Planaria EST Database

DrC_01062

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01062
         (738 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters


 ***** No hits found ******


  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,812,960
Number of Sequences: 369166
Number of extensions: 341538
Number of successful extensions: 809
Number of sequences better than 10.0: 0
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6631293200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


	
Cluster detail

	

	DrC_01062
	

	
    
		
  1. Dr_sW_003_D03
    2. 
		
  2. Dr_sW_001_E19
    3. 
		
  3. Dr_sW_006_M13
    4. 
		
  4. Dr_sW_012_J18
    5. 
		
  5. Dr_sW_021_N11
    6. 
		
  6. Dr_sW_026_P11
    7. 
		
  7. Dr_sW_004_J19
    8. 
		
  8. Dr_sW_004_I20
    9. 
		
  9. Dr_sW_016_I04
    10. 
		
  10. Dr_sW_026_K22
    11. 
		
  11. Dr_sW_007_K01
    12. 
		
  12. Dr_sW_010_I22
    13. 
		
  13. Dr_sW_001_O17
    14. 
		
  14. Dr_sW_019_G20
    15. 
		
  15. Dr_sW_013_L08
    16. 
		
  16. Dr_sW_005_P22
    17. 
		
  17. Dr_sW_024_A14
    18. 
		
  18. Dr_sW_020_L21
    19. 
		
  19. Dr_sW_019_I12
    20. 
		
  20. Dr_sW_025_C04
    21. 
		
  21. Dr_sW_001_D08
    22. 
		
  22. Dr_sW_012_H24
    23. 
		
  23. Dr_sW_022_C08
    24. 
		
  24. Dr_sW_028_K23
    25. 
		
  25. Dr_sW_007_I02
    26. 
		
  26. Dr_sW_016_E07
    27.