Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_P10
(412 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q18473|YE15_CAEEL Hypothetical protein C35A5.5 in chromo... 28 5.5
sp|Q58368|Y958_METJA Hypothetical protein MJ0958 precursor 28 7.1
sp|Q10254|ALG10_SCHPO Alpha-1,2 glucosyltransferase ALG10 (... 28 9.3
>sp|Q18473|YE15_CAEEL Hypothetical protein C35A5.5 in chromosome V
Length = 520
Score = 28.5 bits (62), Expect = 5.5
Identities = 10/41 (24%), Positives = 25/41 (60%)
Frame = +1
Query: 61 SIILYFSMVFFCFYY*RITIKYTFYHSEVLQLFIKNISYLI 183
++++YF ++ CFY+ I F +++ + L++ +I Y +
Sbjct: 24 NVVIYFVLILICFYF---IIPIYFPNNDKMNLWLSSIKYYL 61
>sp|Q58368|Y958_METJA Hypothetical protein MJ0958 precursor
Length = 426
Score = 28.1 bits (61), Expect = 7.1
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = -2
Query: 195 EQTYY*IRNVFNKQLQNLRVIKSVFYSNPLIIETKKNHRKI*YNTLITNNLLISKIFIK 19
E++Y ++ +F + +++R+ + + L+IET +NH+ Y I N I +I +K
Sbjct: 323 EKSY--LKKIFGNKYESIRITDLAYNNGILLIETNENHKLHYY---IVKNNSIEEIKLK 376
>sp|Q10254|ALG10_SCHPO Alpha-1,2 glucosyltransferase ALG10 (Alpha-2-glucosyltransferase
ALG10) (Dolichyl-phosphoglucose-dependent
glucosyltransferase ALG10) (Asparagine-linked
glycosylation protein 10)
Length = 445
Score = 27.7 bits (60), Expect = 9.3
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 61 SIILYFSMVFFCFYY*RITIKYTFYH---SEVLQLFIKNISYLIISLL 195
S I YF FF F + IKY H S++L S+LI+S+L
Sbjct: 257 SQINYFLWFFFFFSFPSYIIKYLMSHSRRSKLLSAVFSKKSFLIVSVL 304
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,988,492
Number of Sequences: 369166
Number of extensions: 504552
Number of successful extensions: 720
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 68,354,980
effective HSP length: 99
effective length of database: 50,066,215
effective search space used: 1852449955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)