Planaria EST Database


DrC_01216

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01216
         (804 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P68372|TBBX_MOUSE  Tubulin beta-? chain >gi|55977480|sp|P...   503   e-142
sp|P11833|TBB_PARLI  Tubulin beta chain (Beta tubulin)            503   e-142
sp|P30883|TBB4_XENLA  Tubulin beta-4 chain                        501   e-142
sp|P09206|TBB3_CHICK  Tubulin beta-3 chain (Beta-tubulin cla...   500   e-141
sp|Q7JJU6|TBB2_PANTR  Tubulin beta-2 chain >gi|56754798|sp|P...   500   e-141
sp|P32882|TBB2_CHICK  Tubulin beta-2 chain (Beta-tubulin cla...   497   e-140
sp|Q9NFZ6|TBB2_ECHMU  Tubulin beta-2 chain (Beta-tubulin 2)       496   e-140
sp|Q9D6F9|TBB4_MOUSE  Tubulin beta-4 chain                        496   e-140
sp|P13602|TBB2_XENLA  Tubulin beta-2 chain (Beta-2 tubulin)       496   e-140
sp|P02554|TBB_PIG  Tubulin beta chain                             496   e-140
>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
 sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
          Length = 445

 Score =  503 bits (1296), Expect = e-142
 Identities = 243/267 (91%), Positives = 248/267 (92%)
 Frame = +2

Query: 2   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
           IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA
Sbjct: 4   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 63

Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
           +LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64  VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
           AESCDCLQGFQ                   KIREEYPDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
           NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
           GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
          Length = 447

 Score =  503 bits (1294), Expect = e-142
 Identities = 242/267 (90%), Positives = 248/267 (92%)
 Frame = +2

Query: 2   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
           IVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA
Sbjct: 4   IVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 63

Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
           +LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64  VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
           AESCDCLQGFQ                   KIREEYPDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
           NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
           GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
          Length = 445

 Score =  501 bits (1291), Expect = e-142
 Identities = 242/267 (90%), Positives = 247/267 (92%)
 Frame = +2

Query: 2   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
           IVHLQAGQCGNQIGAKFWEVISDEHGIDPTG YHGDSDLQLERINVYYNEATGGKYVPRA
Sbjct: 4   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGAYHGDSDLQLERINVYYNEATGGKYVPRA 63

Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
           +LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64  VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
           AESCDCLQGFQ                   KIREEYPDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
           NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
           GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|P09206|TBB3_CHICK Tubulin beta-3 chain (Beta-tubulin class-IV)
          Length = 445

 Score =  500 bits (1288), Expect = e-141
 Identities = 242/267 (90%), Positives = 247/267 (92%)
 Frame = +2

Query: 2   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
           IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA
Sbjct: 4   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 63

Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
           +LVDLEPGTMDSVR+GPF Q+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64  VLVDLEPGTMDSVRSGPFRQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
           AESCDCLQGFQ                   KIREEYPDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
           NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
           GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
 sp|P69895|TBB2_MACMU Tubulin beta-2 chain
 sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
 sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
 sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
 sp|P69897|TBB5_RAT Tubulin beta-5 chain
 sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
           tubulin)
          Length = 444

 Score =  500 bits (1287), Expect = e-141
 Identities = 241/267 (90%), Positives = 248/267 (92%)
 Frame = +2

Query: 2   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
           IVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYVPRA
Sbjct: 4   IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRA 63

Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
           ILVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64  ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
           AESCDCLQGFQ                   KIREEYPDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
           NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
           GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin class-II)
          Length = 445

 Score =  497 bits (1279), Expect = e-140
 Identities = 239/267 (89%), Positives = 247/267 (92%)
 Frame = +2

Query: 2   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
           IVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYVPRA
Sbjct: 4   IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRA 63

Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
           ILVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64  ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
           +ESCDCLQGFQ                   KIREEYPDRIM+TFSV+PSPKVSDTVVEPY
Sbjct: 124 SESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPY 183

Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
           NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
           GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|Q9NFZ6|TBB2_ECHMU Tubulin beta-2 chain (Beta-tubulin 2)
          Length = 445

 Score =  496 bits (1278), Expect = e-140
 Identities = 239/267 (89%), Positives = 246/267 (92%)
 Frame = +2

Query: 2   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
           IVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GGKYVPRA
Sbjct: 4   IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRA 63

Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
           ILVDLEPGTMDSVRAGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV+RKE
Sbjct: 64  ILVDLEPGTMDSVRAGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKE 123

Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
           AESCDCLQGFQ                   KIREEYPDRIM T+SVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPY 183

Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
           NATLSVHQLVENTDETYCIDNEALYDICFRTLKL+ PTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSNPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
           GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|Q9D6F9|TBB4_MOUSE Tubulin beta-4 chain
          Length = 444

 Score =  496 bits (1278), Expect = e-140
 Identities = 239/266 (89%), Positives = 246/266 (92%)
 Frame = +2

Query: 2   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
           IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG YVPRA
Sbjct: 4   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRA 63

Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
           +LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE
Sbjct: 64  VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKE 123

Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
           AESCDCLQGFQ                   KIREE+PDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
           NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPG 799
           GQLNADLRKLAVNMVPFPRLHFF+PG
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPG 269
>sp|P13602|TBB2_XENLA Tubulin beta-2 chain (Beta-2 tubulin)
          Length = 443

 Score =  496 bits (1277), Expect = e-140
 Identities = 239/267 (89%), Positives = 247/267 (92%)
 Frame = +2

Query: 2   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
           IVHLQAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG K+VPRA
Sbjct: 4   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKFVPRA 63

Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
           ILVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64  ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
           +ESCDCLQGFQ                   KIREEYPDRIM+TFSV+PSPKVSDTVVEPY
Sbjct: 124 SESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPY 183

Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
           NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
           GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|P02554|TBB_PIG Tubulin beta chain
          Length = 445

 Score =  496 bits (1277), Expect = e-140
 Identities = 239/267 (89%), Positives = 246/267 (92%)
 Frame = +2

Query: 2   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
           IVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA G KYVPRA
Sbjct: 4   IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRA 63

Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
           ILVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64  ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
           +ESCDCLQGFQ                   KIREEYPDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 SESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
           NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
           GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,703,251
Number of Sequences: 369166
Number of extensions: 1797161
Number of successful extensions: 5653
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5093
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7618580670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)