DrC_00288
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00288 (866 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P36044|MNN4_YEAST Protein MNN4 76 1e-13 sp|P19246|NFH_MOUSE Neurofilament triplet H protein (200 kD... 73 9e-13 sp|P12036|NFH_HUMAN Neurofilament triplet H protein (200 kD... 72 2e-12 sp|Q9U7E0|ATRX_CAEEL Transcriptional regulator ATRX homolog... 71 3e-12 sp|P13816|GARP_PLAFF Glutamic acid-rich protein precursor 71 4e-12 sp|P12839|NFM_RAT Neurofilament triplet M protein (160 kDa ... 69 1e-11 sp|P35663|CYLC1_HUMAN Cylicin-1 (Cylicin I) (Multiple-band ... 68 3e-11 sp|Q8WXA9|SFR12_HUMAN Splicing factor, arginine/serine-rich... 68 4e-11 sp|Q92794|MYST3_HUMAN Histone acetyltransferase MYST3 (MYST... 67 8e-11 sp|P53352|INCE_CHICK Inner centromere protein 65 3e-10
>sp|P36044|MNN4_YEAST Protein MNN4 Length = 1178 Score = 76.3 bits (186), Expect = 1e-13 Identities = 41/145 (28%), Positives = 85/145 (58%), Gaps = 3/145 (2%) Frame = +1 Query: 52 DEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNETSKESKK 231 +E K ++ + EEK K E+ K+E+ + K +E K +E+E K E K+ ++ Sbjct: 1035 EERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQE 1094 Query: 232 DEDQPKNEAPNESKEDDAH-LKNETLKESKEDEDQH--KNEAPKESKGDETHLKHETPIE 402 +E++ K E + K+++ +KNE +E+K++ED+ KNE ++ K +E + K+E + Sbjct: 1095 EEEKKKKEEEEKKKQEEGEKMKNED-EENKKNEDEEKKKNEEEEKKKQEEKNKKNEDEEK 1153 Query: 403 PKEDKDQHATDAQKDLKKEDEAQSN 477 K+++++ + +++ KK++E SN Sbjct: 1154 KKQEEEEKKKNEEEEKKKQEEGHSN 1178
Score = 71.6 bits (174), Expect = 3e-12
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Frame = +1
Query: 22 KQKYDVKSKNDEHKELNAEEGKN----EEKTDKLTEDVTKEEQVNESTKNKEIPKDSKED 189
+++ + K K +E K+ EE K EEK K E+ K+E+ + K +E K +E+
Sbjct: 1037 RKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEE 1096
Query: 190 EASLKNETSKESKKDEDQPKNE-APNESKEDDAHLKNETLKESKEDEDQHKNEAPKESKG 366
E K E K+ +++ ++ KNE N+ ED+ KNE ++ K++E KNE ++ K
Sbjct: 1097 EKKKKEEEEKKKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNEDEEKKKQ 1156
Query: 367 DETHLKHETPIEPKEDKDQHA 429
+E K E K+ ++ H+
Sbjct: 1157 EEEEKKKNEEEEKKKQEEGHS 1177
Score = 67.0 bits (162), Expect = 6e-11
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = +1
Query: 127 KEEQVNESTKNKEIPKDSKEDEASLKNETSKESKKDEDQPKNEAPNESK---EDDAHLKN 297
+E + E K +E K KE+E K E ++ KK+E++ K + E K E++ +
Sbjct: 1035 EERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQE 1094
Query: 298 ETLKESKEDEDQHKNEAPKESKG-DETHLKHETPIEPKEDKDQHATDAQKDLKKEDEAQS 474
E K+ KE+E++ K E ++ K DE + K+E + K ++++ +K+ K EDE +
Sbjct: 1095 EEEKKKKEEEEKKKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNEDEEKK 1154
Query: 475 NNETSKDCKDKSIEK 519
E + K++ EK
Sbjct: 1155 KQEEEEKKKNEEEEK 1169
Score = 52.4 bits (124), Expect = 2e-06
Identities = 47/198 (23%), Positives = 82/198 (41%)
Frame = +1
Query: 235 EDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPKESKGDETHLKHETPIEPKED 414
ED + E K + K E K+ KE+E++ K E ++ K +E K KE+
Sbjct: 1026 EDYAYAKLLEERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKK------KEE 1079
Query: 415 KDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQPEVDKSXXXXXXXXXXXX 594
+++ + ++ K+E+E + E + K + EK+ N+ E +K
Sbjct: 1080 EEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEEGEKMK---NEDEENK------------- 1123
Query: 595 XDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEKEKPEEMKATTVEHVEHCPDSESAL 774
K+EDE K ++E+ KN D+ +K++ EE K
Sbjct: 1124 -----KNEDEEKKKNEEEEKKKQEEKNKKNEDEEKKKQEEEEK----------------- 1161
Query: 775 NKEIDNEHETKHNEAHSN 828
K+ + E + K E HSN
Sbjct: 1162 -KKNEEEEKKKQEEGHSN 1178
Score = 41.6 bits (96), Expect = 0.003
Identities = 42/195 (21%), Positives = 79/195 (40%)
Frame = +1
Query: 274 EDDAHLKNETLKESKEDEDQHKNEAPKESKGDETHLKHETPIEPKEDKDQHATDAQKDLK 453
ED A+ K L+E K E + K E K+ K +E K KE++++ + ++ K
Sbjct: 1026 EDYAYAK--LLEERKRREKKKKEEEEKKKKEEEEKKK-------KEEEEKKKKEEEEKKK 1076
Query: 454 KEDEAQSNNETSKDCKDKSIEKVPENVNQPEVDKSXXXXXXXXXXXXXDNELKSEDENIS 633
KE+E + E + K + EK K E+E
Sbjct: 1077 KEEEEKKKKEEEEKKKQEEEEKK-----------------------------KKEEEEKK 1107
Query: 634 KEHSIVPDVKQEEPVKNVDQVEKEKPEEMKATTVEHVEHCPDSESALNKEIDNEHETKHN 813
K+ ++ E +KN D+ K+ +E K E + + ++ N++ + + + +
Sbjct: 1108 KQ-------EEGEKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNED-EEKKKQEEE 1159
Query: 814 EAHSNEHNDKTETKE 858
E NE +K + +E
Sbjct: 1160 EKKKNEEEEKKKQEE 1174
>sp|P19246|NFH_MOUSE Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H) Length = 1087 Score = 73.2 bits (178), Expect = 9e-13 Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 7/240 (2%) Frame = +1 Query: 40 KSKNDEHKELNAEEG---KNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNE 210 K+K+ E +E E K EE + E+V +E + + K +P E + S K+E Sbjct: 861 KAKSPEKEEAKTSEKVAPKKEEVKSPVKEEVKAKEPPKKVEEEKTLPTPKTEAKESKKDE 920 Query: 211 TSKESKKDEDQPKNEAPNES-KEDDAHLKNETLKESKEDEDQHKNEAPKESKGDETHLKH 387 KE+ K + + K E P E K+ A K E E K+ + K +E K Sbjct: 921 APKEAPKPKVEEKKETPTEKPKDSTAEAKKEEAGEKKKAVASEEETPAKLGVKEEAKPKE 980 Query: 388 ETPIEPKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQPEVDKSXXX 567 +T E +D A + K + E + + + KD EK E+ E K Sbjct: 981 KTETTKTEAEDTKAKEPSKPTETEKPKKEEMPAAPEKKDTKEEKTTESRKPEEKPK---- 1036 Query: 568 XXXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEKEKPE---EMKATTVE 738 + ++K +D+++SKE S P ++ E + DQ E + PE E KAT E Sbjct: 1037 ---------MEAKVKEDDKSLSKEPS-KPKTEKAEKSSSTDQKESQPPEKTTEDKATKGE 1086
Score = 60.5 bits (145), Expect = 6e-09
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 10/274 (3%)
Frame = +1
Query: 40 KSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNETSK 219
K+K + K A+ EE T + D+ EQV K K + +E + S K K
Sbjct: 823 KAKPLDVKSPEAQTPVQEEAT--VPTDIRPPEQVKSPAKEKAKSPEKEEAKTSEKVAPKK 880
Query: 220 ESKKD---EDQPKNEAPNESKEDDAHLKNETLKESK-EDEDQHKNEAPKESKGDETHLKH 387
E K E+ E P + +E+ +TL K E ++ K+EAPKE+ + K
Sbjct: 881 EEVKSPVKEEVKAKEPPKKVEEE------KTLPTPKTEAKESKKDEAPKEAPKPKVEEKK 934
Query: 388 ETPIEPKED-----KDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQPEVD 552
ETP E +D K + A + +K + E+E + ++ K K EK + E
Sbjct: 935 ETPTEKPKDSTAEAKKEEAGEKKKAVASEEETPAKLGVKEEAKPK--EKTETTKTEAEDT 992
Query: 553 KSXXXXXXXXXXXXXDNELKSEDE-NISKEHSIVPDVKQEEPVKNVDQVEKEKPEEMKAT 729
K+ E+ + E +KE K EE K +V+++ K
Sbjct: 993 KAKEPSKPTETEKPKKEEMPAAPEKKDTKEEKTTESRKPEEKPKMEAKVKEDDKSLSKEP 1052
Query: 730 TVEHVEHCPDSESALNKEIDNEHETKHNEAHSNE 831
+ E S S KE +T ++A E
Sbjct: 1053 SKPKTEKAEKSSSTDQKESQPPEKTTEDKATKGE 1086
>sp|P12036|NFH_HUMAN Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H) Length = 1026 Score = 72.4 bits (176), Expect = 2e-12 Identities = 69/239 (28%), Positives = 105/239 (43%), Gaps = 9/239 (3%) Frame = +1 Query: 28 KYDVKSKNDEHKELNAEEGKNEEKTDKLTEDV---TKEEQVNESTKNKEIPKDSKEDEAS 198 K +VKS L E+ K EK E+V KEE+ + K KE PK ++E++A Sbjct: 796 KEEVKSPEKAKSPLK-EDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAP 854 Query: 199 L--KNETSKESKKDEDQPKNEAPN----ESKEDDAHLKNETLKESKEDEDQHKNEAPKES 360 K E K+SKK+E PK EAP E KE E+ E+K++E + K + P Sbjct: 855 ATPKTEEKKDSKKEE-APKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPE 913 Query: 361 KGDETHLKHETPIEPKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQ 540 K E P + + +D + + KKE + E SK + K E PE Sbjct: 914 K--------EAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKK--EAAPE---- 959 Query: 541 PEVDKSXXXXXXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEKEKPEE 717 + D + + K +D+ +SKE S P ++ E + DQ + + PE+ Sbjct: 960 -KKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPS-KPKAEKAEKSSSTDQKDSKPPEK 1016
Score = 58.9 bits (141), Expect = 2e-08
Identities = 61/289 (21%), Positives = 118/289 (40%), Gaps = 15/289 (5%)
Frame = +1
Query: 37 VKSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNETS 216
+K K++E ++ + K ++ TE+ E+V E + + ++ KE+E + E
Sbjct: 436 IKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAE 495
Query: 217 KESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEA--PKESKGDETHLKHE 390
++ + P EA + KE + +K E K E + K EA P E K E K +
Sbjct: 496 GGEEETKSPPAEEAASPEKEAKSPVKEEA-KSPAEAKSPEKEEAKSPAEVKSPE---KAK 551
Query: 391 TPIE-----PKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQP---E 546
+P + P E K +A+ + + ++ + ++ K + K PE P E
Sbjct: 552 SPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEE 611
Query: 547 VDKSXXXXXXXXXXXXXDNELKSED--ENISKEHSIVPD-VKQEEPVKNVDQVEKEKPEE 717
E+KS + ++ +KE + P+ K E K+ ++ E + PE+
Sbjct: 612 AKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEK 671
Query: 718 MKATTVEHVEHCPDSESALNKEIDNEHETKH--NEAHSNEHNDKTETKE 858
K+ + ++S + E + + K E + K+ KE
Sbjct: 672 AKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKE 720
Score = 58.5 bits (140), Expect = 2e-08
Identities = 64/276 (23%), Positives = 109/276 (39%), Gaps = 15/276 (5%)
Frame = +1
Query: 76 EEGKNEEKTDK-LTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNET----------SKE 222
EE K EK + E+ E+ K K + S E + K E +K
Sbjct: 734 EEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKS 793
Query: 223 SKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPKESKGDETHLKHETPIE 402
K+E + +A + KED + E K+ + + E P+E K E K E
Sbjct: 794 PVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKA 853
Query: 403 PKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQPEVDKSXXXXXXXX 582
P K + D++K+ + EA K K+ ++EK E+ + + +++
Sbjct: 854 PATPKTEEKKDSKKEEAPKKEAPKPKVEEK--KEPAVEKPKESKVEAKKEEA-------- 903
Query: 583 XXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEKEKPEEMKA----TTVEHVEH 750
E K + KE +VK++ K +V K++P++ KA E E
Sbjct: 904 -------EDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEA 956
Query: 751 CPDSESALNKEIDNEHETKHNEAHSNEHNDKTETKE 858
P+ + ++ E EA + E +DKT +KE
Sbjct: 957 APEKKDTKEEKAKKPEEKPKTEAKAKE-DDKTLSKE 991
Score = 57.0 bits (136), Expect = 7e-08
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 19/299 (6%)
Frame = +1
Query: 25 QKYDVKSKNDEHKELNAEEGKNEEKT---DKLTEDVTKEEQVNESTKNKEIPKDSKEDEA 195
++ + ++K +E KE EEG EE+ ++ T+ EE + + K K+ + A
Sbjct: 472 EEEEKEAKEEEGKE---EEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPA 528
Query: 196 SLKNETSKESK-----KDEDQPKNEAPNESKEDDAHLKNETLKESK-----EDEDQHKNE 345
K+ +E+K K ++ K+ A E+K K+ +E+K + ++ K+
Sbjct: 529 EAKSPEKEEAKSPAEVKSPEKAKSPAKEEAK-SPPEAKSPEKEEAKSPAEVKSPEKAKSP 587
Query: 346 APKESKGDETHLKHETPIEPKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIE--K 519
A +E+K E P +++ + +A+ +K+E ++ + ++ + K + E K
Sbjct: 588 AKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAK 647
Query: 520 VPENVNQPEVDKSXXXXXXXXXXXXXDNELKSEDENISKEHS-IVPDVKQEEPVKNVDQV 696
PE PE KS + +K+E ++ K S + + K E K+ +
Sbjct: 648 SPEKAKSPEKAKS-PEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKE 706
Query: 697 EKEKPEEMKATTVEHVEHCPDSESALNKEIDNEHETK---HNEAHSNEHNDKTETKETI 864
E + PE+ K+ E + ++S + +E + K EA S E E +T+
Sbjct: 707 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTL 765
Score = 50.8 bits (120), Expect = 5e-06
Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Frame = +1
Query: 40 KSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNETSK 219
K K +E KE E+ K E K + E+ +++V T KE P + E + E ++
Sbjct: 877 KPKVEEKKEPAVEKPK-ESKVEAKKEEAEDKKKV--PTPEKEAPAKVEVKEDAKPKEKTE 933
Query: 220 ESKKDEDQPKNEAPNE--SKEDDAHLKNETLKESKEDEDQHKNEAPKESKGDETHLKHET 393
+KK+ D K + P++ K++ A K +T KE K + + K + ++K D+ L E
Sbjct: 934 VAKKEPDDAKAKEPSKPAEKKEAAPEKKDT-KEEKAKKPEEKPKTEAKAKEDDKTLSKE- 991
Query: 394 PIEPKEDK-DQHATDAQKDLKKEDEA 468
P +PK +K ++ ++ QKD K ++A
Sbjct: 992 PSKPKAEKAEKSSSTDQKDSKPPEKA 1017
Score = 46.2 bits (108), Expect = 1e-04
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Frame = +1
Query: 22 KQKYDVKSKNDEHKELNAEEGKNEEKTD---KLTEDVTKEEQVNESTKNKEIP--KDSKE 186
K+K K K E+ K +EKT+ K +D +E + K + P KD+KE
Sbjct: 906 KKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKE 965
Query: 187 DEASLKNETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPKESKG 366
++A KK E++PK EA ++KEDD L E K E ++ + K+SK
Sbjct: 966 EKA----------KKPEEKPKTEA--KAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKP 1013
Query: 367 DE 372
E
Sbjct: 1014 PE 1015
Score = 37.0 bits (84), Expect = 0.071
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +1
Query: 22 KQKYDVKSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASL 201
K+K +V K + + E+K + TKEE+ + + + +KED+ +L
Sbjct: 929 KEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTL 988
Query: 202 KNETSK------ESKKDEDQPKNEAPNESKEDDA 285
E SK E DQ ++ P ++ ED A
Sbjct: 989 SKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKA 1022
Score = 35.8 bits (81), Expect = 0.16
Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 1/192 (0%)
Frame = +1
Query: 286 HLKNETLKESKEDEDQHKNEAPKESKGDETHLKHE-TPIEPKEDKDQHATDAQKDLKKED 462
H+K ++ ++ K E K E + +ET + E T E KE K++ + + +E+
Sbjct: 435 HIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGG--EEE 492
Query: 463 EAQSNNETSKDCKDKSIEKVPENVNQPEVDKSXXXXXXXXXXXXXDNELKSEDENISKEH 642
EA+ E +K + + P +++ E KS ++ +K
Sbjct: 493 EAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPA-----------EAKSPEKEEAKSP 541
Query: 643 SIVPDVKQEEPVKNVDQVEKEKPEEMKATTVEHVEHCPDSESALNKEIDNEHETKHNEAH 822
+ +VK E K+ + E + P E K+ E + + +S + + E K
Sbjct: 542 A---EVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEA 598
Query: 823 SNEHNDKTETKE 858
+ K+ KE
Sbjct: 599 KSPEKAKSPVKE 610
>sp|Q9U7E0|ATRX_CAEEL Transcriptional regulator ATRX homolog (X-linked nuclear protein 1) Length = 1359 Score = 71.2 bits (173), Expect = 3e-12 Identities = 64/293 (21%), Positives = 131/293 (44%), Gaps = 13/293 (4%) Frame = +1 Query: 22 KQKYDVKSKNDEHKELNAEEGKNEEKTDKLTE---DVTKEEQVNESTKNKEIPKDSKEDE 192 K+K ++D+ +E + + + + +E D + EE+ + +K+K+ K+++ Sbjct: 58 KRKASSSEEDDDDEEESPRKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEK 117 Query: 193 ASLKNETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKED-EDQHKNEAPKESKGD 369 + K TS +D D+ E +SK+ K +T ES E+ E++ K + K++K Sbjct: 118 SKKKRTTSSSEDEDSDE---EREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEK 174 Query: 370 ETHLKHETPIEPKEDKDQHATDAQKDLKKEDEAQSNNET--------SKDCKDKSIEKVP 525 + ET E ED ++ + ++K LKK+ +++S +E+ SK K ++K Sbjct: 175 SVKKRAETSEESDED-EKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKES 233 Query: 526 ENVNQ-PEVDKSXXXXXXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEK 702 E+ ++ PE K+ KS++E KE S P K+ VK + E+ Sbjct: 234 ESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEE 293 Query: 703 EKPEEMKATTVEHVEHCPDSESALNKEIDNEHETKHNEAHSNEHNDKTETKET 861 + +++ + S E D + E++ ++ K + +E+ Sbjct: 294 SEESDVEVLPQKKKRGAVTLISDSEDEKDQKSESEASDVEEKVSKKKAKKQES 346
Score = 70.5 bits (171), Expect = 6e-12
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 6/285 (2%)
Frame = +1
Query: 22 KQKYDVKSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASL 201
K+K S DE + E+ +K K T+ T E ES + +++ K K E S+
Sbjct: 119 KKKRTTSSSEDEDSDEEREQ--KSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSV 176
Query: 202 KN--ETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPKESKGDET 375
K ETS+ES +DE SK+ LK + ES E E + + E K K
Sbjct: 177 KKRAETSEESDEDE--------KPSKKSKKGLKKKAKSES-ESESEDEKEVKKSKK---- 223
Query: 376 HLKHETPIEPKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQPEVDK 555
K + ++ + + + A + +K K++ S+ E+S+ K E+ E+ +P+ K
Sbjct: 224 --KSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKK 281
Query: 556 SXXXXXXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEKEKPEEMKATTV 735
+L S++E+ + ++P K+ V + E EK ++ ++
Sbjct: 282 PLAV-----------KKLSSDEESEESDVEVLPQKKKRGAVTLISDSEDEKDQKSES--- 327
Query: 736 EHVEHCPDSESALNKEIDNEHETKHNEAHSNEH----NDKTETKE 858
D E ++K+ + E+ + + S+E N K++ KE
Sbjct: 328 ----EASDVEEKVSKKKAKKQESSESGSDSSEGSITVNRKSKKKE 368
Score = 60.8 bits (146), Expect = 5e-09
Identities = 58/262 (22%), Positives = 109/262 (41%), Gaps = 14/262 (5%)
Frame = +1
Query: 115 EDVTKEEQVNESTKNKEIPK--DSKEDEAS-------LKNETSKESKKDEDQPKNEAPNE 267
ED+ Q+ K K K + +E E K + S++D+D +
Sbjct: 19 EDLEMARQIENERKEKRAQKLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKS 78
Query: 268 SKEDDAHLKNETLK-ESKEDEDQHKNEAPK---ESKGDETHLKHETPIEPKEDKDQHATD 435
SK+ K+E+ ES E+ED+ K+++ K + K +++ K T ED D+
Sbjct: 79 SKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQ 138
Query: 436 AQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQPEVDKSXXXXXXXXXXXXXDNELKS 615
K K+ + Q+++E+S++ +++ K + + V K +E
Sbjct: 139 KSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAET-----------SEESD 187
Query: 616 EDENISKEHSIVPDVKQEEPVKNVDQVEKE-KPEEMKATTVEHVEHCPDSESALNKEIDN 792
EDE SK+ K + ++ + EKE K + K+ V E + E+ K+ +
Sbjct: 188 EDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEK 247
Query: 793 EHETKHNEAHSNEHNDKTETKE 858
+K + S+E E +E
Sbjct: 248 RKRSKTSSEESSESEKSDEEEE 269
Score = 56.6 bits (135), Expect = 9e-08
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 2/258 (0%)
Frame = +1
Query: 40 KSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNETSK 219
K K+ + + +EE +EK K ++ K++ +ES E K+ K+ + K K
Sbjct: 172 KEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKK 231
Query: 220 ESKKDEDQPKNEAPNESKEDDAHLKNETLKE-SKEDEDQHKNEAPKESKGDETHLKHETP 396
ES+ +++ P+ + + K + + E S E+E++ K +PK K +K +
Sbjct: 232 ESESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEE-KESSPKPKKKKPLAVKKLSS 290
Query: 397 IEPKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKS-IEKVPENVNQPEVDKSXXXXX 573
E E+ D QK + S++E KD K +S V E V++ + K
Sbjct: 291 DEESEESDVEVL-PQKKKRGAVTLISDSEDEKDQKSESEASDVEEKVSKKKAKK------ 343
Query: 574 XXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEKEKPEEMKATTVEHVEHC 753
+ SE + S E SI + K + +KEKPE+ K +
Sbjct: 344 ----------QESSESGSDSSEGSITVNRKSK---------KKEKPEKKKKGII------ 378
Query: 754 PDSESALNKEIDNEHETK 807
DS + ID E K
Sbjct: 379 MDSSKLQKETIDAERAEK 396
>sp|P13816|GARP_PLAFF Glutamic acid-rich protein precursor Length = 678 Score = 70.9 bits (172), Expect = 4e-12 Identities = 62/289 (21%), Positives = 119/289 (41%), Gaps = 8/289 (2%) Frame = +1 Query: 22 KQKYDVKSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKD--SKEDEA 195 ++K + K K E KE K +EK K E ++++ E K K+I K+ KE++ Sbjct: 275 QEKIEKKKKKQEEKEK-----KKQEKERKKQEKKERKQKEKEMKKQKKIEKERKKKEEKE 329 Query: 196 SLKNETSKESKKDEDQPKNEAPNESKEDDAHLKN---ETLKESKEDEDQHKNEAPKESKG 366 K + KE+++ QP + + E L + + + E +HK E KE + Sbjct: 330 KKKKKHDKENEETMQQPDQTSEETNNEIMVPLPSPLTDVTTPEEHKEGEHKEEEHKEGEH 389 Query: 367 DETHLKHETPIEPKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEK-VPENVNQP 543 E K E E + K++H + K K+D+ + + K K + ++K V +NV + Sbjct: 390 KEGEHKEEEHKEEEHKKEEHKSKEHKSKGKKDKGKKDKGKHKKAKKEKVKKHVVKNVIED 449 Query: 544 EVDKSXXXXXXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEKE--KPEE 717 E + + E +S+ + D ++ + + +VE++ +E Sbjct: 450 EDKDGVEIINLEDKEACEEQHITVESRPLSQPQCKLIDEPEQLTLMDKSKVEEKNLSIQE 509 Query: 718 MKATTVEHVEHCPDSESALNKEIDNEHETKHNEAHSNEHNDKTETKETI 864 T+ V P ++ K E + H ++ DK E + + Sbjct: 510 QLIGTIGRVNVVPRRDNHKKKMAKIEEAELQKQKHVDKEEDKKEESKEV 558
Score = 68.2 bits (165), Expect = 3e-11
Identities = 44/172 (25%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Frame = +1
Query: 28 KYDVKSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKN-KEIPKDSKEDEASLK 204
+ +V + D HK+ A K EE + + V KEE E +K +E K+ +EDE ++
Sbjct: 517 RVNVVPRRDNHKKKMA---KIEEAELQKQKHVDKEEDKKEESKEVQEESKEVQEDEEEVE 573
Query: 205 NETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPKESKGDETHLK 384
+ +E +++E++ + E E +E++ +E +EDED+ + +E + D
Sbjct: 574 EDEEEEEEEEEEEEEEEEEEEEEEEEE-------EEEEEDEDEEDEDDAEEDEDDA---- 622
Query: 385 HETPIEPKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQ 540
E + +ED D+ D + D + EDE + + E ++ +++S +K+ N+ +
Sbjct: 623 EEDEDDAEEDDDEEDDDEEDDDEDEDEDEEDEEEEEEEEEESEKKIKRNLRK 674
Score = 67.0 bits (162), Expect = 6e-11
Identities = 72/312 (23%), Positives = 129/312 (41%), Gaps = 37/312 (11%)
Frame = +1
Query: 40 KSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNETSK 219
K+K+D K +E EEK +K T + + + N EI S D ++ N K
Sbjct: 57 KNKDDNSK---SETLLKEEKDEKDDVPTTSNDNLKNAHNNNEI--SSSTDPTNIINVNDK 111
Query: 220 ESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPKESKGDETHLKHETPI 399
+++ D+ K+ K++ H K++ K+ K+D+ + K++ K+ K ++ H K +
Sbjct: 112 DNENSVDKKKD------KKEKKHKKDKKEKKEKKDKKEKKDKKEKKHKKEKKHKKDKKKK 165
Query: 400 EPKE---------DKDQHATD-AQKDLKKEDEAQSNN----------------------- 480
E E K ++AT+ +++L +E ++ NN
Sbjct: 166 ENSEVMSLYKTGQHKPKNATEHGEENLDEEMVSEINNNAQGGLLLSSPYQYREQGGCGII 225
Query: 481 ----ETSKDCKDKSIEKVPENVNQPEVDKSXXXXXXXXXXXXXDNELKSEDENISKEHSI 648
ETS D KD E + E+ + + + E+K E E I K+
Sbjct: 226 SSVHETSNDTKDNDKENISEDKKEDHQQEEMLKTLDKKERKQKEKEMK-EQEKIEKKKK- 283
Query: 649 VPDVKQEEPVKNVDQVEKEKPEEMKATTVEHVEHCPDSESALNKEIDNEHETKHNEAHSN 828
KQEE K + E++K E+ + E E K+I+ E + K +
Sbjct: 284 ----KQEEKEKKKQEKERKKQEKKERKQKE-------KEMKKQKKIEKERKKKEEKEKKK 332
Query: 829 EHNDKTETKETI 864
+ +DK E +ET+
Sbjct: 333 KKHDK-ENEETM 343
Score = 64.7 bits (156), Expect = 3e-10
Identities = 74/328 (22%), Positives = 137/328 (41%), Gaps = 49/328 (14%)
Frame = +1
Query: 22 KQKYDVKSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASL 201
+++ + K + E K+ +E K +EK K + + KE + E K K+ K KE+E ++
Sbjct: 285 QEEKEKKKQEKERKKQEKKERKQKEKEMKKQKKIEKERKKKEE-KEKKKKKHDKENEETM 343
Query: 202 K--NETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHK-NEAPKESKGDE 372
+ ++TS+E+ + P + + H + E KE + E +HK E +E +E
Sbjct: 344 QQPDQTSEETNNEIMVPLPSPLTDVTTPEEHKEGEH-KEEEHKEGEHKEGEHKEEEHKEE 402
Query: 373 THLKHETPIEP----------KEDKDQHATDAQKDLKK-------EDEAQS-----NNET 486
H K E + K+DK +H ++ +KK EDE + N E
Sbjct: 403 EHKKEEHKSKEHKSKGKKDKGKKDKGKHKKAKKEKVKKHVVKNVIEDEDKDGVEIINLED 462
Query: 487 SKDCKDKSIEKVPENVNQPE---VDKSXXXXXXXXXXXXXDNELKSEDENISKEHSIVPD 657
+ C+++ I ++QP+ +D+ ++ K E++N+S + ++
Sbjct: 463 KEACEEQHITVESRPLSQPQCKLIDEPEQLTLM--------DKSKVEEKNLSIQEQLIGT 514
Query: 658 VKQEEPV---------------------KNVDQVEKEKPEEMKATTVEHVEHCPDSESAL 774
+ + V K+VD+ E++K EE K E E D E
Sbjct: 515 IGRVNVVPRRDNHKKKMAKIEEAELQKQKHVDK-EEDKKEESKEVQEESKEVQEDEEEVE 573
Query: 775 NKEIDNEHETKHNEAHSNEHNDKTETKE 858
E + E E + E E ++ E +E
Sbjct: 574 EDEEEEEEEEEEEEEEEEEEEEEEEEEE 601
Score = 60.5 bits (145), Expect = 6e-09
Identities = 71/304 (23%), Positives = 138/304 (45%), Gaps = 31/304 (10%)
Frame = +1
Query: 46 KNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNETSKES 225
K +EHKE +EG+++E+ K E+ KEE ++ K+K K+D+ K ++
Sbjct: 380 KEEEHKEGEHKEGEHKEEEHK-EEEHKKEEHKSKEHKSKGKKDKGKKDKGKHKKAKKEKV 438
Query: 226 KK--------DEDQPKNEAPN-ESKE--DDAHLKNETLKESKED----EDQHKNEAPKES 360
KK DED+ E N E KE ++ H+ E+ S+ ++ + +S
Sbjct: 439 KKHVVKNVIEDEDKDGVEIINLEDKEACEEQHITVESRPLSQPQCKLIDEPEQLTLMDKS 498
Query: 361 KGDETHLKHETP---------IEPKED--KDQHATDAQKDLKKE---DEAQSNNETSKDC 498
K +E +L + + P+ D K + A + +L+K+ D+ + E SK+
Sbjct: 499 KVEEKNLSIQEQLIGTIGRVNVVPRRDNHKKKMAKIEEAELQKQKHVDKEEDKKEESKEV 558
Query: 499 KDKSIEKVPENVNQPEVDKSXXXXXXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPV 678
+++S E V E+ + E D+ + E + E+E +E + ++EE
Sbjct: 559 QEESKE-VQEDEEEVEEDEE-------------EEEEEEEEEEEEEEEEEEEEEEEEEEE 604
Query: 679 KNVDQVEKEKPEEMKATTVEHVEHCP--DSESALNKEIDNEHETKHNEAHSNEHNDKTET 852
++ D+ +++ EE + E + D E ++E D+E E + E E ++ E+
Sbjct: 605 EDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEEDDDEEDDDEDEDEDEEDEEEEEEEEEES 664
Query: 853 KETI 864
++ I
Sbjct: 665 EKKI 668
Score = 57.0 bits (136), Expect = 7e-08
Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Frame = +1
Query: 22 KQKYDVKS--KNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEA 195
KQK+ K K +E KE+ E + +E +++ ED +EE+ E + +E ++ +E+E
Sbjct: 541 KQKHVDKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEE--EEEEEEEE 598
Query: 196 SLKNETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPKESKGDET 375
+ E E ++DED E EDDA + +E ++ED + + ++ DE
Sbjct: 599 EEEEEEEDEDEEDEDDA------EEDEDDAEEDEDDAEEDDDEEDDDEEDDDEDEDEDE- 651
Query: 376 HLKHETPIEPKEDKDQHATDAQKDLKK 456
E +E++++ +++K +K+
Sbjct: 652 --------EDEEEEEEEEEESEKKIKR 670
Score = 55.1 bits (131), Expect = 3e-07
Identities = 31/128 (24%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Frame = +1
Query: 25 QKYDVKSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLK 204
+K + K +E KE+ +E + EE ++ E+ +EE+ E + +E ++ +E++ +
Sbjct: 551 KKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEE 610
Query: 205 NETSKESKKD---EDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPKESKGDET 375
+E E +D ED+ E ++ ++DD +E E +EDE++ + E + K +
Sbjct: 611 DEDDAEEDEDDAEEDEDDAEEDDDEEDDDEEDDDEDEDEDEEDEEEEEEEEEESEKKIKR 670
Query: 376 HLKHETPI 399
+L+ I
Sbjct: 671 NLRKNAKI 678
>sp|P12839|NFM_RAT Neurofilament triplet M protein (160 kDa neurofilament protein) (Neurofilament medium polypeptide) (NF-M) Length = 846 Score = 69.3 bits (168), Expect = 1e-11 Identities = 64/282 (22%), Positives = 112/282 (39%), Gaps = 4/282 (1%) Frame = +1 Query: 25 QKYDVKS----KNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDE 192 +K VKS + +E ++ EEG+ EE+ + ++ K +Q E KE + E E Sbjct: 501 EKSPVKSPEAKEEEEGEKEEEEEGQEEEEEE---DEGVKSDQAEEGGSEKEGSSEKDEGE 557 Query: 193 ASLKNETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPKESKGDE 372 + ET E + +E + K E E K ++ +K E E E ++P E + Sbjct: 558 QEEEGETEAEGEGEEAEAKEEKKTEGKVEEMAIKEEIKVEKPEKAKSPVPKSPVEEVKPK 617 Query: 373 THLKHETPIEPKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQPEVD 552 K + +E+K + + K+ KE++ + E KD DK +K V + V+ Sbjct: 618 PEAKAGKDEQKEEEKVEEKKEVAKESPKEEKVEKKEEKPKDVPDK--KKAESPVKEKAVE 675 Query: 553 KSXXXXXXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEKEKPEEMKATT 732 + S + S+ D K+E+P + + KEK EE + Sbjct: 676 EMITITK-------------------SVKVSLEKDTKEEKPQQ--QEKVKEKAEEEGGSE 714 Query: 733 VEHVEHCPDSESALNKEIDNEHETKHNEAHSNEHNDKTETKE 858 E + P + I+ E E K E + + +E Sbjct: 715 EEVGDKSPQESKKEDIAINGEVEGKEEEEQETQEKGSGQEEE 756
>sp|P35663|CYLC1_HUMAN Cylicin-1 (Cylicin I) (Multiple-band polypeptide I) Length = 651 Score = 68.2 bits (165), Expect = 3e-11 Identities = 64/290 (22%), Positives = 127/290 (43%), Gaps = 5/290 (1%) Frame = +1 Query: 1 QMGSKFGKQKYDVKSKNDEHKELN-AEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKD 177 Q SK KY +K D K + + ++E+ D + ++ V + K K++ KD Sbjct: 270 QNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKD 329 Query: 178 SKEDEASLKNETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPKE 357 ++ +A ++ SK+ +KD + K + + K+ D K+ E D +A K+ Sbjct: 330 TESTDA--ESGDSKDERKDTKKDKKKLKKDDKKKDT-------KKYPESTDTESGDA-KD 379 Query: 358 SKGDETHLKHETPIEPKED---KDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPE 528 ++ D +LK + + K+ K +TD++ +L+ ++ + + KD K + + V Sbjct: 380 ARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKN 439 Query: 529 NVNQPEVDKSXXXXXXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEKEK 708 + + D D++ +DE K+ S D K+++ KN + E E Sbjct: 440 DEESTDADSEPKG----------DSKKGKKDEKKGKKDS-KKDDKKKDAKKNAESTEMES 488 Query: 709 PEEMKATTVEHVEHCPDSESALNKEIDNEHETKHNE-AHSNEHNDKTETK 855 E+K +H + S+ + K+ + E+ E S++ KT TK Sbjct: 489 DLELKKDK-KHSKEKKGSKKDIKKDARKDTESTDAEFDESSKTGFKTSTK 537
Score = 60.1 bits (144), Expect = 8e-09
Identities = 65/292 (22%), Positives = 129/292 (44%), Gaps = 14/292 (4%)
Frame = +1
Query: 28 KYDVKSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKN 207
K + K +D E + + K+ +K K + K++ V + T++ + +DE
Sbjct: 289 KKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTK 348
Query: 208 ETSKESKKDEDQ------PKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPK--ESK 363
+ K+ KKD+ + P++ DA + LK++ +++D+ K +A K S
Sbjct: 349 KDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDK-KKDAKKITFST 407
Query: 364 GDETHLK-HETPIEPKEDKDQHATDAQKDLKKEDEA-QSNNETSKDC-KDKSIEKVPENV 534
E+ L+ E+ + K+DK TD +K +K ++E+ +++E D K K EK +
Sbjct: 408 DSESELESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKD 467
Query: 535 NQPEVDKSXXXXXXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEKEKPE 714
++ + K D ELK + ++ ++ D+K++ K+ + + E E
Sbjct: 468 SKKDDKKKDAKKNAESTEMESDLELKKDKKHSKEKKGSKKDIKKDAR-KDTESTDAEFDE 526
Query: 715 EMKA---TTVEHVEHCPDSESALNKEIDNEHETKHNEAHSNEHNDKTETKET 861
K T+ + +SE +L K + K +E+ N K E E+
Sbjct: 527 SSKTGFKTSTKIKGSDTESEESLYKP---GAKKKIDESDGTSANSKMEGLES 575
Score = 55.5 bits (132), Expect = 2e-07
Identities = 64/294 (21%), Positives = 116/294 (39%), Gaps = 11/294 (3%)
Frame = +1
Query: 10 SKFGKQKYDVKSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKED 189
SK QK SKN + KN K D L T + ++E + D
Sbjct: 192 SKNCSQKDKKDSKNSKKTNTEFLHTKNNPKKD-LKRSKTSNDPISEICSENSLNVDFLML 250
Query: 190 EASLKNETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPKESKGD 369
+E+ + +N + N S + + K +T K +K+ D ++E K++K D
Sbjct: 251 VGQSDDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDA-ESEDSKDAKKD 309
Query: 370 ETHLKHETPIEPKED---KDQHATDAQ--------KDLKKEDEAQSNNETSKDCKDKSIE 516
+K + K+ KD +TDA+ KD KK+ + KD K K +
Sbjct: 310 SKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKD-----KKKLKKDDKKKDTK 364
Query: 517 KVPENVNQPEVDKSXXXXXXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQV 696
K PE+ + D N+ K +D +K+ + D + E K +
Sbjct: 365 KYPESTDTESGDAKDARNDSRNLKKASKNDDKKKD---AKKITFSTDSESELESKESQKD 421
Query: 697 EKEKPEEMKATTVEHVEHCPDSESALNKEIDNEHETKHNEAHSNEHNDKTETKE 858
EK+ ++ K + V++ +S A ++ + + K +E + + K + K+
Sbjct: 422 EKKDKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKK 475
Score = 52.0 bits (123), Expect = 2e-06
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Frame = +1
Query: 10 SKFGKQKYDVKS---KNDEHKELNAEEG-------KNEEKTDKLTEDVTKEEQVNESTKN 159
SK +K D K D EL ++E K + KTD EE + ++
Sbjct: 391 SKNDDKKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSEP 450
Query: 160 KEIPKDSKEDEA-----SLKNETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKED 324
K K K+DE S K++ K++KK+ + + E+ E K+D H K + K SK+D
Sbjct: 451 KGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHSKEK--KGSKKD 508
Query: 325 --EDQHKNEAPKESKGDE---THLKHETPIEPKEDKDQHATDAQKDLKKEDEAQSNNETS 489
+D K+ +++ DE T K T I+ + + + + KK DE+ + S
Sbjct: 509 IKKDARKDTESTDAEFDESSKTGFKTSTKIKGSDTESEESLYKPGAKKKIDESDGTSANS 568
Query: 490 K 492
K
Sbjct: 569 K 569
>sp|Q8WXA9|SFR12_HUMAN Splicing factor, arginine/serine-rich 12 (Serine-arginine-rich splicing regulatory protein 86) (SRrp86) (Splicing regulatory protein 508) (SRrp508) Length = 508 Score = 67.8 bits (164), Expect = 4e-11 Identities = 57/284 (20%), Positives = 122/284 (42%), Gaps = 10/284 (3%) Frame = +1 Query: 34 DVKSKNDEHKELNAEEGKNEEKTDKLTEDVTKE--EQVNESTKNKEIPKDSKEDEASLKN 207 D + HK+ + + + ++ + D K+ E++ E + KE ++ KE E + Sbjct: 231 DRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDRE-KEREREKER 289 Query: 208 ETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPKESKGDETHLKH 387 E KE K++D+ K + K+ + + E KE ++D D+ K + ++ K E Sbjct: 290 EKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEK--EQDKEKEREKDR 347 Query: 388 ETPIEPKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQPEVDKSXXX 567 I+ K KD+ + + ++S++ + + +S + P + + Sbjct: 348 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPR--TSKTIKRKSSR 405 Query: 568 XXXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEKEKPEEMKATTVEHVE 747 D + + E ++IS+ + + D EK E +T+++ E Sbjct: 406 SPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEK---LEKNSTSLKEKE 462 Query: 748 HCPDSESALNKEIDN-------EHETKHN-EAHSNEHNDKTETK 855 H + +S+++KE+D+ E++ +HN NE N T+T+ Sbjct: 463 HNKEPDSSVSKEVDDKDAPRTEENKIQHNGNCQLNEENLSTKTE 506
Score = 48.5 bits (114), Expect = 2e-05
Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Frame = +1
Query: 67 LNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNETSKESKKDEDQP 246
+ E GK+ E+ + T+ + S+K+ K S+ S + S+ +KD +
Sbjct: 177 IEPESGKSNERKGGRSRSHTRSKS-RSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRS 235
Query: 247 KNEAPNESKEDDAHL----------KNETLKESKEDEDQHKNEAPKESKGDETHLKHETP 396
K+ SK + + +T ++ KE E + + KE + ++ K +
Sbjct: 236 KSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKER 295
Query: 397 IEPKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQPEVDKS 558
+ K+ + D +KD +K+ E + E KD +DK EK + + E D+S
Sbjct: 296 GKNKDRDKEREKDREKDKEKDREREREKEHEKD-RDKEKEKEQDKEKEREKDRS 348
Score = 47.0 bits (110), Expect = 7e-05
Identities = 36/181 (19%), Positives = 72/181 (39%), Gaps = 4/181 (2%)
Frame = +1
Query: 22 KQKYDVKSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEAS- 198
K++ + K+ E E ++E+ DK E +E+ E ++KEI + K+D+ S
Sbjct: 303 KEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSR 362
Query: 199 ---LKNETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNEAPKESKGD 369
S+ S+ + + S K K S+ + +N+ K+ + +
Sbjct: 363 TPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKE 422
Query: 370 ETHLKHETPIEPKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQPEV 549
H+ + + + +T +K D + + S K+K K P++ EV
Sbjct: 423 RDHIS-------ERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEV 475
Query: 550 D 552
D
Sbjct: 476 D 476
>sp|Q92794|MYST3_HUMAN Histone acetyltransferase MYST3 (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Runt-related transcription factor binding protein 2) (Monocytic leukemia zinc finger protein) (Zinc finger protein 220) Length = 2004 Score = 66.6 bits (161), Expect = 8e-11 Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 14/246 (5%) Frame = +1 Query: 121 VTKEEQVNESTKNKEIPKDSKEDEASLKNETSKESKKDEDQPKNEAPNESKEDDAHLKNE 300 + + E+ E ++ +P++ KE+E E ++ED +E P S D ++ Sbjct: 1204 IQESEETVEPKEDMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPET 1263 Query: 301 TLKESKEDEDQHKNEAPKESKGDETHLKHETPIEPKEDKDQHATDAQKDLKKEDEAQSNN 480 KE + +E++ K +E + E + EP+E++D A AQ D D+ + Sbjct: 1264 ETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGH 1323 Query: 481 ETSKDCKDKSIEKVPENV-NQPEVDKS----XXXXXXXXXXXXXDNELKSEDENISKEHS 645 S K+ + E+V +P V +S + EL SE+E S + S Sbjct: 1324 LESTKKKELEEQPTREDVKEEPGVQESFLDANMQKSREKIKDKEETELDSEEEQPSHDTS 1383 Query: 646 IVPDVKQEEPVKNVDQVEKEKPEEMKATTVEHVEHCPDSE---------SALNKEIDNEH 798 +V E+ + D E++ + + ++ E P SE +L +E +EH Sbjct: 1384 VV----SEQMAGSEDDHEEDSHTKEELIELKEEEEIPHSELDLETVQAVQSLTQEESSEH 1439 Query: 799 ETKHNE 816 E + + Sbjct: 1440 EGAYQD 1445
Score = 59.3 bits (142), Expect = 1e-08
Identities = 58/269 (21%), Positives = 116/269 (43%), Gaps = 5/269 (1%)
Frame = +1
Query: 46 KNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNETSKES 225
K +E + AEE + E+ D + +V + S + K+ + +E K S+E
Sbjct: 1224 KEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQ 1283
Query: 226 KK-DEDQPKNEAPNESKEDDAHLKN-ETLKESKEDEDQHKNEAPKESKGDETHLKHETPI 399
++ +E+Q + E P +E+DA + + +DED E+ K+ + +E + +
Sbjct: 1284 RQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQPTREDVKE 1343
Query: 400 EPKEDK---DQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQPEVDKSXXXX 570
EP + D + +++ +K ++E + ++E + D S+ V E + E D
Sbjct: 1344 EPGVQESFLDANMQKSREKIKDKEETELDSEEEQPSHDTSV--VSEQMAGSEDDHEEDSH 1401
Query: 571 XXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEKEKPEEMKATTVEHVEH 750
ELK E+E E D++ + V+++ Q E + E E +
Sbjct: 1402 TKEELI-----ELKEEEEIPHSE----LDLETVQAVQSLTQEESSEHEGAYQDCEETLAA 1452
Query: 751 CPDSESALNKEIDNEHETKHNEAHSNEHN 837
C +S + D + + + H++EHN
Sbjct: 1453 CQTLQSYTQADEDPQ-MSMVEDCHASEHN 1480
Score = 50.8 bits (120), Expect = 5e-06
Identities = 50/240 (20%), Positives = 103/240 (42%), Gaps = 7/240 (2%)
Frame = +1
Query: 166 IPKDSKEDEASLKNETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKNE 345
IPK ++ + ET + ED P P E KE++ E E+ED +E
Sbjct: 1195 IPKAGRKPKIQESEETVEPK---EDMP---LPEERKEEEEMQAEAEEAEEGEEEDAASSE 1248
Query: 346 APKESKGDETHLKHETPIEPK-EDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKV 522
P S D ++ EP+ E++++ +++ + E+E Q E + ++ + +
Sbjct: 1249 VPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAET 1308
Query: 523 PENVNQPEVDKSXXXXXXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKN--VD-- 690
+N + D+ D L+S + +E DVK+E V+ +D
Sbjct: 1309 AQNDDHDADDED-------------DGHLESTKKKELEEQPTREDVKEEPGVQESFLDAN 1355
Query: 691 -QVEKEKPEEMKATTVEHVEHCPDSE-SALNKEIDNEHETKHNEAHSNEHNDKTETKETI 864
Q +EK ++ + T ++ E P + S +++++ + ++H+ E + + +E I
Sbjct: 1356 MQKSREKIKDKEETELDSEEEQPSHDTSVVSEQMAGSEDDHEEDSHTKEELIELKEEEEI 1415
Score = 38.5 bits (88), Expect = 0.024
Identities = 64/310 (20%), Positives = 122/310 (39%), Gaps = 41/310 (13%)
Frame = +1
Query: 52 DEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEAS----------- 198
DE +E EE +NE + ++ ++ + + +K KD +EDE S
Sbjct: 1068 DEEEE---EEDENELFpreYFRRLSSQDVLRCQSSSKRKSKDEEEDEESDDADDTPILKP 1124
Query: 199 -------------LKNETSKESKKDEDQPKNEA-------PNESKEDDAHLKNETLKESK 318
L+ +TS KK + PK ++ ++ L E + S
Sbjct: 1125 VSLLRKRDVKNSPLEPDTSTPLKKKKGWPKGKSRKPIHWKKRPGRKPGFKLSREIMPVST 1184
Query: 319 ED-EDQHKNEAPKESKGDETHLKHETPIEPKEDKDQHATDAQKDLKKEDEAQSNNETSKD 495
+ + PK + + ET +EPKED ++ K+E+E Q+ E +++
Sbjct: 1185 QACVIEPIVSIPKAGRKPKIQESEET-VEPKED-----MPLPEERKEEEEMQAEAEEAEE 1238
Query: 496 C--KDKSIEKVP-----ENVNQPEVDKSXXXXXXXXXXXXXDNELKSEDE--NISKEHSI 648
+D + +VP ++ N PE + + E++ E+E +S+E
Sbjct: 1239 GEEEDAASSEVPAASPADSSNSPETETK-------------EPEVEEEEEKPRVSEEQR- 1284
Query: 649 VPDVKQEEPVKNVDQVEKEKPEEMKATTVEHVEHCPDSESALNKEIDNEHETKHNEAHSN 828
+ EE + +++ E E+ E+ A T ++ +H D E D+ H +
Sbjct: 1285 ----QSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDE-------DDGHLESTKKKELE 1333
Query: 829 EHNDKTETKE 858
E + + KE
Sbjct: 1334 EQPTREDVKE 1343
Score = 34.3 bits (77), Expect = 0.46
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 21/155 (13%)
Frame = +1
Query: 55 EHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNET------- 213
E +E AEEG+NEE ++ E V +S ++ +DS E+ K E
Sbjct: 788 EEEEEEAEEGENEEPQ---CQERELEISVGKSVSHENKEQDSYSVESEKKPEVMAPVSST 844
Query: 214 --SKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDED-----QHKNEAPKESK--- 363
SK+ + P N P S+ KN +E D+D + + AP+E
Sbjct: 845 RLSKQVLPHDSLPANSQP--SRRGRWGRKNRKTQERFGDKDSKLLLEETSSAPQEQYGEC 902
Query: 364 GDETHLKHETPIEPKE----DKDQHATDAQKDLKK 456
G+++ E E +E ++Q + D + DL K
Sbjct: 903 GEKSEATQEQYTESEEQLVASEEQPSQDGKPDLPK 937
>sp|P53352|INCE_CHICK Inner centromere protein Length = 877 Score = 64.7 bits (156), Expect = 3e-10 Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 8/252 (3%) Frame = +1 Query: 40 KSKNDEHKELNAEEGK--NEEKTDKLTEDVTKEEQVNESTKNKEIPK----DSKEDEASL 201 K K +E K+ EE K EE+ K+ + + EQ+ E K + K D K ++A Sbjct: 524 KQKVEEEKKRRQEEAKLRREERLRKVLQARERAEQLEEERKRRIEQKLALFDEKTEKARE 583 Query: 202 KNETSKESKKDEDQPKNEAPNESKEDDAHLKNETLKESKEDEDQHKN--EAPKESKGDET 375 + ++ KK K E + D + + + +E+E +HK + KE + + Sbjct: 584 ERLAEEKIKKRAAAKKMEEAEARRRQDEEARKQKALQQEEEERRHKELMQKKKEEEQERA 643 Query: 376 HLKHETPIEPKEDKDQHATDAQKDLKKEDEAQSNNETSKDCKDKSIEKVPENVNQPEVDK 555 E +E + Q A + +++ KKE E + E + K + ++ + Q EV Sbjct: 644 RKIAEQRQAEQEREKQLAAEREQERKKEQERKKEEERIQAEKQREQQEKAARL-QKEV-- 700 Query: 556 SXXXXXXXXXXXXXDNELKSEDENISKEHSIVPDVKQEEPVKNVDQVEKEKPEEMKATTV 735 +L+ E E KE ++ ++K++E Q +K+ PEE KA V Sbjct: 701 -----------LAAKEQLQKEMEKKEKEEQLLAEMKRQE------QEQKKLPEEQKAKDV 743 Query: 736 EHVEHCPDSESA 771 +H + E++ Sbjct: 744 AQTQHLENKENS 755
Score = 46.2 bits (108), Expect = 1e-04
Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 48/219 (21%)
Frame = +1
Query: 40 KSKNDEHKELNAEEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNETSK 219
+ +++E ++ A + + EE+ K KEE+ + K E + +E E L E +
Sbjct: 607 RRQDEEARKQKALQQEEEERRHKELMQKKKEEEQERARKIAEQRQAEQEREKQLAAEREQ 666
Query: 220 ESKKDEDQPKN------EAPNESKEDDAHLKNETL-----------KESKED-------- 324
E KK++++ K E E +E A L+ E L K+ KE+
Sbjct: 667 ERKKEQERKKEEERIQAEKQREQQEKAARLQKEVLAAKEQLQKEMEKKEKEEQLLAEMKR 726
Query: 325 EDQHKNEAPKESKGDET----HLK-----------------HETPIEPKEDKDQHATDAQ 441
++Q + + P+E K + HL+ H+ P PK + + + D
Sbjct: 727 QEQEQKKLPEEQKAKDVAQTQHLENKENSPACNSYQMTPQYHKDPKPPKINPNNYGMDLN 786
Query: 442 KDLKKEDEAQSNNETSKDCKDKSIEK--VPENVNQPEVD 552
D +DE+Q + + + + N P VD
Sbjct: 787 SDDSTDDESQPRKPIPAWASGNQLSQAVIRQYYNPPNVD 825
Score = 40.8 bits (94), Expect = 0.005
Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 17/177 (9%)
Frame = +1
Query: 76 EEGKNEEKTDKLTEDVTKEEQVNESTKNKEIPKDSKEDEASLKNETSKESKKDEDQPKNE 255
EE + + D+ +Q E ++KE+ + KE+E + +++ + ++++ K
Sbjct: 601 EEAEARRRQDEEARKQKALQQEEEERRHKELMQKKKEEEQERARKIAEQRQAEQEREKQL 660
Query: 256 A----PNESKEDDAHLKNETLKESKEDEDQHK-NEAPKESKGDETHLKHETPIEPKED-- 414
A KE + + E ++ K+ E Q K KE + L+ E + KE+
Sbjct: 661 AAEREQERKKEQERKKEEERIQAEKQREQQEKAARLQKEVLAAKEQLQKEMEKKEKEEQL 720
Query: 415 ------KDQHATDAQKDLKKEDEAQS----NNETSKDCKDKSIEKVPENVNQPEVDK 555
++Q ++ K +D AQ+ N E S C S + P+ P+ K
Sbjct: 721 LAEMKRQEQEQKKLPEEQKAKDVAQTQHLENKENSPAC--NSYQMTPQYHKDPKPPK 775
Score = 35.4 bits (80), Expect = 0.21
Identities = 35/233 (15%), Positives = 86/233 (36%), Gaps = 1/233 (0%)
Frame = +1
Query: 124 TKEEQVNESTKNKEIPKDSKEDEASLKNETSKESKKDEDQPKNEAPNESKEDDAHLKNET 303
T + + + ++ P+ +S+ S+E +DE+ N P + L +
Sbjct: 320 TIRKSIARTVIKRKAPQKLSVSSSSVNGSGSEEVPEDEETVVNAGPPPVPQTPPKLDFQG 379
Query: 304 LKESKEDEDQHKNEAPKESKGDETHLKHETPIEPKEDKDQHATDAQKDLKKEDEAQSNNE 483
L+ S + ++NE +E+ +E L K +K Q + + A
Sbjct: 380 LRMSLRSQTVNRNEQQQETSNNECDLS-------KSEKTQEPPQSARRKTSYKRAVDQRY 432
Query: 484 TSKDCKDKSIEKVPENVNQPEVDKSXXXXXXXXXXXXXD-NELKSEDENISKEHSIVPDV 660
++ +D + + + P S + N+L ++ + I +
Sbjct: 433 DTQQAEDGGLSPLRKKTPSPPCPASKVVRPFKTFLHTVEKNQLLMTPSSVGRNGVIKSFI 492
Query: 661 KQEEPVKNVDQVEKEKPEEMKATTVEHVEHCPDSESALNKEIDNEHETKHNEA 819
K P+++ P+E + ++ + ++E ++++ E + + EA
Sbjct: 493 KYNTPLQH-------DPKEKERQKLQALRKKEEAEQLRKQKVEEEKKRRQEEA 538
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.291 0.115 0.297
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,156,509
Number of Sequences: 369166
Number of extensions: 838555
Number of successful extensions: 14565
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9424
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8550075140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.6 bits)
Cluster detail
