Planaria EST Database


DrC_01169

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01169
         (851 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P81900|KAPR2_DROME  cAMP-dependent protein kinase type II...   239   5e-63
sp|P00515|KAP2_BOVIN  cAMP-dependent protein kinase type II-...   227   4e-59
sp|P13861|KAP2_HUMAN  cAMP-dependent protein kinase type II-...   227   4e-59
sp|P12368|KAP2_RAT  cAMP-dependent protein kinase type II-al...   222   1e-57
sp|P31322|KAP3_BOVIN  cAMP-dependent protein kinase type II-...   221   3e-57
sp|P12369|KAP3_RAT  cAMP-dependent protein kinase type II-be...   220   4e-57
sp|P31323|KAP3_HUMAN  cAMP-dependent protein kinase type II-...   218   1e-56
sp|P12367|KAP2_MOUSE  cAMP-dependent protein kinase type II-...   217   3e-56
sp|P31324|KAP3_MOUSE  cAMP-dependent protein kinase type II-...   217   3e-56
sp|Q26619|KAPR_STRPU  cAMP-dependent protein kinase type II ...   217   4e-56
>sp|P81900|KAPR2_DROME cAMP-dependent protein kinase type II regulatory subunit
          Length = 377

 Score =  239 bits (611), Expect = 5e-63
 Identities = 127/281 (45%), Positives = 190/281 (67%), Gaps = 2/281 (0%)
 Frame = +1

Query: 4   FDPASVDNETFEKNRKIFPKTPKQLDKIREILQTNFLFNCLDEEQLAKVVQSMFYIDVLQ 183
           +DP + D++  +    +FPKT +Q  ++ E ++   LF  L++EQ+ +V+ +MF   V  
Sbjct: 90  YDPEADDDD--DGATAVFPKTDEQRARLVESVKNVLLFRSLEKEQMNQVLDAMFERKVQP 147

Query: 184 GDVIIKENDPGDNFYVIDYGTFTASNQIKTIYEKYENEGSFGELALMYNCPRVASIIANT 363
           GD II++ D GDNFYVI+ G +      K I   Y + G FGELAL+YN PR A++ A T
Sbjct: 148 GDFIIRQGDDGDNFYVIESGVYKVYINDKHI-NTYNHTGLFGELALLYNMPRAATVQAET 206

Query: 364 DGGLWAIDRITFRQLILKGAYQKRKRYQDFIKSVPILQELIDYDQCNLADALKTIIVNN- 540
            G LWA+DR TFR+++LK A++KRK Y++ + SVP+L+ L +Y++ NLADAL +   +N 
Sbjct: 207 SGLLWAMDRQTFRRILLKSAFRKRKMYEELLNSVPMLKALQNYERMNLADALVSKSYDNG 266

Query: 541 EKILTEGESGDRMYFIEEGEVLVTTNSEDGENEVGRLKAGDYFGEVAILANIPRIANVYA 720
           E+I+ +G++ D MYFIEEG V V  + +D E E+ +L  G YFGE+A++ + PR A+VYA
Sbjct: 267 ERIIKQGDAADGMYFIEEGTVSVRMDQDDAEVEISQLGKGQYFGELALVTHRPRAASVYA 326

Query: 721 I-GVTKLAELDVKCYTRLMGPCIDRMRKHFLKYRNQLEKLF 840
             GV KLA LDVK + RL+GPC+D M+++   Y +QL K+F
Sbjct: 327 TGGVVKLAFLDVKAFERLLGPCMDIMKRNIDDYESQLVKIF 367
>sp|P00515|KAP2_BOVIN cAMP-dependent protein kinase type II-alpha regulatory subunit
          Length = 400

 Score =  227 bits (578), Expect = 4e-59
 Identities = 119/281 (42%), Positives = 181/281 (64%), Gaps = 13/281 (4%)
 Frame = +1

Query: 46  RKIFPKTPKQLDKIREILQTNFLFNCLDEEQLAKVVQSMFYIDVLQGDVIIKENDPGDNF 225
           R I PKT +Q  +++E  +   LF  LD EQL++V+ +MF   V   + +I + D GDNF
Sbjct: 113 RVIHPKTDQQRCRLQEACKDILLFKNLDPEQLSQVLDAMFERTVKVDEHVIDQGDDGDNF 172

Query: 226 YVIDYGTF----TASNQIKTIYEKYENEGSFGELALMYNCPRVASIIANTDGGLWAIDRI 393
           YVI+ GT+    T  NQ +++ + Y+N GSFGELALMYN PR A+I+A ++G LW +DR+
Sbjct: 173 YVIERGTYDILVTKDNQTRSVGQ-YDNHGSFGELALMYNTPRAATIVATSEGSLWGLDRV 231

Query: 394 TFRQLILKGAYQKRKRYQDFIKSVPILQELIDYDQCNLADAL-KTIIVNNEKILTEGESG 570
           TFR++I+K   +KRK ++ FI+SVP+L+ L   ++  + D + + +  + E+I+T+GE  
Sbjct: 232 TFRRIIVKNNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIGEKVYKDGERIITQGEKA 291

Query: 571 DRMYFIEEGEVLV-----TTNSEDGEN---EVGRLKAGDYFGEVAILANIPRIANVYAIG 726
           D  Y IE GEV +     T  ++DGEN   E+ R   G YFGE+A++ N PR A+ YA+G
Sbjct: 292 DSFYIIESGEVSILIKSKTKVNKDGENQEVEIARCHKGQYFGELALVTNKPRAASAYAVG 351

Query: 727 VTKLAELDVKCYTRLMGPCIDRMRKHFLKYRNQLEKLFTKS 849
             K   +DV+ + RL+GPC+D M+++   Y  QL K+F  S
Sbjct: 352 DVKCLVMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFGSS 392
>sp|P13861|KAP2_HUMAN cAMP-dependent protein kinase type II-alpha regulatory subunit
          Length = 404

 Score =  227 bits (578), Expect = 4e-59
 Identities = 119/281 (42%), Positives = 182/281 (64%), Gaps = 13/281 (4%)
 Frame = +1

Query: 46  RKIFPKTPKQLDKIREILQTNFLFNCLDEEQLAKVVQSMFYIDVLQGDVIIKENDPGDNF 225
           R I PKT +Q  +++E  +   LF  LD+EQL++V+ +MF   V   + +I + D GDNF
Sbjct: 117 RVIHPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFERIVKADEHVIDQGDDGDNF 176

Query: 226 YVIDYGTF----TASNQIKTIYEKYENEGSFGELALMYNCPRVASIIANTDGGLWAIDRI 393
           YVI+ GT+    T  NQ +++ + Y+N GSFGELALMYN PR A+I+A ++G LW +DR+
Sbjct: 177 YVIERGTYDILVTKDNQTRSVGQ-YDNRGSFGELALMYNTPRAATIVATSEGSLWGLDRV 235

Query: 394 TFRQLILKGAYQKRKRYQDFIKSVPILQELIDYDQCNLADAL-KTIIVNNEKILTEGESG 570
           TFR++I+K   +KRK ++ FI+SVP+L+ L   ++  + D + + I  + E+I+T+GE  
Sbjct: 236 TFRRIIVKNNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIGEKIYKDGERIITQGEKA 295

Query: 571 DRMYFIEEGEVLV-----TTNSEDGEN---EVGRLKAGDYFGEVAILANIPRIANVYAIG 726
           D  Y IE GEV +     T +++DG N   E+ R   G YFGE+A++ N PR A+ YA+G
Sbjct: 296 DSFYIIESGEVSILIRSRTKSNKDGGNQEVEIARCHKGQYFGELALVTNKPRAASAYAVG 355

Query: 727 VTKLAELDVKCYTRLMGPCIDRMRKHFLKYRNQLEKLFTKS 849
             K   +DV+ + RL+GPC+D M+++   Y  QL K+F  S
Sbjct: 356 DVKCLVMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFGSS 396
>sp|P12368|KAP2_RAT cAMP-dependent protein kinase type II-alpha regulatory subunit
          Length = 370

 Score =  222 bits (565), Expect = 1e-57
 Identities = 118/286 (41%), Positives = 177/286 (61%), Gaps = 13/286 (4%)
 Frame = +1

Query: 22  DNETFEKNRKIFPKTPKQLDKIREILQTNFLFNCLDEEQLAKVVQSMFYIDVLQGDVIIK 201
           D E     R + PKT +Q  +++E  +   LF  LD+EQL++V+ +MF   V   + +I 
Sbjct: 75  DEEEDNDPRVVHPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFKRIVKTDEHVID 134

Query: 202 ENDPGDNFYVIDYGTF----TASNQIKTIYEKYENEGSFGELALMYNCPRVASIIANTDG 369
           + D GDNFYVI+ GT+    T  NQ +++ + Y N GSFGELALMYN PR A+I+A +DG
Sbjct: 135 QGDDGDNFYVIERGTYDILVTKDNQTRSVGQ-YANRGSFGELALMYNTPRAATIVATSDG 193

Query: 370 GLWAIDRITFRQLILKGAYQKRKRYQDFIKSVPILQELIDYDQCNLADAL-KTIIVNNEK 546
            LW +DR+TFR++I+K   +KRK ++ FI+SVP+ + L   ++  + D + + I  + E+
Sbjct: 194 SLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLFKSLEMSERMKIVDVIGEKIYKDGER 253

Query: 547 ILTEGESGDRMYFIEEGEVLV------TTNSEDG--ENEVGRLKAGDYFGEVAILANIPR 702
           I+T+GE  D  Y IE GEV +       TN   G  E E+     G YFGE+A++ N PR
Sbjct: 254 IITQGEKADSFYIIESGEVSILIRSKTKTNKNGGNQEVEIAHCHKGQYFGELALVTNKPR 313

Query: 703 IANVYAIGVTKLAELDVKCYTRLMGPCIDRMRKHFLKYRNQLEKLF 840
            A+ YA+G  K   +DV+ + RL+GPC+D M+++   Y  QL K+F
Sbjct: 314 AASAYAVGDVKCLVMDVQAFERLLGPCMDIMKRNISHYEEQLVKMF 359
>sp|P31322|KAP3_BOVIN cAMP-dependent protein kinase type II-beta regulatory subunit
          Length = 418

 Score =  221 bits (562), Expect = 3e-57
 Identities = 114/284 (40%), Positives = 175/284 (61%), Gaps = 11/284 (3%)
 Frame = +1

Query: 22  DNETFEKNRKIFPKTPKQLDKIREILQTNFLFNCLDEEQLAKVVQSMFYIDVLQGDVIIK 201
           + E   ++R I PKT  Q ++++E  +   LF  LD EQ+++V+ +MF   V +G+ +I 
Sbjct: 124 EEEDDAESRIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVID 183

Query: 202 ENDPGDNFYVIDYGTF---TASNQIKTIYEKYENEGSFGELALMYNCPRVASIIANTDGG 372
           + D GDNFYVID GTF      + +      Y+N GSFGELALMYN PR A+I A + G 
Sbjct: 184 QGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGA 243

Query: 373 LWAIDRITFRQLILKGAYQKRKRYQDFIKSVPILQELIDYDQCNLADALKTIIVNN-EKI 549
           LW +DR+TFR++I+K   +KRK Y+ FI+S+P L+ L   ++  + D + T + N+ E+I
Sbjct: 244 LWGLDRVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQI 303

Query: 550 LTEGESGDRMYFIEEGEVLVTTN-------SEDGENEVGRLKAGDYFGEVAILANIPRIA 708
           + +G+S D  + +E GEV +T          E+G  E+ R   G YFGE+A++ N PR A
Sbjct: 304 IAQGDSADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCSRGQYFGELALVTNKPRAA 363

Query: 709 NVYAIGVTKLAELDVKCYTRLMGPCIDRMRKHFLKYRNQLEKLF 840
           + +AIG  K   +DV+ + RL+GPC++ M+++   Y  QL  LF
Sbjct: 364 SAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNIATYEEQLVALF 407
>sp|P12369|KAP3_RAT cAMP-dependent protein kinase type II-beta regulatory subunit
          Length = 416

 Score =  220 bits (560), Expect = 4e-57
 Identities = 114/284 (40%), Positives = 175/284 (61%), Gaps = 11/284 (3%)
 Frame = +1

Query: 22  DNETFEKNRKIFPKTPKQLDKIREILQTNFLFNCLDEEQLAKVVQSMFYIDVLQGDVIIK 201
           + E   ++R I PKT  Q ++++E  +   LF  LD EQ+++V+ +MF   V +G+ +I 
Sbjct: 122 EEEDDAESRIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVID 181

Query: 202 ENDPGDNFYVIDYGTF---TASNQIKTIYEKYENEGSFGELALMYNCPRVASIIANTDGG 372
           + D GDNFYVID GTF      + +      Y+N GSFGELALMYN PR A+I A + G 
Sbjct: 182 QGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGA 241

Query: 373 LWAIDRITFRQLILKGAYQKRKRYQDFIKSVPILQELIDYDQCNLADALKTIIVNN-EKI 549
           LW +DR+TFR++I+K   +KRK Y+ FI+S+P L+ L   ++  + D + T + N+ E+I
Sbjct: 242 LWGLDRVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQI 301

Query: 550 LTEGESGDRMYFIEEGEVLVTTN-------SEDGENEVGRLKAGDYFGEVAILANIPRIA 708
           + +G+S D  + +E GEV +T          E+G  E+ R   G YFGE+A++ N PR A
Sbjct: 302 IAQGDSADSFFIVESGEVRITMKRKGKSDIEENGAVEIARCLRGQYFGELALVTNKPRAA 361

Query: 709 NVYAIGVTKLAELDVKCYTRLMGPCIDRMRKHFLKYRNQLEKLF 840
           + +AIG  K   +DV+ + RL+GPC++ M+++   Y  QL  LF
Sbjct: 362 SAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNIATYEEQLVALF 405
>sp|P31323|KAP3_HUMAN cAMP-dependent protein kinase type II-beta regulatory subunit
          Length = 418

 Score =  218 bits (556), Expect = 1e-56
 Identities = 114/284 (40%), Positives = 174/284 (61%), Gaps = 11/284 (3%)
 Frame = +1

Query: 22  DNETFEKNRKIFPKTPKQLDKIREILQTNFLFNCLDEEQLAKVVQSMFYIDVLQGDVIIK 201
           + E   ++R I PKT  Q ++++E  +   LF  LD EQ+++V+ +MF   V  G+ +I 
Sbjct: 124 EEEDDAESRIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKDGEHVID 183

Query: 202 ENDPGDNFYVIDYGTF---TASNQIKTIYEKYENEGSFGELALMYNCPRVASIIANTDGG 372
           + D GDNFYVID GTF      + +      Y+N GSFGELALMYN PR A+I A + G 
Sbjct: 184 QGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGA 243

Query: 373 LWAIDRITFRQLILKGAYQKRKRYQDFIKSVPILQELIDYDQCNLADALKTIIVNN-EKI 549
           LW +DR+TFR++I+K   +KRK Y+ FI+S+P L+ L   ++  + D + T + N+ E+I
Sbjct: 244 LWGLDRVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEFSERLKVVDVIGTKVYNDGEQI 303

Query: 550 LTEGESGDRMYFIEEGEVLVTTN-------SEDGENEVGRLKAGDYFGEVAILANIPRIA 708
           + +G+S D  + +E GEV +T          E+G  E+ R   G YFGE+A++ N PR A
Sbjct: 304 IAQGDSADSFFIVESGEVKITMKRKGKSEVEENGAVEMPRCSRGQYFGELALVTNKPRAA 363

Query: 709 NVYAIGVTKLAELDVKCYTRLMGPCIDRMRKHFLKYRNQLEKLF 840
           + +AIG  K   +DV+ + RL+GPC++ M+++   Y  QL  LF
Sbjct: 364 SAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNIATYEEQLVALF 407
>sp|P12367|KAP2_MOUSE cAMP-dependent protein kinase type II-alpha regulatory subunit
          Length = 401

 Score =  217 bits (553), Expect = 3e-56
 Identities = 113/278 (40%), Positives = 177/278 (63%), Gaps = 13/278 (4%)
 Frame = +1

Query: 46  RKIFPKTPKQLDKIREILQTNFLFNCLDEEQLAKVVQSMFYIDVLQGDVIIKENDPGDNF 225
           R + PKT +Q  +++E  +   LF  LD+EQL++V+ +MF   V   + +I + D GDNF
Sbjct: 114 RVVHPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFEKIVKTDEHVIDQGDDGDNF 173

Query: 226 YVIDYGTF----TASNQIKTIYEKYENEGSFGELALMYNCPRVASIIANTDGGLWAIDRI 393
           YVI+ GT+    T  NQ +++ + Y+N GSFGELALMYN PR A+IIA ++G LW +DR+
Sbjct: 174 YVIERGTYDILVTKDNQTRSVGQ-YDNRGSFGELALMYNTPRAATIIATSEGSLWGLDRV 232

Query: 394 TFRQLILKGAYQKRKRYQDFIKSVPILQELIDYDQCNLADAL-KTIIVNNEKILTEGESG 570
           TFR++I+K   +KRK ++ FI+SVP+ + L   ++  + D + + I  + E+I+ +GE  
Sbjct: 233 TFRRIIVKNNAKKRKMFESFIESVPLFKSLEMSERMKIVDVIGEKIYKDGERIIAQGEKA 292

Query: 571 DRMYFIEEGEVLV-----TTNSEDGEN---EVGRLKAGDYFGEVAILANIPRIANVYAIG 726
           D  Y IE GEV +     T ++++G N   E+     G YFGE+A++ N PR A+ Y +G
Sbjct: 293 DSFYIIESGEVSILIRSKTKSNKNGGNQEVEIAHCHKGQYFGELALVTNKPRAASAYGVG 352

Query: 727 VTKLAELDVKCYTRLMGPCIDRMRKHFLKYRNQLEKLF 840
             K   +DV+ + RL+GPC+D M+++   Y  QL K+F
Sbjct: 353 DVKCLVMDVQAFERLLGPCMDIMKRNISHYEEQLVKMF 390
>sp|P31324|KAP3_MOUSE cAMP-dependent protein kinase type II-beta regulatory subunit
          Length = 416

 Score =  217 bits (553), Expect = 3e-56
 Identities = 113/284 (39%), Positives = 174/284 (61%), Gaps = 11/284 (3%)
 Frame = +1

Query: 22  DNETFEKNRKIFPKTPKQLDKIREILQTNFLFNCLDEEQLAKVVQSMFYIDVLQGDVIIK 201
           + E   ++R I PKT  Q ++++E  +   LF  LD EQ+++V+ +MF   V +G+ +I 
Sbjct: 122 EEEDDAESRIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVID 181

Query: 202 ENDPGDNFYVIDYGTF---TASNQIKTIYEKYENEGSFGELALMYNCPRVASIIANTDGG 372
           + D GDNFYVID GTF      + +      Y+N GSFGELALMYN PR A+I A + G 
Sbjct: 182 QGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGA 241

Query: 373 LWAIDRITFRQLILKGAYQKRKRYQDFIKSVPILQELIDYDQCNLADALKTIIVNN-EKI 549
           LW +DR+TFR++I+K   +KRK Y+ FI+S+P L+ L   ++  + D + T + N+ E+I
Sbjct: 242 LWGLDRVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQI 301

Query: 550 LTEGESGDRMYFIEEGEVLVTTN-------SEDGENEVGRLKAGDYFGEVAILANIPRIA 708
           + +G+  D  + +E GEV +T          E+G  E+ R   G YFGE+A++ N PR A
Sbjct: 302 IAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYFGELALVTNKPRAA 361

Query: 709 NVYAIGVTKLAELDVKCYTRLMGPCIDRMRKHFLKYRNQLEKLF 840
           + +AIG  K   +DV+ + RL+GPC++ M+++   Y  QL  LF
Sbjct: 362 SAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNIATYEEQLVALF 405
>sp|Q26619|KAPR_STRPU cAMP-dependent protein kinase type II regulatory subunit
          Length = 369

 Score =  217 bits (552), Expect = 4e-56
 Identities = 119/290 (41%), Positives = 178/290 (61%), Gaps = 9/290 (3%)
 Frame = +1

Query: 4   FDPASVDNETFEKNRKIFPKTPKQLDKIREILQTNFLFNCLDEEQLAKVVQSMFYIDVLQ 183
           +DP + DN+T +  + ++PK+ +Q  ++ E ++   LF  LDE+Q+ +V+ +MF      
Sbjct: 87  YDPEA-DNDT-DTQKLVYPKSDEQRARLTEAVKNILLFRALDEKQMQEVIDAMFEKKTTP 144

Query: 184 GDVIIKENDPGDNFYVID---YGTFTASNQIKTIYEKYENEGSFGELALMYNCPRVASII 354
           GD +I + D GDNFYVID   Y  F   N++      Y++ GSFGELALMYN PR A+I 
Sbjct: 145 GDHVIDQGDDGDNFYVIDRGEYDIFVNDNKVGA----YKDSGSFGELALMYNTPRAATIA 200

Query: 355 ANTDGGLWAIDRITFRQLILKGAYQKRKRYQDFIKSVPILQELIDYDQCNLADALKT-II 531
           A TDG LWA+DR++FR+++LK A +KR+ Y++ ++ V I + L  Y++ NLADAL T   
Sbjct: 201 ATTDGILWALDRVSFRRIVLKNAAKKRRIYEELLEKVSIFKSLEPYERMNLADALVTRTY 260

Query: 532 VNNEKILTEGESGDRMYFIEEGEVLVTTNSE-----DGENEVGRLKAGDYFGEVAILANI 696
            + + I+ +G+  D  YFIE G+  +   SE     D E EV     G YFGE+A+L N 
Sbjct: 261 EDGDCIIAQGDGADGCYFIEAGQCRIAMKSERSDNPDEEKEVAIYNQGQYFGELALLTNK 320

Query: 697 PRIANVYAIGVTKLAELDVKCYTRLMGPCIDRMRKHFLKYRNQLEKLFTK 846
           PR A+VYA+       LDV  + RL+GPC+D M+++   Y  +  +LF K
Sbjct: 321 PRAASVYAVEDVDCL-LDVNAFERLLGPCMDIMKRNIEHYEQETSRLFGK 369
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,729,176
Number of Sequences: 369166
Number of extensions: 1830437
Number of successful extensions: 5418
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5081
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)