Planaria EST Database


DrC_01339

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01339
         (839 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8K400|STXB5_MOUSE  Syntaxin-binding protein 5 (Tomosyn-1)     119   1e-26
sp|Q5T5C0|STXB5_HUMAN  Syntaxin-binding protein 5 (Tomosyn-1)     117   4e-26
sp|Q9Y2K9|STB5L_HUMAN  Syntaxin binding protein 5-like (Tomo...   115   2e-25
sp|Q5DQR4|STB5L_MOUSE  Syntaxin binding protein 5-like (Tomo...   111   2e-24
sp|Q5SQE2|STB5L_BRARE  Syntaxin binding protein 5-like             99   1e-20
sp|Q8NGI6|OR4DA_HUMAN  Olfactory receptor 4D10 (Olfactory re...    35   0.20 
sp|P08111|L2GL_DROME  Lethal(2) giant larvae protein               33   0.98 
sp|Q57571|Y107_METJA  Hypothetical protein MJ0107                  33   0.98 
sp|Q08470|L2GL_DROPS  Lethal(2) giant larvae protein (P127)        33   1.3  
sp|Q8NGI4|OR4DB_HUMAN  Olfactory receptor 4D11                     31   3.7  
>sp|Q8K400|STXB5_MOUSE Syntaxin-binding protein 5 (Tomosyn-1)
          Length = 1152

 Score =  119 bits (298), Expect = 1e-26
 Identities = 60/141 (42%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
 Frame = +2

Query: 419  INDCQFAVLCSEKNAEVIALPSQSQLYKIKITETSVVLKANVINVKSSPCLVTFLANSHL 598
            I++ Q+AV+CSEK A+V++LP+QS  YK  ITETS VL+ +++ + +S CL  F AN H+
Sbjct: 910  ISENQYAVICSEKQAKVMSLPTQSCAYKQNITETSFVLRGDIVALSNSVCLACFCANGHI 969

Query: 599  MAFSLPSLRLLMDLDSV-LSENWDENALCFANHGLLAYMSSLSEMDKASFSAEITNNIKN 775
            M FSLPSLR L+D+  + L+        CFAN+G   Y+ S +E+ + ++S E   N++ 
Sbjct: 970  MTFSLPSLRPLLDVYYLPLTNMRIARTFCFANNGQALYLVSPTEIQRLTYSQETCENLQE 1029

Query: 776  AQGDLYNQREMPSPPKKGFFE 838
              G+L+   E P  P +GFF+
Sbjct: 1030 MLGELFTPVETPEAPNRGFFK 1050

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 32/59 (54%), Positives = 46/59 (77%), Gaps = 3/59 (5%)
 Frame = +2

Query: 2   PCLWIGTSLGSIIVVNLNIP---DLRTTQPVIVSPSGTVYRLRGSILSISFLDSNGDLL 169
           PCLW+GT++G+  V+ LN+P   + R  QPVIVSPSGT+ RL+G+IL ++FLD+ G L+
Sbjct: 814 PCLWVGTTVGTAFVITLNLPPGPEQRLLQPVIVSPSGTILRLKGAILRMAFLDATGCLM 872
>sp|Q5T5C0|STXB5_HUMAN Syntaxin-binding protein 5 (Tomosyn-1)
          Length = 1151

 Score =  117 bits (293), Expect = 4e-26
 Identities = 59/141 (41%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
 Frame = +2

Query: 419  INDCQFAVLCSEKNAEVIALPSQSQLYKIKITETSVVLKANVINVKSSPCLVTFLANSHL 598
            I++ Q+AV+CSEK A+VI+LP+Q+  YK  ITETS VL+ +++ + +S CL  F AN H+
Sbjct: 909  ISENQYAVICSEKQAKVISLPTQNCAYKQNITETSFVLRGDIVALSNSICLACFCANGHI 968

Query: 599  MAFSLPSLRLLMDLDSV-LSENWDENALCFANHGLLAYMSSLSEMDKASFSAEITNNIKN 775
            M FSLPSLR L+D+  + L+        CF N+G   Y+ S +E+ + ++S E   N++ 
Sbjct: 969  MTFSLPSLRPLLDVYYLPLTNMRIARTFCFTNNGQALYLVSPTEIQRLTYSQETCENLQE 1028

Query: 776  AQGDLYNQREMPSPPKKGFFE 838
              G+L+   E P  P +GFF+
Sbjct: 1029 MLGELFTPVETPEAPNRGFFK 1049

 Score = 73.9 bits (180), Expect = 5e-13
 Identities = 33/59 (55%), Positives = 48/59 (81%), Gaps = 3/59 (5%)
 Frame = +2

Query: 2   PCLWIGTSLGSIIVVNLNIP---DLRTTQPVIVSPSGTVYRLRGSILSISFLDSNGDLL 169
           PCLW+GT+LG+++V+ LN+P   + R  QPVIVSPSGT+ RL+G+IL ++FLD+ G L+
Sbjct: 813 PCLWVGTTLGTVLVIALNLPPGGEQRLLQPVIVSPSGTILRLKGAILRMAFLDTTGCLI 871
>sp|Q9Y2K9|STB5L_HUMAN Syntaxin binding protein 5-like (Tomosyn-2) (LLGL4 homolog)
          Length = 1186

 Score =  115 bits (287), Expect = 2e-25
 Identities = 58/141 (41%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
 Frame = +2

Query: 419  INDCQFAVLCSEKNAEVIALPSQSQLYKIKITETSVVLKANVINVKSSPCLVTFLANSHL 598
            I D Q+ ++CSEK A+V +LPSQ+ LY   ITETS +L+ANV+ + SS CL  F AN H+
Sbjct: 944  IGDHQYTIICSEKQAKVFSLPSQTCLYVHNITETSFILQANVVVMCSSACLACFCANGHI 1003

Query: 599  MAFSLPSLRLLMDLDSV-LSENWDENALCFANHGLLAYMSSLSEMDKASFSAEITNNIKN 775
            M  SLPSLR ++D++ + L++       CF N G   Y+ S +E+ + ++S E+ +N+++
Sbjct: 1004 MIMSLPSLRPMLDVNYLPLTDMRIARTFCFTNEGQALYLVSPTEIQRLTYSQEMCDNLQD 1063

Query: 776  AQGDLYNQREMPSPPKKGFFE 838
              GDL+   E P    +GF +
Sbjct: 1064 MLGDLFTPIETPEAQNRGFLK 1084

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 27/59 (45%), Positives = 44/59 (74%), Gaps = 3/59 (5%)
 Frame = +2

Query: 2    PCLWIGTSLGSIIVVNLNIP---DLRTTQPVIVSPSGTVYRLRGSILSISFLDSNGDLL 169
            PCL++GTSLG +++++LN+P   + R T+PV+V PSGT   L+G++L+ S +D  G L+
Sbjct: 851  PCLFVGTSLGMVLIISLNLPLADEQRFTEPVMVLPSGTFLSLKGAVLTFSCMDRMGGLM 909
>sp|Q5DQR4|STB5L_MOUSE Syntaxin binding protein 5-like (Tomosyn-2)
          Length = 1185

 Score =  111 bits (278), Expect = 2e-24
 Identities = 56/141 (39%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
 Frame = +2

Query: 419  INDCQFAVLCSEKNAEVIALPSQSQLYKIKITETSVVLKANVINVKSSPCLVTFLANSHL 598
            + D Q+ ++CSEK A+V +LPSQ+ LY   ITETS +L+A+V+ + +S CL  F AN H+
Sbjct: 943  MGDHQYTIICSEKQAKVFSLPSQTCLYVHNITETSFILQADVVVMCNSACLACFCANGHI 1002

Query: 599  MAFSLPSLRLLMDLDSV-LSENWDENALCFANHGLLAYMSSLSEMDKASFSAEITNNIKN 775
            M  SLPSLR ++D++ + L++       CF N G   Y+ S +E+ + ++S E+ +NI++
Sbjct: 1003 MIMSLPSLRPMLDVNYLPLTDMRIARTFCFTNEGQALYLVSPTEIQRLTYSQEMCDNIQD 1062

Query: 776  AQGDLYNQREMPSPPKKGFFE 838
              GDL+   E P    +GF +
Sbjct: 1063 MLGDLFTPIETPEAQNRGFLK 1083

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 27/59 (45%), Positives = 44/59 (74%), Gaps = 3/59 (5%)
 Frame = +2

Query: 2    PCLWIGTSLGSIIVVNLNIP---DLRTTQPVIVSPSGTVYRLRGSILSISFLDSNGDLL 169
            PCL++GTSLG +++++LN+P   + R T+PV+V PSGT   L+G++L+ S +D  G L+
Sbjct: 850  PCLFVGTSLGMVVLISLNLPSSDEQRFTEPVVVLPSGTFLSLKGAVLTFSCMDRTGSLM 908
>sp|Q5SQE2|STB5L_BRARE Syntaxin binding protein 5-like
          Length = 1159

 Score = 99.4 bits (246), Expect = 1e-20
 Identities = 54/143 (37%), Positives = 84/143 (58%), Gaps = 1/143 (0%)
 Frame = +2

Query: 413  DTINDCQFAVLCSEKNAEVIALPSQSQLYKIKITETSVVLKANVINVKSSPCLVTFLANS 592
            +   D   AV+CSE+ A+V  +PSQ+ LY   ITE+S VL+A+V++V +S CL  F AN 
Sbjct: 919  EACGDGHLAVVCSERQAKVFYMPSQACLYVHNITESSFVLRADVVSVSNSVCLACFCANG 978

Query: 593  HLMAFSLPSLRLLMDLDSV-LSENWDENALCFANHGLLAYMSSLSEMDKASFSAEITNNI 769
            H+M  SLPSLR L+D+  + L++       CF N G   Y+ S +E+ + ++S E+   +
Sbjct: 979  HIMILSLPSLRPLLDVSYLPLTDMRIARTFCFTNGGQALYLCSPTEIQRITYSQEMCETL 1038

Query: 770  KNAQGDLYNQREMPSPPKKGFFE 838
                G+L+   E P    +GF +
Sbjct: 1039 ----GELFTPIETPEAQNRGFLK 1057

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
 Frame = +2

Query: 2    PCLWIGTSLGSIIVVNLNIP---DLRTTQPVIVSPSGTVYRLRGSILSISFLDSNGDLL 169
            PCLW+GTSLG ++++ ++IP     R   PV V+P+GTV  L+GS+L   FLD  G L+
Sbjct: 827  PCLWVGTSLGLVLIIPMSIPTDEQERQEDPVTVAPTGTVLMLKGSVLRFGFLDCGGALI 885
>sp|Q8NGI6|OR4DA_HUMAN Olfactory receptor 4D10 (Olfactory receptor OR11-251)
          Length = 311

 Score = 35.4 bits (80), Expect = 0.20
 Identities = 29/90 (32%), Positives = 39/90 (43%)
 Frame = -3

Query: 555 FTFITLAFNTTLVSVILILYNCDCEGRAITSAFFSEHNTAN*QSFMVSVITSFCKLVPLL 376
           F F+ L + TTL+  +LI+    CE R  T  +F  HN +       S IT    LV LL
Sbjct: 28  FLFLLLVYVTTLLGNLLIMVTVTCESRLHTPMYFLLHNLSI-ADICFSSITVPKVLVDLL 86

Query: 375 DTRTNPKLLLLLDTVDCFET*FIFFEVIGV 286
             R        +    CF   F+F  + GV
Sbjct: 87  SERKT------ISFNHCFTQMFLFHLIGGV 110
>sp|P08111|L2GL_DROME Lethal(2) giant larvae protein
          Length = 1161

 Score = 33.1 bits (74), Expect = 0.98
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = +2

Query: 509  ITETSVVLKANVINVKSSPCLVTFLANSHLMAFSLPSLRLLMDLDSVLSENWDE-NALCF 685
            I+ +  V + +V N  +  CL        +M  S+P L+  ++  +V  E+ +  ++LCF
Sbjct: 886  ISGSLAVSRGDVYNETALICLTNM---GDIMVLSVPELKRQLNAAAVRREDINGVSSLCF 942

Query: 686  ANHGLLAYMSSLSEMDKASFS 748
             N G   YM S SE+ + + +
Sbjct: 943  TNSGEALYMMSSSELQRIALA 963
>sp|Q57571|Y107_METJA Hypothetical protein MJ0107
          Length = 525

 Score = 33.1 bits (74), Expect = 0.98
 Identities = 34/125 (27%), Positives = 58/125 (46%)
 Frame = -3

Query: 375 DTRTNPKLLLLLDTVDCFET*FIFFEVIGVGLAVSFXXXXXLIDELDPYDVLDGNLVSGV 196
           D   NP   + +DT++  E      E I +G  +        +DEL PY + D    + V
Sbjct: 215 DLTDNP---ISVDTLNTKE----LIEAINLGADMILSVDAGNLDELIPY-LKDSE--TAV 264

Query: 195 VVLPTDFATSKSPFESKNEIESIDPRSR*TVPLGDTITG*VVLRSGIFKLTTIIDPRLVP 16
           VVLPT++ T+  P   + +I+S++   +             ++ +GI K+  + DP L P
Sbjct: 265 VVLPTNYKTNYVPETIEGKIKSLEENIK------------KLIDAGIEKI--VADPILEP 310

Query: 15  IHKQG 1
           I+  G
Sbjct: 311 INNAG 315
>sp|Q08470|L2GL_DROPS Lethal(2) giant larvae protein (P127)
          Length = 1166

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = +2

Query: 509  ITETSVVLKANVINVKSSPCLVTFLANSHLMAFSLPSLRLLMDLDSVLSENWDE-NALCF 685
            ++ TS   + ++ +  +  CL        +M  S+P L+  ++  +V  E+ +  ++LCF
Sbjct: 888  VSATSAAGRGDLYHEMALICLTNM---GDIMVLSVPELKRQLNAAAVRREDINGISSLCF 944

Query: 686  ANHGLLAYMSSLSEMDKASFS 748
             N G   YM S SE+ + + S
Sbjct: 945  TNDGEALYMMSSSELQRIALS 965
>sp|Q8NGI4|OR4DB_HUMAN Olfactory receptor 4D11
          Length = 311

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -3

Query: 555 FTFITLAFNTTLVSVILILYNCDCEGRAITSAFFSEHNTA 436
           F F+ L + TTL+  +LI+    CE R  T  +F   N A
Sbjct: 28  FLFLCLVYMTTLLGNLLIMVTVTCESRLHTPMYFLLRNLA 67
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,609,292
Number of Sequences: 369166
Number of extensions: 1897712
Number of successful extensions: 4466
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4456
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8197207050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)