Planarian EST Database

DrC_00057

Cluster detail
GO Category : Not Available
Consensus Sequence :
>DrC_00057 GGTACGGAAGCAGTGCGGATATTTGGTCGTTCGGTGCGGTTATGGTCGAATTGATCACAG GAAAGGCTCCTCTGTTCTTCTTGGCATCATTCCAAGCTATTTATCGACTGGGAACGCAAA AGAAAATCGAATTCGCCTATCCATTGAAATGTTCCGATGCATTAAAATCGTTTGTGGATC CATGCCTCGATCCTGAACCTTTGAATCGGCCAACTGTAAAAGATTTAATGAAGCACGAGT TTCTTAACTCGGCTATGGAGGCTGACTAATTTACGTAGCGTGTTGACATATTTTCATGGA TAAATTAAAATAATACTTATATGTTACCTAAATAAATAAATAATTGTTCTTCG

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00057
         (353 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q03497|STE20_YEAST  Serine/threonine-protein kinase STE20       60   1e-09
sp|Q13153|PAK1_HUMAN  Serine/threonine-protein kinase PAK 1 ...    60   2e-09
sp|Q99683|M3K5_HUMAN  Mitogen-activated protein kinase kinas...    59   3e-09
sp|Q5F2E8|TAOK1_MOUSE  Serine/threonine-protein kinase TAO1 ...    59   3e-09
sp|Q9SZ67|WRK19_ARATH  Probable WRKY transcription factor 19...    59   3e-09
sp|Q7ZYJ0|TOK1B_XENLA  Serine/threonine-protein kinase TAO1-...    59   3e-09
sp|O88664|TAOK1_RAT  Serine/threonine-protein kinase TAO1 (T...    59   3e-09
sp|Q7L7X3|TAOK1_HUMAN  Serine/threonine-protein kinase TAO1 ...    59   4e-09
sp|P35465|PAK1_RAT  Serine/threonine-protein kinase PAK 1 (p...    59   4e-09
sp|O88643|PAK1_MOUSE  Serine/threonine-protein kinase PAK 1 ...    58   8e-09

>sp|Q03497|STE20_YEAST Serine/threonine-protein kinase STE20
          Length = 939

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 29/88 (32%), Positives = 47/88 (53%)
 Frame = +3

Query: 3    YGSSADIWSFGAVMVELITGKAPLFFLASFQAIYRLGTQKKIEFAYPLKCSDALKSFVDP 182
            YG   DIWS G +++E+I G+ P       +A+Y + T    +   P   S +LK F+D 
Sbjct: 791  YGPKVDIWSLGIMIIEMIEGEPPYLNETPLRALYLIATNGTPKLKEPENLSSSLKKFLDW 850

Query: 183  CLDPEPLNRPTVKDLMKHEFLNSAMEAD 266
            CL  EP +R +  +L+  E++    EA+
Sbjct: 851  CLCVEPEDRASATELLHDEYITEIAEAN 878

>sp|Q13153|PAK1_HUMAN Serine/threonine-protein kinase PAK 1 (p21-activated kinase 1)
           (PAK-1) (P65-PAK) (Alpha-PAK)
          Length = 545

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 29/84 (34%), Positives = 45/84 (53%)
 Frame = +3

Query: 3   YGSSADIWSFGAVMVELITGKAPLFFLASFQAIYRLGTQKKIEFAYPLKCSDALKSFVDP 182
           YG   DIWS G + +E+I G+ P       +A+Y + T    E   P K S   + F++ 
Sbjct: 441 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR 500

Query: 183 CLDPEPLNRPTVKDLMKHEFLNSA 254
           CLD +   R + K+L++H+FL  A
Sbjct: 501 CLDMDVEKRGSAKELLQHQFLKIA 524

>sp|Q99683|M3K5_HUMAN Mitogen-activated protein kinase kinase kinase 5 (MAPK/ERK kinase
            kinase 5) (MEK kinase 5) (MEKK 5) (Apoptosis
            signal-regulating kinase 1) (ASK-1)
          Length = 1374

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3    YGSSADIWSFGAVMVELITGKAPLFFLASFQ-AIYRLGTQKKIEFAYPLKCSDALKSFVD 179
            YG +ADIWS G  ++E+ TGK P + L   Q A++++G   K+    P   S   K+F+ 
Sbjct: 858  YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG-MFKVHPEIPESMSAEAKAFIL 916

Query: 180  PCLDPEPLNRPTVKDLMKHEFL 245
             C +P+P  R    DL+  EFL
Sbjct: 917  KCFEPDPDKRACANDLLVDEFL 938

>sp|Q5F2E8|TAOK1_MOUSE Serine/threonine-protein kinase TAO1 (Thousand and one amino acid
           protein 1)
          Length = 1001

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 29/81 (35%), Positives = 44/81 (54%)
 Frame = +3

Query: 3   YGSSADIWSFGAVMVELITGKAPLFFLASFQAIYRLGTQKKIEFAYPLKCSDALKSFVDP 182
           Y    D+WS G   +EL   K PLF + +  A+Y +  Q +       + SD  ++FVD 
Sbjct: 202 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPTLQSNEWSDYFRNFVDS 260

Query: 183 CLDPEPLNRPTVKDLMKHEFL 245
           CL   P +RPT ++L+KH F+
Sbjct: 261 CLQKIPQDRPTSEELLKHMFV 281

>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 (WRKY DNA-binding protein 19)
          Length = 1895

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = +3

Query: 3    YGSSADIWSFGAVMVELITGKAPLFFLASFQAIYRLGTQK--KIEFAYPLKCSDALKSFV 176
            YG+ ADIWS G  ++E++TG+ P   L    A+Y +GT K  KI     L   D    F+
Sbjct: 1799 YGTPADIWSLGCTVLEMLTGQIPYSDLEIGTALYNIGTGKLPKIPDILSLDARD----FI 1854

Query: 177  DPCLDPEPLNRPTVKDLMKHEFLN 248
              CL   P  RPT  +L+ H F+N
Sbjct: 1855 LTCLKVNPEERPTAAELLNHPFVN 1878

>sp|Q7ZYJ0|TOK1B_XENLA Serine/threonine-protein kinase TAO1-B (Thousand and one amino acid
           protein 1-B)
          Length = 1001

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 30/81 (37%), Positives = 43/81 (53%)
 Frame = +3

Query: 3   YGSSADIWSFGAVMVELITGKAPLFFLASFQAIYRLGTQKKIEFAYPLKCSDALKSFVDP 182
           Y    D+WS G   VEL   K PLF + +  A+Y +  Q +       + SD  ++FVD 
Sbjct: 202 YDGKVDVWSLGITCVELAERKPPLFNMNAMSALYHIA-QNESPTLQSTEWSDYFRNFVDS 260

Query: 183 CLDPEPLNRPTVKDLMKHEFL 245
           CL   P +RPT  +L+KH F+
Sbjct: 261 CLHKIPQDRPTSDELLKHMFV 281

>sp|O88664|TAOK1_RAT Serine/threonine-protein kinase TAO1 (Thousand and one amino acid
           protein 1)
          Length = 1001

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 29/81 (35%), Positives = 44/81 (54%)
 Frame = +3

Query: 3   YGSSADIWSFGAVMVELITGKAPLFFLASFQAIYRLGTQKKIEFAYPLKCSDALKSFVDP 182
           Y    D+WS G   +EL   K PLF + +  A+Y +  Q +       + SD  ++FVD 
Sbjct: 202 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPTLQSNEWSDYFRNFVDS 260

Query: 183 CLDPEPLNRPTVKDLMKHEFL 245
           CL   P +RPT ++L+KH F+
Sbjct: 261 CLQKIPQDRPTSEELLKHMFV 281

>sp|Q7L7X3|TAOK1_HUMAN Serine/threonine-protein kinase TAO1 (Thousand and one amino acid
           protein 1) (STE20-like kinase PSK2) (Kinase from chicken
           homolog B) (hKFC-B)
          Length = 1001

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 29/81 (35%), Positives = 44/81 (54%)
 Frame = +3

Query: 3   YGSSADIWSFGAVMVELITGKAPLFFLASFQAIYRLGTQKKIEFAYPLKCSDALKSFVDP 182
           Y    D+WS G   +EL   K PLF + +  A+Y +  Q +       + SD  ++FVD 
Sbjct: 202 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPTLQSNEWSDYFRNFVDS 260

Query: 183 CLDPEPLNRPTVKDLMKHEFL 245
           CL   P +RPT ++L+KH F+
Sbjct: 261 CLQKIPQDRPTSEELLKHIFV 281

>sp|P35465|PAK1_RAT Serine/threonine-protein kinase PAK 1 (p21-activated kinase 1)
           (PAK-1) (P68-PAK) (Alpha-PAK) (Protein kinase MUK2)
          Length = 544

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 28/84 (33%), Positives = 45/84 (53%)
 Frame = +3

Query: 3   YGSSADIWSFGAVMVELITGKAPLFFLASFQAIYRLGTQKKIEFAYPLKCSDALKSFVDP 182
           YG   DIWS G + +E+I G+ P       +A+Y + T    E   P K S   + F++ 
Sbjct: 440 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR 499

Query: 183 CLDPEPLNRPTVKDLMKHEFLNSA 254
           CL+ +   R + K+L++H+FL  A
Sbjct: 500 CLEMDVEKRGSAKELLQHQFLKIA 523

>sp|O88643|PAK1_MOUSE Serine/threonine-protein kinase PAK 1 (p21-activated kinase 1)
           (PAK-1) (P65-PAK) (Alpha-PAK) (CDC42/RAC effector kinase
           PAK-A)
          Length = 545

 Score = 57.8 bits (138), Expect = 8e-09
 Identities = 28/84 (33%), Positives = 44/84 (52%)
 Frame = +3

Query: 3   YGSSADIWSFGAVMVELITGKAPLFFLASFQAIYRLGTQKKIEFAYPLKCSDALKSFVDP 182
           YG   DIWS G + +E+I G+ P       +A+Y + T    E   P K S   + F+  
Sbjct: 441 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLQC 500

Query: 183 CLDPEPLNRPTVKDLMKHEFLNSA 254
           CL+ +   R + K+L++H+FL  A
Sbjct: 501 CLEMDVEKRGSAKELLQHQFLKIA 524

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,036,445
Number of Sequences: 369166
Number of extensions: 772439
Number of successful extensions: 2972
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2821
length of database: 68,354,980
effective HSP length: 85
effective length of database: 52,652,505
effective search space used: 1684880160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00057

Planaria EST Database

DrC_00057

BLASTX 2.2.13 [Nov-27-2005]

Cluster detail