Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_01216
(804 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P68372|TBBX_MOUSE Tubulin beta-? chain >gi|55977480|sp|P... 503 e-142
sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin) 503 e-142
sp|P30883|TBB4_XENLA Tubulin beta-4 chain 501 e-142
sp|P09206|TBB3_CHICK Tubulin beta-3 chain (Beta-tubulin cla... 500 e-141
sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain >gi|56754798|sp|P... 500 e-141
sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin cla... 497 e-140
sp|Q9NFZ6|TBB2_ECHMU Tubulin beta-2 chain (Beta-tubulin 2) 496 e-140
sp|Q9D6F9|TBB4_MOUSE Tubulin beta-4 chain 496 e-140
sp|P13602|TBB2_XENLA Tubulin beta-2 chain (Beta-2 tubulin) 496 e-140
sp|P02554|TBB_PIG Tubulin beta chain 496 e-140
>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
Length = 445
Score = 503 bits (1296), Expect = e-142
Identities = 243/267 (91%), Positives = 248/267 (92%)
Frame = +2
Query: 2 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA
Sbjct: 4 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 63
Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
+LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64 VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123
Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
AESCDCLQGFQ KIREEYPDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183
Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243
Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
Length = 447
Score = 503 bits (1294), Expect = e-142
Identities = 242/267 (90%), Positives = 248/267 (92%)
Frame = +2
Query: 2 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
IVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA
Sbjct: 4 IVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 63
Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
+LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64 VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123
Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
AESCDCLQGFQ KIREEYPDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183
Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243
Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
Length = 445
Score = 501 bits (1291), Expect = e-142
Identities = 242/267 (90%), Positives = 247/267 (92%)
Frame = +2
Query: 2 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
IVHLQAGQCGNQIGAKFWEVISDEHGIDPTG YHGDSDLQLERINVYYNEATGGKYVPRA
Sbjct: 4 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGAYHGDSDLQLERINVYYNEATGGKYVPRA 63
Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
+LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64 VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123
Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
AESCDCLQGFQ KIREEYPDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183
Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243
Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|P09206|TBB3_CHICK Tubulin beta-3 chain (Beta-tubulin class-IV)
Length = 445
Score = 500 bits (1288), Expect = e-141
Identities = 242/267 (90%), Positives = 247/267 (92%)
Frame = +2
Query: 2 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA
Sbjct: 4 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 63
Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
+LVDLEPGTMDSVR+GPF Q+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64 VLVDLEPGTMDSVRSGPFRQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123
Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
AESCDCLQGFQ KIREEYPDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183
Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243
Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
sp|P69895|TBB2_MACMU Tubulin beta-2 chain
sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
sp|P69897|TBB5_RAT Tubulin beta-5 chain
sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
tubulin)
Length = 444
Score = 500 bits (1287), Expect = e-141
Identities = 241/267 (90%), Positives = 248/267 (92%)
Frame = +2
Query: 2 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
IVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYVPRA
Sbjct: 4 IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRA 63
Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
ILVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64 ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123
Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
AESCDCLQGFQ KIREEYPDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183
Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243
Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin class-II)
Length = 445
Score = 497 bits (1279), Expect = e-140
Identities = 239/267 (89%), Positives = 247/267 (92%)
Frame = +2
Query: 2 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
IVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYVPRA
Sbjct: 4 IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRA 63
Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
ILVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64 ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123
Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
+ESCDCLQGFQ KIREEYPDRIM+TFSV+PSPKVSDTVVEPY
Sbjct: 124 SESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPY 183
Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243
Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|Q9NFZ6|TBB2_ECHMU Tubulin beta-2 chain (Beta-tubulin 2)
Length = 445
Score = 496 bits (1278), Expect = e-140
Identities = 239/267 (89%), Positives = 246/267 (92%)
Frame = +2
Query: 2 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
IVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GGKYVPRA
Sbjct: 4 IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRA 63
Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
ILVDLEPGTMDSVRAGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV+RKE
Sbjct: 64 ILVDLEPGTMDSVRAGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKE 123
Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
AESCDCLQGFQ KIREEYPDRIM T+SVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPY 183
Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
NATLSVHQLVENTDETYCIDNEALYDICFRTLKL+ PTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSNPTYGDLNHLVSATMSGVTTCLRFP 243
Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|Q9D6F9|TBB4_MOUSE Tubulin beta-4 chain
Length = 444
Score = 496 bits (1278), Expect = e-140
Identities = 239/266 (89%), Positives = 246/266 (92%)
Frame = +2
Query: 2 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG YVPRA
Sbjct: 4 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRA 63
Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
+LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE
Sbjct: 64 VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKE 123
Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
AESCDCLQGFQ KIREE+PDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVVEPY 183
Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243
Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPG 799
GQLNADLRKLAVNMVPFPRLHFF+PG
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPG 269
>sp|P13602|TBB2_XENLA Tubulin beta-2 chain (Beta-2 tubulin)
Length = 443
Score = 496 bits (1277), Expect = e-140
Identities = 239/267 (89%), Positives = 247/267 (92%)
Frame = +2
Query: 2 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
IVHLQAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG K+VPRA
Sbjct: 4 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKFVPRA 63
Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
ILVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64 ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123
Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
+ESCDCLQGFQ KIREEYPDRIM+TFSV+PSPKVSDTVVEPY
Sbjct: 124 SESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPY 183
Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243
Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
>sp|P02554|TBB_PIG Tubulin beta chain
Length = 445
Score = 496 bits (1277), Expect = e-140
Identities = 239/267 (89%), Positives = 246/267 (92%)
Frame = +2
Query: 2 IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 181
IVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA G KYVPRA
Sbjct: 4 IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRA 63
Query: 182 ILVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 361
ILVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE
Sbjct: 64 ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123
Query: 362 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMSTFSVVPSPKVSDTVVEPY 541
+ESCDCLQGFQ KIREEYPDRIM+TFSVVPSPKVSDTVVEPY
Sbjct: 124 SESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183
Query: 542 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 721
NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243
Query: 722 GQLNADLRKLAVNMVPFPRLHFFIPGF 802
GQLNADLRKLAVNMVPFPRLHFF+PGF
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGF 270
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,703,251
Number of Sequences: 369166
Number of extensions: 1797161
Number of successful extensions: 5653
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5093
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7618580670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)