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Planaria EST Database

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00640
         (613 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O19010|CRIS3_HORSE  Cysteine-rich secretory protein 3 pre...   124   1e-28
sp|P54108|CRIS3_HUMAN  Cysteine-rich secretory protein 3 pre...   122   9e-28
sp|P48060|GLIP1_HUMAN  Glioma pathogenesis-related protein 1...   121   1e-27
sp|Q8JGT9|CRVP_RHATT  Tigrin precursor                            118   1e-26
sp|Q8JI39|CRVP_TRIFL  Triflin precursor                           114   1e-25
sp|Q8UW11|CRVP2_LAPHA  Cysteine-rich venom protein 2 precurs...   114   1e-25
sp|Q9CWG1|GLIP1_MOUSE  Glioma pathogenesis-related protein 1...   113   3e-25
sp|Q8AVA4|CRVP_PSEAU  Pseudechetoxin precursor (PsTx)             112   1e-24
sp|Q7ZTA0|CRVP_AGKPI  Piscivorin precursor                        111   1e-24
sp|P16562|CRIS2_HUMAN  Cysteine-rich secretory protein 2 pre...   111   2e-24

>sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 precursor (CRISP-3)
          Length = 245

 Score =  124 bits (312), Expect = 1e-28
 Identities = 69/180 (38%), Positives = 102/180 (56%), Gaps = 5/180 (2%)
 Frame = +3

Query: 48  TQVQRDQILNAHNNYRKSVAKGIVKDKSTASNMLKMKWSSNSEAKAQASANKCVFKHDKS 227
           ++VQ++ I+N HN+ R++V+         ASNMLKM+W S +   AQ  ANKC+ +H K+
Sbjct: 35  SEVQKE-IVNKHNDLRRTVSP-------LASNMLKMQWDSKTATNAQNWANKCLLQHSKA 86

Query: 228 NDRVYGGFKYVGQNIALFTGTNM-TKGVEMWFNEINNYAYLTN--SCSAVCGHYTQVAWA 398
            DR  G  K  G+N+ + +  N  +  ++ W +E++++ Y     + +AV GHYTQV W 
Sbjct: 87  EDRAVGTMK-CGENLFMSSIPNSWSDAIQNWHDEVHDFKYGVGPKTPNAVVGHYTQVVWY 145

Query: 399 KSQELGCGAANCKYKTFNVVMLFCNYAPGGNYAGQF--PYENGKACATCPTNTKCEDGLC 572
            S  +GCG A C  +        C Y P GNY  +   PYE G  CA CP N  C++GLC
Sbjct: 146 SSYRVGCGIAYCPKQGTLKYYYVCQYCPAGNYVNKINTPYEQGTPCARCPGN--CDNGLC 203

>sp|P54108|CRIS3_HUMAN Cysteine-rich secretory protein 3 precursor (CRISP-3) (SGP28
           protein)
          Length = 245

 Score =  122 bits (305), Expect = 9e-28
 Identities = 68/180 (37%), Positives = 102/180 (56%), Gaps = 5/180 (2%)
 Frame = +3

Query: 48  TQVQRDQILNAHNNYRKSVAKGIVKDKSTASNMLKMKWSSNSEAKAQASANKCVFKHDKS 227
           TQVQR+ I+N HN  R++V+         A NMLKM+W+  + A AQ  AN+C ++H   
Sbjct: 36  TQVQRE-IVNKHNELRRAVSP-------PARNMLKMEWNKEAAANAQKWANQCNYRHSNP 87

Query: 228 NDRVYGGFKYVGQNIALFTGTNM-TKGVEMWFNEINNYAYLTN--SCSAVCGHYTQVAWA 398
            DR+       G+N+ + + ++  ++ ++ WF+E N++ +     + +AV GHYTQV W 
Sbjct: 88  KDRMTS--LKCGENLYMSSASSSWSQAIQSWFDEYNDFDFGVGPKTPNAVVGHYTQVVWY 145

Query: 399 KSQELGCGAANCKYKTFNVVMLFCNYAPGGNYAGQF--PYENGKACATCPTNTKCEDGLC 572
            S  +GCG A C  +        C Y P GN+A +   PYE G  CA+CP N  C+DGLC
Sbjct: 146 SSYLVGCGNAYCPNQKVLKYYYVCQYCPAGNWANRLYVPYEQGAPCASCPDN--CDDGLC 203

>sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1 precursor (GliPR 1) (RTVP-1
           protein)
          Length = 266

 Score =  121 bits (304), Expect = 1e-27
 Identities = 68/176 (38%), Positives = 93/176 (52%), Gaps = 12/176 (6%)
 Frame = +3

Query: 81  HNNYRKSVAKGIVKDKSTASNMLKMKWSSNSEAKAQASANKCVFKHD---KSNDRVYGGF 251
           HN +R  V       K TAS+ML M W       A+A A+ C F H+   K   +++  F
Sbjct: 41  HNKFRSEV-------KPTASDMLYMTWDPALAQIAKAWASNCQFSHNTRLKPPHKLHPNF 93

Query: 252 KYVGQNIALFTGT----NMTKGVEMWFNEINNYAYLTNSCSAVCGHYTQVAWAKSQELGC 419
             +G+NI  +TG+    +++  +  W++EI +Y + T  C  VCGHYTQV WA S ++GC
Sbjct: 94  TSLGENI--WTGSVPIFSVSSAITNWYDEIQDYDFKTRICKKVCGHYTQVVWADSYKVGC 151

Query: 420 GAANC-KYKTF----NVVMLFCNYAPGGNYAGQFPYENGKACATCPTNTKCEDGLC 572
               C K   F    N     CNY PGGNY   +PY+ G  C+ CP N KC D LC
Sbjct: 152 AVQFCPKVSGFDALSNGAHFICNYGPGGNYP-TWPYKRGATCSACPNNDKCLDNLC 206

>sp|Q8JGT9|CRVP_RHATT Tigrin precursor
          Length = 237

 Score =  118 bits (295), Expect = 1e-26
 Identities = 64/177 (36%), Positives = 98/177 (55%), Gaps = 5/177 (2%)
 Frame = +3

Query: 57  QRDQILNAHNNYRKSVAKGIVKDKSTASNMLKMKWSSNSEAKAQASANKCVFKHDKSNDR 236
           ++ +I+N HN++R+SV       + TA NMLKM+W S + + A+  A +C + H   + R
Sbjct: 32  KQQEIVNIHNSFRRSV-------RPTARNMLKMEWYSEAASNAERWAYQCAYDHSPRSSR 84

Query: 237 VYGGFKYVGQNIALFTGT-NMTKGVEMWFNEINNYAYLT--NSCSAVCGHYTQVAWAKSQ 407
           +  G +  G+NI + +     T  ++ W++E  N+ Y    N   +V GHYTQ+ W KS 
Sbjct: 85  ILNGIQ-CGENIFMASDPWAWTSIIQDWYDEYRNFVYGVGANPPDSVTGHYTQIVWYKSY 143

Query: 408 ELGCGAANCKYKTFNVVMLFCNYAPGGNYAG--QFPYENGKACATCPTNTKCEDGLC 572
            +GC AA C    +N   + C Y P GN  G    PY +G  CA CP+N  C++GLC
Sbjct: 144 LVGCAAAYCPSSLYNYFYV-CQYCPAGNIQGSTSTPYASGPTCADCPSN--CDNGLC 197

>sp|Q8JI39|CRVP_TRIFL Triflin precursor
          Length = 240

 Score =  114 bits (286), Expect = 1e-25
 Identities = 68/179 (37%), Positives = 95/179 (53%), Gaps = 8/179 (4%)
 Frame = +3

Query: 60  RDQILNAHNNYRKSVAKGIVKDKSTASNMLKMKWSSNSEAKAQASANKCVFKHDKSNDRV 239
           +++I++ HN+ R+SV         TASNMLKM+W   + A A+  A +C+  H   + RV
Sbjct: 34  QNEIIDLHNSLRRSV-------NPTASNMLKMEWYPEAAANAERWAYRCIESHSSRDSRV 86

Query: 240 YGGFKYVGQNIALFT-GTNMTKGVEMWFNEINNYAYLTNS--CSAVCGHYTQVAWAKSQE 410
            GG K  G+NI + T     T  +  W  E  ++ Y   +    AV GHYTQ+ W KS  
Sbjct: 87  IGGIK-CGENIYMATYPAKWTDIIHAWHGEYKDFKYGVGAVPSDAVIGHYTQIVWYKSYR 145

Query: 411 LGCGAANC---KYKTFNVVMLFCNYAPGGNYAGQ--FPYENGKACATCPTNTKCEDGLC 572
            GC AA C   KY  F V    C Y P GN  G+   PY++G  C  CP++  C++GLC
Sbjct: 146 AGCAAAYCPSSKYSYFYV----CQYCPAGNIIGKTATPYKSGPPCGDCPSD--CDNGLC 198

>sp|Q8UW11|CRVP2_LAPHA Cysteine-rich venom protein 2 precursor (CRVP)
          Length = 238

 Score =  114 bits (286), Expect = 1e-25
 Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 5/174 (2%)
 Frame = +3

Query: 66  QILNAHNNYRKSVAKGIVKDKSTASNMLKMKWSSNSEAKAQASANKCVFKHDKSNDRVYG 245
           +I++ HN  R+SV       K TA NML+MKW+S++   A+ SA++C F H   + R  G
Sbjct: 36  EIVDKHNALRRSV-------KPTARNMLQMKWNSHAAQNAKRSADRCTFAHSPEHTRTVG 88

Query: 246 GFKYVGQNIALFTGTNMTKG-VEMWFNEINNYAYLTNS--CSAVCGHYTQVAWAKSQELG 416
            F+  G+NI + +      G V+ W++EI N+ Y   +    +V GHYTQ+ W KS  LG
Sbjct: 89  KFR-CGENIFMSSQPFAWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQIVWYKSHLLG 147

Query: 417 CGAANCKYKTFNVVMLFCNYAPGGNYAGQF--PYENGKACATCPTNTKCEDGLC 572
           C +A C    +   +  C Y P GN       PY++G +C  CP  + C +GLC
Sbjct: 148 CASAKCSSTKY---LYVCQYCPAGNIRSSIATPYKSGPSCGDCP--SACVNGLC 196

>sp|Q9CWG1|GLIP1_MOUSE Glioma pathogenesis-related protein 1 precursor (GliPR 1)
          Length = 255

 Score =  113 bits (283), Expect = 3e-25
 Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
 Frame = +3

Query: 66  QILNAHNNYRKSVAKGIVKDKSTASNMLKMKWSSNSEAKAQASANKCVFKHDKS-NDRVY 242
           + +  HN  R  V+         A NML M W       A+A    C FKH+   + R++
Sbjct: 36  ECVQVHNQLRSKVSP-------PARNMLYMSWDPKLAQIAKAWTKSCEFKHNPQLHSRIH 88

Query: 243 GGFKYVGQNIALFTGT--NMTKGVEMWFNEINNYAYLTNSCSAVCGHYTQVAWAKSQELG 416
             F  +G+NI L + +  +++  +  W+ EI +Y + T  C  VCGHYTQV WA S +LG
Sbjct: 89  PNFTALGENIWLGSLSIFSVSSAISAWYEEIKHYDFSTRKCRHVCGHYTQVVWADSYKLG 148

Query: 417 CGAANCKYKTFNVVMLFCNYAPGGNYAGQFPYENGKACATCPTNTKCEDGLC 572
           C    C     N     C+Y P GNY   +PY+ G  C+ CP + KC + LC
Sbjct: 149 CAVQLCP----NGANFICDYGPAGNYP-TWPYKQGATCSDCPKDDKCLNSLC 195

>sp|Q8AVA4|CRVP_PSEAU Pseudechetoxin precursor (PsTx)
          Length = 238

 Score =  112 bits (279), Expect = 1e-24
 Identities = 65/174 (37%), Positives = 92/174 (52%), Gaps = 5/174 (2%)
 Frame = +3

Query: 66  QILNAHNNYRKSVAKGIVKDKSTASNMLKMKWSSNSEAKAQASANKCVFKHDKSNDRVYG 245
           +I++ HN  R+SV       K TA NML+MKW+S +   A+  AN+C F H   N R  G
Sbjct: 36  EIVDKHNALRRSV-------KPTARNMLQMKWNSRAAQNAKRWANRCTFAHSPPNKRTVG 88

Query: 246 GFKYVGQNIALFTGTNMTKG-VEMWFNEINNYAYLTNS--CSAVCGHYTQVAWAKSQELG 416
             +  G+NI + +      G V+ W++EI N+ Y   +    +V GHYTQV W KS  +G
Sbjct: 89  KLR-CGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSYLIG 147

Query: 417 CGAANCKYKTFNVVMLFCNYAPGGNYAGQF--PYENGKACATCPTNTKCEDGLC 572
           C +A C    +   +  C Y P GN  G    PY++G  CA CP  + C + LC
Sbjct: 148 CASAKCSSSKY---LYVCQYCPAGNIRGSIATPYKSGPPCADCP--SACVNKLC 196

>sp|Q7ZTA0|CRVP_AGKPI Piscivorin precursor
          Length = 240

 Score =  111 bits (278), Expect = 1e-24
 Identities = 65/176 (36%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
 Frame = +3

Query: 60  RDQILNAHNNYRKSVAKGIVKDKSTASNMLKMKWSSNSEAKAQASANKCVFKHDKSNDRV 239
           ++QI++ HN+ R+SV         TASNMLKM+W   + A A+  A +C+  H   N RV
Sbjct: 34  QNQIVDLHNSLRRSV-------NPTASNMLKMEWYPEAAANAERWAYRCIESHSPRNSRV 86

Query: 240 YGGFKYVGQNIALFT-GTNMTKGVEMWFNEINNYAY--LTNSCSAVCGHYTQVAWAKSQE 410
            GG K  G+NI + +     T+ +  W  E  N+ Y    +  +AV GH+TQ+ W KS  
Sbjct: 87  LGGIK-CGENIYMSSIPIKWTEIIHAWHGENKNFKYGIGADPPNAVIGHFTQIVWYKSYL 145

Query: 411 LGCGAANCKYKTFNVVMLFCNYAPGGNYAGQF--PYENGKACATCPTNTKCEDGLC 572
           +GC AA C    ++   + C Y P GN  G+   PY++G  C  CP  + C +GLC
Sbjct: 146 VGCAAAYCPSSEYSYFYV-CQYCPAGNIIGKIATPYKSGPPCGDCP--SACVNGLC 198

>sp|P16562|CRIS2_HUMAN Cysteine-rich secretory protein 2 precursor (CRISP-2)
           (Testis-specific protein TPX-1)
          Length = 243

 Score =  111 bits (277), Expect = 2e-24
 Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
 Frame = +3

Query: 51  QVQRDQILNAHNNYRKSVAKGIVKDKSTASNMLKMKWSSNSEAKAQASANKCVFKHDKSN 230
           QVQR+ I+N HN  RK+V+         ASNMLKM+WS      AQ  ANKC  +H    
Sbjct: 35  QVQRE-IVNKHNELRKAVSP-------PASNMLKMEWSREVTTNAQRWANKCTLQHSDPE 86

Query: 231 DRVYGGFKYVGQNIALFTG-TNMTKGVEMWFNEINNYAYLTN--SCSAVCGHYTQVAWAK 401
           DR        G+N+ + +  T+ +  ++ W++EI ++ Y     S +AV GHYTQ+ W  
Sbjct: 87  DRKTS--TRCGENLYMSSDPTSWSSAIQSWYDEILDFVYGVGPKSPNAVVGHYTQLVWYS 144

Query: 402 SQELGCGAANCKYKTFNVVMLFCNYAPGGNYAGQ--FPYENGKACATCPTNTKCEDGLC 572
           + ++GCG A C  +        C Y P GN   +   PY+ G  CA CP +  C+ GLC
Sbjct: 145 TYQVGCGIAYCPNQDSLKYYYVCQYCPAGNNMNRKNTPYQQGTPCAGCPDD--CDKGLC 201

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,142,849
Number of Sequences: 369166
Number of extensions: 1411077
Number of successful extensions: 3501
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3351
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4797864890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

1. Dr_sW_016_O19
2. Dr_sW_020_O14
3. Dr_sW_015_B22