844), Expect = 5e-90
 Identities = 159/236 (67%), Positives = 189/236 (80%), Gaps = 14/236 (5%)
 Frame = +1

Query: 1   LDLMRRLPPQKIDKSLQDLIELVPDLCEDLLSSVDQPLKISKDTKTGKDYLLGDYNRDGD 180
           LDLMRRLPPQ+I+K+L DLI+LVP LCEDLLSSVDQPLKI++D   GKDYLL DYNRDGD
Sbjct: 10  LDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGD 69

Query: 181 SYRSPWSNSYDPPLEDGSLPSDRVRSLEIEANKAFEVYREMYYDGGVSSVYLWDLDSGFA 360
           SYRSPWSN YDPPLEDG++PS R+R LE+EAN AF+ YR++Y++GGVSSVYLWDLD GFA
Sbjct: 70  SYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFA 129

Query: 361 GAVLIKKAGD-IKSATGCWDSIHVIEVEEKGSGRNARYKLTSTIMLWLETQNS------- 516
           G +LIKKAGD  K   GCWDSIHV+EV+EK SGR A YKLTST+MLWL+T  S       
Sbjct: 130 GVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGSGTMNL 189

Query: 517 ------ETEKEVPLSDANNHIVNIGRLVEDMENSIRKQLNDVYFGTSKNLVDSLRS 666
                 + EK+  +SD + HI NIGRLVEDMEN IR  LN++YFG +K++V+ LRS
Sbjct: 190 GGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRS 245
>sp|P47756|CAPZB_HUMAN F-actin capping protein beta subunit (CapZ beta)
          Length = 277

 Score =  329 bits (844), Expect = 5e-90
 Identities = 159/236 (67%), Positives = 189/236 (80%), Gaps = 14/236 (5%)
 Frame = +1

Query: 1   LDLMRRLPPQKIDKSLQDLIELVPDLCEDLLSSVDQPLKISKDTKTGKDYLLGDYNRDGD 180
           LDLMRRLPPQ+I+K+L DLI+LVP LCEDLLSSVDQPLKI++D   GKDYLL DYNRDGD
Sbjct: 10  LDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGD 69

Query: 181 SYRSPWSNSYDPPLEDGSLPSDRVRSLEIEANKAFEVYREMYYDGGVSSVYLWDLDSGFA 360
           SYRSPWSN YDPPLEDG++PS R+R LE+EAN AF+ YR++Y++GGVSSVYLWDLD GFA
Sbjct: 70  SYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFA 129

Query: 361 GAVLIKKAGD-IKSATGCWDSIHVIEVEEKGSGRNARYKLTSTIMLWLETQNS------- 516
           G +LIKKAGD  K   GCWDSIHV+EV+EK SGR A YKLTST+MLWL+T  S       
Sbjct: 130 GVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGSGTMNL 189

Query: 517 ------ETEKEVPLSDANNHIVNIGRLVEDMENSIRKQLNDVYFGTSKNLVDSLRS 666
                 + EK+  +SD + HI NIGRLVEDMEN IR  LN++YFG +K++V+ LRS
Sbjct: 190 GGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRS 245
>sp|P14315|CAPZB_CHICK F-actin capping protein beta subunit isoforms 1 and 2 (CapZ 36/32)
           (CapZ B1 and B2) (Beta-actinin subunit II)
          Length = 277

 Score =  328 bits (842), Expect = 8e-90
 Identities = 158/236 (66%), Positives = 190/236 (80%), Gaps = 14/236 (5%)
 Frame = +1

Query: 1   LDLMRRLPPQKIDKSLQDLIELVPDLCEDLLSSVDQPLKISKDTKTGKDYLLGDYNRDGD 180
           LDLMRRLPPQ+I+K+L DLI+LVP LCEDLLSSVDQPLKI++D   GKDYLL DYNRDGD
Sbjct: 10  LDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGD 69

Query: 181 SYRSPWSNSYDPPLEDGSLPSDRVRSLEIEANKAFEVYREMYYDGGVSSVYLWDLDSGFA 360
           SYRSPWSN YDPPLEDG++PS R+R LE+EAN AF+ YR++Y++GGVSSVYLWDLD GFA
Sbjct: 70  SYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFA 129

Query: 361 GAVLIKKAGD-IKSATGCWDSIHVIEVEEKGSGRNARYKLTSTIMLWLETQNS------- 516
           G +LIKKAGD  K   GCWDSIHV+EV+EK SGR A YKLTST+MLWL+T  +       
Sbjct: 130 GVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNL 189

Query: 517 ------ETEKEVPLSDANNHIVNIGRLVEDMENSIRKQLNDVYFGTSKNLVDSLRS 666
                 + EK+  +SD++ HI NIGRLVEDMEN IR  LN++YFG +K++V+ LRS
Sbjct: 190 GGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRS 245
>sp|P34686|CAPZB_CAEEL F-actin capping protein beta subunit
          Length = 270

 Score =  301 bits (770), Expect = 2e-81
 Identities = 148/261 (56%), Positives = 194/261 (74%), Gaps = 15/261 (5%)
 Frame = +1

Query: 1   LDLMRRLPPQKIDKSLQDLIELVPDLCEDLLSSVDQPLKISKDTKTGKDYLLGDYNRDGD 180
           LDLMRRLPPQ  DK+L DLI+L P L +DLLS++DQPLKI+ D +TGK YLL DYNRDGD
Sbjct: 10  LDLMRRLPPQHCDKNLTDLIDLCPHLVDDLLSTIDQPLKIAADRETGKQYLLCDYNRDGD 69

Query: 181 SYRSPWSNSYDPPLEDGSLPSDRVRSLEIEANKAFEVYREMYYDGGVSSVYLWDLDS-GF 357
           SYRSPWSN+YDPPLEDG LPS++ R +EIEAN AFE YR++Y++GGVSSVY WDLD+ GF
Sbjct: 70  SYRSPWSNTYDPPLEDGQLPSEKRRKMEIEANAAFESYRDLYFEGGVSSVYFWDLDNGGF 129

Query: 358 AGAVLIKKAGD-IKSATGCWDSIHVIEVEEKGSGRNARYKLTSTIMLWLETQNSET---- 522
           AG VLIKK GD  K+ TGCWDSIHVIE+ E+   R A YKLTSTIMLWL+T  S +    
Sbjct: 130 AGIVLIKKEGDGAKNITGCWDSIHVIEITER--ARQAHYKLTSTIMLWLQTNKSSSGVMN 187

Query: 523 ---------EKEVPLSDANNHIVNIGRLVEDMENSIRKQLNDVYFGTSKNLVDSLRSGLS 675
                    E + P++D N H+ N+GR++ED E+ +R  +N++YFG +K ++  LRS   
Sbjct: 188 LGGSLTRQHEMDAPINDQNTHLANMGRMIEDQESKMRLTINEIYFGKTKKVMSDLRSTEK 247

Query: 676 KSVEDQQRKLCQDVKIAIQNK 738
           +S  ++Q ++ +++  A+ N+
Sbjct: 248 QSELEKQDEIVRELNNAMANR 268
>sp|P13021|CAPZB_DICDI F-actin capping protein beta subunit (CAP32)
          Length = 272

 Score =  259 bits (663), Expect = 5e-69
 Identities = 131/263 (49%), Positives = 176/263 (66%), Gaps = 17/263 (6%)
 Frame = +1

Query: 1   LDLMRRLPPQKIDKSLQDLIELVPDLCEDLLSSVDQPLKISKDTKTGKDYLLGDYNRDGD 180
           LDLMRRLPP +I+ +L  L++LVPDL EDLLSS+DQPLK++ D  + KDYLL DYNRD D
Sbjct: 10  LDLMRRLPPSQIEDNLAGLLDLVPDLTEDLLSSIDQPLKVAYDAVSKKDYLLCDYNRDAD 69

Query: 181 SYRSPWSNSYDPPLEDGSLPSDRVRSLEIEANKAFEVYREMYYDGGVSSVYLWDLDSGFA 360
           SYRSPWSN YDPPL     PS ++R +E++AN+ FE+Y  +Y++GGVSSVY WDLD  FA
Sbjct: 70  SYRSPWSNKYDPPLSGACYPSSKLRDIEVQANEIFEIYLNLYFEGGVSSVYCWDLDDNFA 129

Query: 361 GAVLIKKAGDI----KSATGCWDSIHVIEVEEKGSGRNARYKLTSTIMLWLETQNSET-- 522
             VL+KK  D     +   G WDSIHV+EV + G    A YKLTST+ML +ET N  T  
Sbjct: 130 AVVLMKKTQDQSKKGQPMRGTWDSIHVVEV-KLGKKDKAVYKLTSTVMLSIETDNDNTGK 188

Query: 523 -----------EKEVPLSDANNHIVNIGRLVEDMENSIRKQLNDVYFGTSKNLVDSLRSG 669
                      EKE   ++ + H VNIG++VEDME+ +R+ L  +YFG +K +V++LR+ 
Sbjct: 189 VNLAGSLTRQDEKEYTFNEVDTHCVNIGKMVEDMESKLRQTLETIYFGKTKEVVNTLRNA 248

Query: 670 LSKSVEDQQRKLCQDVKIAIQNK 738
              S  ++++ L   +  AI N+
Sbjct: 249 TGNSELEKRKNLSNQIGSAIGNR 271
>sp|Q9HGP5|CAPZB_SCHPO Probable F-actin capping protein beta subunit
          Length = 268

 Score =  233 bits (593), Expect = 6e-61
 Identities = 119/240 (49%), Positives = 159/240 (66%), Gaps = 18/240 (7%)
 Frame = +1

Query: 1   LDLMRRLPPQKIDKSLQDLIELVPDLCEDLLSSVDQPLKISKDTKTGKDYLLGDYNRDGD 180
           LDL+RRL P+ I K+L  ++ + PDL + LLSSVDQPLK++  +++G  YLL D+NRDGD
Sbjct: 8   LDLLRRLNPKDISKNLDTILSVAPDLADVLLSSVDQPLKVNTCSESGNQYLLCDFNRDGD 67

Query: 181 SYRSPWSNSYDPPLEDGSLPSDRVRSLEIEANKAFEVYREMYYDGGVSSVYLWDLDSGFA 360
           SYRSPWSN YDPPLEDG + +DRVR LE+  N+A  VY ++YY+GGVSSVYLWD D  +A
Sbjct: 68  SYRSPWSNKYDPPLEDGLVSTDRVRKLEVSLNEAIRVYLDLYYEGGVSSVYLWDQDDSYA 127

Query: 361 GAVLIKKAGDIKSATGCWDSIHVIEVEEKGSGRNARYKLTSTIMLWLETQNSE------- 519
           GAVLIKKA    S+   WDSIHV E           Y+LTSTI+L+L + + E       
Sbjct: 128 GAVLIKKASTSNSSG--WDSIHVFECLPTTETNVYDYRLTSTIILFLSSGSEEQSALPSK 185

Query: 520 -----------TEKEVPLSDANNHIVNIGRLVEDMENSIRKQLNDVYFGTSKNLVDSLRS 666
                      T + +P +D +  I N+G+LVE+ME  +R  L DVYFG +K++++  RS
Sbjct: 186 ALNLSGHLTRQTSQRLPAADDDTEIANVGKLVEEMETRMRNFLQDVYFGKTKDIINQTRS 245
>sp|Q9M9G7|CAPZB_ARATH Probable F-actin capping protein beta subunit (CapZ-beta)
          Length = 256

 Score =  208 bits (530), Expect = 1e-53
 Identities = 107/240 (44%), Positives = 154/240 (64%), Gaps = 19/240 (7%)
 Frame = +1

Query: 1   LDLMRRLPPQKIDKSLQDLIELVPDLCEDLLSSVDQPLKISKDTKTGKDYLLGDYNRDGD 180
           L L+RR+PP++ + +L  L+ L+P    DLLS VD PL++ +D ++GKD++L +YNRD D
Sbjct: 5   LGLLRRMPPKQSETALSALLSLIPQHSSDLLSQVDLPLQVLRDIESGKDFILCEYNRDAD 64

Query: 181 SYRSPWSNSYDPPLEDGSLPSDRVRSLEIEANKAFEVYREMYYDGGVSSVYLWDLDS-GF 357
           SYRSPWSN Y PPLED   PS  +R LE+EAN  F +YR+ YY+GG+SSVY+W+ D+ GF
Sbjct: 65  SYRSPWSNKYLPPLEDALYPSSELRKLEVEANDIFAIYRDQYYEGGISSVYMWEDDNEGF 124

Query: 358 AGAVLIKKAGDIKS-------ATGCWDSIHVIEVEEKGSGRNARYKLTSTIMLWLETQNS 516
               LIKK G             G WD+IHVI+V  +     A+Y LTSTIML L T + 
Sbjct: 125 VACFLIKKDGSKSGHGRRGCLEEGAWDAIHVIQVGSE-EEEMAQYCLTSTIMLSLTTDDE 183

Query: 517 ETEK-----------EVPLSDANNHIVNIGRLVEDMENSIRKQLNDVYFGTSKNLVDSLR 663
            + K           ++ L+ A+ H+ N+GR++E++E  +R  L+ VYFG ++ +V +LR
Sbjct: 184 SSGKFGLSGSIRRQMKMELAVADGHLCNMGRMIEELEGKLRNSLDQVYFGKTREMVCTLR 243
>sp|P13517|CAPZB_YEAST F-actin capping protein beta subunit
          Length = 287

 Score =  186 bits (471), Expect = 9e-47
 Identities = 112/271 (41%), Positives = 162/271 (59%), Gaps = 34/271 (12%)
 Frame = +1

Query: 1   LDLMRRLPPQKIDKSLQDLIELVPDLCEDLLSSVDQPLKISKDTK-TGKDYLLGDYNRDG 177
           LDL+RRL P  + ++L +LIEL P+L +DLLSSVD PL   KD+  + ++YL  DYNRD 
Sbjct: 10  LDLLRRLNPTTLQENLNNLIELQPNLAQDLLSSVDVPLSTQKDSADSNREYLCCDYNRDI 69

Query: 178 DSYRSPWSNSYDPPL-----EDGSLPSDRVRSLEIEANKAFEVYREMYYDGGVSSVYLWD 342
           DS+RSPWSN+Y P L     +D   PS  +R LEI AN +F+VYR++YY+GG+SSVYLWD
Sbjct: 70  DSFRSPWSNTYYPELSPKDLQDSPFPSAPLRKLEILANDSFDVYRDLYYEGGISSVYLWD 129

Query: 343 LDS------GFAGAVLIKKAGDIKSATGCWDSIHVIEVEEKGSGRNA-RYKLTSTIMLWL 501
           L+        FAG VL KK    +S    WDSIHV EV    S  ++  Y++T+TI+L L
Sbjct: 130 LNEEDFNGHDFAGVVLFKKN---QSDHSNWDSIHVFEVTTSPSSPDSFNYRVTTTIILHL 186

Query: 502 E----TQNS----------ETEKEVPLSDA-------NNHIVNIGRLVEDMENSIRKQLN 618
           +     QNS          +TEK++ +  +        +H+ N+G L+ED+E+ +R  L 
Sbjct: 187 DKTKTDQNSHMMLSGNLTRQTEKDIAIDMSRPLDVIFTSHVANLGSLIEDIESQMRNLLE 246

Query: 619 DVYFGTSKNLVDSLRSGLSKSVEDQQRKLCQ 711
            VYF  ++++    ++    S  ++  K  Q
Sbjct: 247 TVYFEKTRDIFHQTKNAAIASSAEEANKDAQ 277
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,932,060
Number of Sequences: 369166
Number of extensions: 1963448
Number of successful extensions: 5257
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5217
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7956112725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)