Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_O18
(759 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3... 121 2e-27
sp|Q9QXX0|JAG1_MOUSE Jagged-1 precursor (Jagged1) 67 5e-11
sp|P78504|JAG1_HUMAN Jagged-1 precursor (Jagged1) (hJ1) (CD... 67 5e-11
sp|Q63722|JAG1_RAT Jagged-1 precursor (Jagged1) 67 5e-11
sp|Q20191|NAS13_CAEEL Zinc metalloproteinase nas-13 precurs... 67 7e-11
sp|Q90Y54|JAG1B_BRARE Jagged-1b precursor (Jagged1b) (Jagged3) 65 2e-10
sp|P34269|TYR1_CAEEL Putative tyrosinase-like protein tyr-1... 60 6e-09
sp|P21783|NOTCH_XENLA Neurogenic locus notch protein homolo... 57 4e-08
sp|Q6DI48|DLLA_BRARE Delta-like protein A precursor (DeltaA... 57 5e-08
sp|Q90Y57|JAG1A_BRARE Jagged-1a precursor (Jagged1a) (Jagged1) 55 2e-07
>sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 precursor
Length = 683
Score = 121 bits (303), Expect = 2e-27
Identities = 64/193 (33%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Frame = +1
Query: 1 CTKWAREGLCEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASN 180
C W+ +G C+KN +M CK SC C N N C + H +C W+ GEC N
Sbjct: 469 CGPWSAKGECQKNPVYMNVWCKASCRQCTP---NYNINEECSDRHTNCAMWSRSGECNKN 525
Query: 181 PGYMLVSCKKACNVCGKENK-----------------------------------CADYR 255
P +M +C+ +C CG+ C +
Sbjct: 526 PLWMSENCRSSCQKCGRSRAATCGGGGGADSISNPTTMPPATNNGQQNTPCDSPMCYNED 585
Query: 256 KRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPS 435
+ CPI A+ G C S+P +M CK SCGVC + PC D + DCA WA EC N
Sbjct: 586 QCCPIWAQRGQCRSNPGYMTCQCKVSCGVCRPNYVYGPCADYHYDCAAWARRGECLKN-K 644
Query: 436 WMLYNCKKSCNHC 474
WM NC++SCN C
Sbjct: 645 WMPENCRRSCNTC 657
Score = 115 bits (289), Expect = 1e-25
Identities = 64/212 (30%), Positives = 88/212 (41%), Gaps = 36/212 (16%)
Frame = +1
Query: 118 NCLNSHESCDTWADRGECASNPGYMLVSCKKACNVC----GKENKCADYRKRCPIMAKYG 285
+C N +E C W+ +GEC NP YM V CK +C C +C+D C + ++ G
Sbjct: 461 SCFNENECCGPWSAKGECQKNPVYMNVWCKASCRQCTPNYNINEECSDRHTNCAMWSRSG 520
Query: 286 LCESDPRFMLQNCKESCGVC---------------------------DGSSKNRP----- 369
C +P +M +NC+ SC C + +N P
Sbjct: 521 ECNKNPLWMSENCRSSCQKCGRSRAATCGGGGGADSISNPTTMPPATNNGQQNTPCDSPM 580
Query: 370 CVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWAN 549
C + +Q C WA +C +NP +M CK SC CR + P C D C WA
Sbjct: 581 CYNEDQCCPIWAQRGQCRSNPGYMTCQCKVSCGVCRP---NYVYGP-CADYHYDCAAWAR 636
Query: 550 AGECQLNPGWAKQNCPFSCQHCGGCRDLIQNC 645
GEC N W +NC SC C + L C
Sbjct: 637 RGECLKNK-WMPENCRRSCNTCVNQQQLAARC 667
Score = 103 bits (258), Expect = 4e-22
Identities = 62/203 (30%), Positives = 89/203 (43%), Gaps = 35/203 (17%)
Frame = +1
Query: 223 CGKENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSK-NRPCVDANQDCAG 399
C EN+C C + G C+ +P +M CK SC C + N C D + +CA
Sbjct: 462 CFNENEC------CGPWSAKGECQKNPVYMNVWCKASCRQCTPNYNINEECSDRHTNCAM 515
Query: 400 WAASHECETNPSWMLYNCKKSCNHCRDAR---------LESISDPN-------------- 510
W+ S EC NP WM NC+ SC C +R +SIS+P
Sbjct: 516 WSRSGECNKNPLWMSENCRSSCQKCGRSRAATCGGGGGADSISNPTTMPPATNNGQQNTP 575
Query: 511 -----CKDLQIHCLYWANAGECQLNPGWAKQNCPFSCQHC------GGCRDLIQNCQNFA 657
C + C WA G+C+ NPG+ C SC C G C D +C +A
Sbjct: 576 CDSPMCYNEDQCCPIWAQRGQCRSNPGYMTCQCKVSCGVCRPNYVYGPCADYHYDCAAWA 635
Query: 658 NQGYCKTNEVYMNQSCKKTCGFC 726
+G C N+ +M ++C+++C C
Sbjct: 636 RRGECLKNK-WMPENCRRSCNTC 657
>sp|Q9QXX0|JAG1_MOUSE Jagged-1 precursor (Jagged1)
Length = 1218
Score = 67.0 bits (162), Expect = 5e-11
Identities = 67/296 (22%), Positives = 108/296 (36%), Gaps = 54/296 (18%)
Frame = +1
Query: 4 TKWAREGLCEKNFNFM--QKNCKFSCDACQDIGDGDN--------SNPNCLNSHESC--D 147
T W + LC+K+ N+ + C + C + G S PNC + +C D
Sbjct: 286 TNWGGQ-LCDKDLNYCGTHQPC-LNRGTCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSD 343
Query: 148 TWADRG---------ECASNPGYMLVSCKKACNVCGKENKCADYRKRCPIMAKYGLCESD 300
+RG EC +PG+ +C + C N + C + C
Sbjct: 344 PCHNRGSCKETSSGFECECSPGWTGPTCSTNIDDCSPNN--CSHGGTCQDLVNGFKCVCP 401
Query: 301 PRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRD 480
P++ + C+ C+ +PCV+A + C AS+ C+ P WM NC + N C
Sbjct: 402 PQWTGKTCQLDANECEA----KPCVNA-RSCKNLIASYYCDCLPGWMGQNCDININDCLG 456
Query: 481 ARLESISDPNCKDLQI-------------------------------HCLYWANAGECQL 567
+ +D +C+DL HC N +C
Sbjct: 457 ---QCQNDASCRDLVNGYRCICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLC 513
Query: 568 NPGWAKQNCPFSCQHC--GGCRDLIQNCQNFANQGYCKTNEVYMNQSCKKTCGFCR 729
G++ C +C C++ Q C N A+ +CK E Y ++C CR
Sbjct: 514 PTGFSGNLCQLDIDYCEPNPCQNGAQ-CYNRASDYFCKCPEDYEGKNCSHLKDHCR 568
Score = 38.9 bits (89), Expect = 0.015
Identities = 49/244 (20%), Positives = 81/244 (33%), Gaps = 9/244 (3%)
Frame = +1
Query: 1 CTKWAREGLCEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASN 180
C A + C+ ++ KNC D C+ +SC +
Sbjct: 540 CYNRASDYFCKCPEDYEGKNCSHLKDHCRT---------TTCEVIDSCTVAMASNDTPEG 590
Query: 181 PGYMLVSCKKACNVCGKENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSK 360
Y+ + NVCG KC K+ C+ + F C E+ C+ +
Sbjct: 591 VRYI------SSNVCGPHGKCKSQSG-----GKF-TCDCNKGFTGTYCHENINDCESN-- 636
Query: 361 NRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLY 540
PC + C S++C + W +C+ + N C ++ C+DL
Sbjct: 637 --PCKNGGT-CIDGVNSYKCICSDGWEGAHCENNINDC--SQNPCHYGGTCRDL------ 685
Query: 541 WANAGECQLNPGWAKQNC--------PFSCQHCGGCRDLIQNCQNFANQGYCKTN-EVYM 693
N C GW + C +C + G C D + + G+ T +
Sbjct: 686 -VNDFYCDCKNGWKGKTCHSRDSQCDEATCNNGGTCYDEVDTFKCMCPGGWEGTTCNIAR 744
Query: 694 NQSC 705
N SC
Sbjct: 745 NSSC 748
Score = 33.5 bits (75), Expect = 0.64
Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 9/166 (5%)
Frame = +1
Query: 28 CEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCK 207
C+ +M +NC + + C D S + +N + C PGY C+
Sbjct: 436 CDCLPGWMGQNCDININDCLGQCQNDASCRDLVNGYR----------CICPPGYAGDHCE 485
Query: 208 KACNVCGK---------ENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSK 360
+ + C +N+ ++ CP LC+ D + N
Sbjct: 486 RDIDECASNPCLNGGHCQNEINRFQCLCPTGFSGNLCQLDIDYCEPN------------- 532
Query: 361 NRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESI 498
PC + Q C A+ + C+ + NC +HCR E I
Sbjct: 533 --PCQNGAQ-CYNRASDYFCKCPEDYEGKNCSHLKDHCRTTTCEVI 575
>sp|P78504|JAG1_HUMAN Jagged-1 precursor (Jagged1) (hJ1) (CD339 antigen)
Length = 1218
Score = 67.0 bits (162), Expect = 5e-11
Identities = 67/296 (22%), Positives = 108/296 (36%), Gaps = 54/296 (18%)
Frame = +1
Query: 4 TKWAREGLCEKNFNFM--QKNCKFSCDACQDIGDGDN--------SNPNCLNSHESC--D 147
T W + LC+K+ N+ + C + C + G S PNC + +C D
Sbjct: 286 TNWGGQ-LCDKDLNYCGTHQPC-LNGGTCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSD 343
Query: 148 TWADRG---------ECASNPGYMLVSCKKACNVCGKENKCADYRKRCPIMAKYGLCESD 300
+RG EC +PG+ +C + C N + C + C
Sbjct: 344 PCHNRGSCKETSLGFECECSPGWTGPTCSTNIDDCSPNN--CSHGGTCQDLVNGFKCVCP 401
Query: 301 PRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRD 480
P++ + C+ C+ +PCV+A + C AS+ C+ P WM NC + N C
Sbjct: 402 PQWTGKTCQLDANECEA----KPCVNA-KSCKNLIASYYCDCLPGWMGQNCDININDCLG 456
Query: 481 ARLESISDPNCKDLQI-------------------------------HCLYWANAGECQL 567
+ +D +C+DL HC N +C
Sbjct: 457 ---QCQNDASCRDLVNGYRCICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLC 513
Query: 568 NPGWAKQNCPFSCQHC--GGCRDLIQNCQNFANQGYCKTNEVYMNQSCKKTCGFCR 729
G++ C +C C++ Q C N A+ +CK E Y ++C CR
Sbjct: 514 PTGFSGNLCQLDIDYCEPNPCQNGAQ-CYNRASDYFCKCPEDYEGKNCSHLKDHCR 568
Score = 33.5 bits (75), Expect = 0.64
Identities = 54/274 (19%), Positives = 94/274 (34%), Gaps = 40/274 (14%)
Frame = +1
Query: 28 CEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCK 207
C+ +M +NC + + C D S + +N + C PGY C+
Sbjct: 436 CDCLPGWMGQNCDININDCLGQCQNDASCRDLVNGYR----------CICPPGYAGDHCE 485
Query: 208 KACNVCGK---------ENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSK 360
+ + C +N+ ++ CP LC+ D + N
Sbjct: 486 RDIDECASNPCLNGGHCQNEINRFQCLCPTGFSGNLCQLDIDYCEPN------------- 532
Query: 361 NRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESI--------SDPNCK 516
PC + Q C A+ + C+ + NC +HCR E I S+ +
Sbjct: 533 --PCQNGAQ-CYNRASDYFCKCPEDYEGKNCSHLKDHCRTTPCEVIDSCTVAMASNDTPE 589
Query: 517 DLQI--------HCLYWANAG---ECQLNPGWAKQNCPFS--------CQHCGGCRDLIQ 639
++ H + +G C N G+ C + C++ G C D +
Sbjct: 590 GVRYISSNVCGPHGKCKSQSGGKFTCDCNKGFTGTYCHENINDCESNPCRNGGTCIDGVN 649
Query: 640 NCQNFANQG----YCKTNEVYMNQSCKKTCGFCR 729
+ + + G YC+TN +Q+ G CR
Sbjct: 650 SYKCICSDGWEGAYCETNINDCSQNPCHNGGTCR 683
>sp|Q63722|JAG1_RAT Jagged-1 precursor (Jagged1)
Length = 1219
Score = 67.0 bits (162), Expect = 5e-11
Identities = 67/296 (22%), Positives = 108/296 (36%), Gaps = 54/296 (18%)
Frame = +1
Query: 4 TKWAREGLCEKNFNFM--QKNCKFSCDACQDIGDGDN--------SNPNCLNSHESC--D 147
T W + LC+K+ N+ + C + C + G S PNC + +C D
Sbjct: 286 TNWGGQ-LCDKDLNYCGTHQPC-LNRGTCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSD 343
Query: 148 TWADRG---------ECASNPGYMLVSCKKACNVCGKENKCADYRKRCPIMAKYGLCESD 300
+RG EC +PG+ +C + C N + C + C
Sbjct: 344 PCHNRGSCKETSSGFECECSPGWTGPTCSTNIDDCSPNN--CSHGGTCQDLVNGFKCVCP 401
Query: 301 PRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRD 480
P++ + C+ C+ +PCV+A + C AS+ C+ P WM NC + N C
Sbjct: 402 PQWTGKTCQLDANECEA----KPCVNA-RSCKNLIASYYCDCLPGWMGQNCDININDCLG 456
Query: 481 ARLESISDPNCKDLQI-------------------------------HCLYWANAGECQL 567
+ +D +C+DL HC N +C
Sbjct: 457 ---QCQNDASCRDLVNGYRCICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLC 513
Query: 568 NPGWAKQNCPFSCQHC--GGCRDLIQNCQNFANQGYCKTNEVYMNQSCKKTCGFCR 729
G++ C +C C++ Q C N A+ +CK E Y ++C CR
Sbjct: 514 PTGFSGNLCQLDIDYCEPNPCQNGAQ-CYNRASDYFCKCPEDYEGKNCSHLKDHCR 568
Score = 43.9 bits (102), Expect = 5e-04
Identities = 59/270 (21%), Positives = 92/270 (34%), Gaps = 42/270 (15%)
Frame = +1
Query: 22 GLCEKNFNFMQKNCK--FSCDACQDIGDGDNSNPNCLNSHESCDTWAD------------ 159
G C+ N Q C FS + CQ D NP C N + + +D
Sbjct: 500 GHCQNEINRFQCLCPTGFSGNLCQLDIDYCEPNP-CQNGAQCYNRASDYFCKCPEDYEGK 558
Query: 160 -----RGECASNPGYMLVSCKKAC--------------NVCGKENKCADYRKRCPIMAKY 282
+ C + P ++ SC A NVCG KC + K+
Sbjct: 559 NCSHLKDHCRTTPCEVIDSCTVAMASNDTPEGVRYISSNVCGPHGKC-----KSESGGKF 613
Query: 283 GLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKS 462
C+ + F C E+ C+G+ PC + C S++C + W +C+ +
Sbjct: 614 -TCDCNKGFTGTYCHENINDCEGN----PCTNGGT-CIDGVNSYKCICSDGWEGAHCENN 667
Query: 463 CNHCRDARLESISDPNCKDLQIHCLYWANAGECQLNPGWAKQNC--------PFSCQHCG 618
N C ++ C+DL N C GW + C +C + G
Sbjct: 668 INDC--SQNPCHYGGTCRDL-------VNDFYCDCKNGWKGKTCHSRDSQCDEATCNNGG 718
Query: 619 GCRDLIQNCQNFANQGYCKTN-EVYMNQSC 705
C D + + G+ T + N SC
Sbjct: 719 TCYDEVDTFKCMCPGGWEGTTCNIARNSSC 748
Score = 33.1 bits (74), Expect = 0.83
Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 9/166 (5%)
Frame = +1
Query: 28 CEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCK 207
C+ +M +NC + + C D S + +N + C PGY C+
Sbjct: 436 CDCLPGWMGQNCDININDCLGQCQNDASCRDLVNGYR----------CICPPGYAGDHCE 485
Query: 208 KACNVCGK---------ENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSK 360
+ + C +N+ ++ CP LC+ D + N
Sbjct: 486 RDIDECASNPCLNGGHCQNEINRFQCLCPTGFSGNLCQLDIDYCEPN------------- 532
Query: 361 NRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESI 498
PC + Q C A+ + C+ + NC +HCR E I
Sbjct: 533 --PCQNGAQ-CYNRASDYFCKCPEDYEGKNCSHLKDHCRTTPCEVI 575
>sp|Q20191|NAS13_CAEEL Zinc metalloproteinase nas-13 precursor (Nematode astacin 13)
Length = 527
Score = 66.6 bits (161), Expect = 7e-11
Identities = 36/84 (42%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +1
Query: 238 KCADYRKRCPIMAKYGLCES--DPRFMLQNCKESCGVCDGSSKNRP-CVDANQDCAGWAA 408
KC D RK C +A+ G CES RFM +NC SCG C K + C DA C WA
Sbjct: 444 KCEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKCIAEEKRKEVCEDARTWCERWAN 503
Query: 409 SHECETN--PSWMLYNCKKSCNHC 474
S C +M C KSCN C
Sbjct: 504 SGMCNQTVFKDYMRQKCAKSCNFC 527
Score = 49.3 bits (116), Expect = 1e-05
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Frame = +1
Query: 511 CKDLQIHCLYWANAGECQ--LNPGWAKQNCPFSCQHCGG-------CRDLIQNCQNFANQ 663
C+D + C + A AG C+ + + +NC SC C C D C+ +AN
Sbjct: 445 CEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKCIAEEKRKEVCEDARTWCERWANS 504
Query: 664 GYCKTN--EVYMNQSCKKTCGFC 726
G C + YM Q C K+C FC
Sbjct: 505 GMCNQTVFKDYMRQKCAKSCNFC 527
Score = 47.8 bits (112), Expect = 3e-05
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +1
Query: 1 CTKWAREGLCEKNFN--FMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECA 174
C AR G CE F+ FM +NC SC C I + + C ++ C+ WA+ G C
Sbjct: 452 CEFLARAGHCESRFSIRFMTENCANSCGKC--IAE-EKRKEVCEDARTWCERWANSGMCN 508
Query: 175 SN--PGYMLVSCKKACNVC 225
YM C K+CN C
Sbjct: 509 QTVFKDYMRQKCAKSCNFC 527
Score = 47.4 bits (111), Expect = 4e-05
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +1
Query: 370 CVDANQDCAGWAASHECETNPS--WMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYW 543
C D +DC A + CE+ S +M NC SC C E C+D + C W
Sbjct: 445 CEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKCI---AEEKRKEVCEDARTWCERW 501
Query: 544 ANAGECQ--LNPGWAKQNCPFSCQHC 615
AN+G C + + +Q C SC C
Sbjct: 502 ANSGMCNQTVFKDYMRQKCAKSCNFC 527
Score = 42.0 bits (97), Expect = 0.002
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Frame = +1
Query: 121 CLNSHESCDTWADRGECASNPG--YMLVSCKKACNVCGKENK----CADYRKRCPIMAKY 282
C + + C+ A G C S +M +C +C C E K C D R C A
Sbjct: 445 CEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKCIAEEKRKEVCEDARTWCERWANS 504
Query: 283 GLCESD--PRFMLQNCKESCGVC 345
G+C +M Q C +SC C
Sbjct: 505 GMCNQTVFKDYMRQKCAKSCNFC 527
Score = 31.2 bits (69), Expect = 3.2
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 616 GGCRDLIQNCQNFANQGYCKT--NEVYMNQSCKKTCGFC 726
G C D ++C+ A G+C++ + +M ++C +CG C
Sbjct: 443 GKCEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKC 481
>sp|Q90Y54|JAG1B_BRARE Jagged-1b precursor (Jagged1b) (Jagged3)
Length = 1213
Score = 65.5 bits (158), Expect = 2e-10
Identities = 61/280 (21%), Positives = 99/280 (35%), Gaps = 38/280 (13%)
Frame = +1
Query: 4 TKWAREGLCEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNP 183
T W + LC+K+ N+ ++ CLN +T D+ +C+
Sbjct: 283 TNWGGQ-LCDKDLNYC------------------GTHQPCLNGGTCSNTGPDKYQCSCED 323
Query: 184 GYMLVSCKKACNVCGKENKCAD----------YRKRC-----------------PIMAKY 282
GY V+C++A + C N CA+ Y C P K+
Sbjct: 324 GYSGVNCERAEHAC-LSNPCANGGTCKETSQGYECHCAIGWSGTSCEINVDDCTPNQCKH 382
Query: 283 G----------LCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNP 432
G C P + + C+ C+ ++PCV+A + C ++ CE P
Sbjct: 383 GGTCQDLVNGFKCACPPHWTGKTCQIDANECE----DKPCVNA-KSCHNLIGAYFCECLP 437
Query: 433 SWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWANAGECQLNPGWAKQNCPFSCQH 612
W NC + N C+ + ++ CKDL N C PG+ + C
Sbjct: 438 GWSGQNCDININDCKG---QCLNGGTCKDL-------VNGYRCLCPPGYTGEQCEKDVDE 487
Query: 613 CGGCRDLI-QNCQNFANQGYCKTNEVYMNQSCKKTCGFCR 729
C L CQ+ N C + Q C+ +C+
Sbjct: 488 CASSPCLNGGRCQDEVNGFQCLCPAGFSGQLCQLDIDYCK 527
Score = 34.7 bits (78), Expect = 0.29
Identities = 53/285 (18%), Positives = 87/285 (30%), Gaps = 52/285 (18%)
Frame = +1
Query: 28 CEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCK 207
CE + +NC + + C+ CLN +C + C PGY C+
Sbjct: 433 CECLPGWSGQNCDININDCKG---------QCLNGG-TCKDLVNGYRCLCPPGYTGEQCE 482
Query: 208 KACNVCGKE-----NKCAD----YRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSK 360
K + C +C D ++ CP LC+ D + N ++ C +
Sbjct: 483 KDVDECASSPCLNGGRCQDEVNGFQCLCPAGFSGQLCQLDIDYCKPNPCQNGAQCFNLAS 542
Query: 361 NRPCVDANQDCAGWAASH---ECETN-----------------PSWMLYNCKKSCN---- 468
+ C D G SH C T P + Y C
Sbjct: 543 DYFC-KCPDDYEGKNCSHLKDHCRTTSCQVIDSCTVAVASNSTPEGVRYISSNVCGPHGR 601
Query: 469 -----------HCRDARLESISDPNCKDLQIH-------CLYWANAGECQLNPGWAKQNC 594
C++ + N D + + C+ N +C GW +C
Sbjct: 602 CRSQAGGQFTCECQEGFRGTYCHENINDCESNPCRNGGTCIDKVNVYQCICADGWEGVHC 661
Query: 595 PFSCQHCGGCRDLIQN-CQNFANQGYCKTNEVYMNQSCKKTCGFC 726
+ C L + CQ+ N YC+ + ++C C
Sbjct: 662 EINIDDCSLNPCLNKGACQDLVNDFYCECRNGWKGKTCHSRDSQC 706
Score = 33.5 bits (75), Expect = 0.64
Identities = 31/161 (19%), Positives = 54/161 (33%)
Frame = +1
Query: 1 CTKWAREGLCEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASN 180
C + CE + K C C + N+ +C D +C +
Sbjct: 679 CQDLVNDFYCECRNGWKGKTCHSRDSQCDEA---------TCNNGGTCHDEGDTFKCRCS 729
Query: 181 PGYMLVSCKKACNVCGKENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSK 360
PG+ +C A N N C + C + C + C E+ C+
Sbjct: 730 PGWEGATCNIAKNSSCLPNPC-ENGGTCVVNGDSFNCVCKEGWEGSTCTENTNDCN---- 784
Query: 361 NRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDA 483
PC ++ C + CE P + +C+ + N C+ +
Sbjct: 785 PHPCYNSG-TCVDGENWYRCECAPGFAGPDCRININECQSS 824
>sp|P34269|TYR1_CAEEL Putative tyrosinase-like protein tyr-1 precursor
Length = 601
Score = 60.1 bits (144), Expect = 6e-09
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +1
Query: 232 ENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAAS 411
++ C + C ++ C ++ +M + C++SCG+C + NR C D + CA W
Sbjct: 477 QSNCYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQSNDNNRGCHDRHISCAYWRGQ 536
Query: 412 HECETNPSWMLYNCKKSCNHC 474
+ C WM NC+ +C C
Sbjct: 537 NFCTRRRQWMAENCQATCGWC 557
Score = 58.9 bits (141), Expect = 1e-08
Identities = 29/98 (29%), Positives = 43/98 (43%)
Frame = +1
Query: 370 CVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWAN 549
C + + C W+ +EC TN +M C+KSC C+ + ++ C D I C YW
Sbjct: 480 CYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQ----SNDNNRGCHDRHISCAYWRG 535
Query: 550 AGECQLNPGWAKQNCPFSCQHCGGCRDLIQNCQNFANQ 663
C W +NC +C C + Q C + A Q
Sbjct: 536 QNFCTRRRQWMAENCQATCGWCN--MNEAQLCASVARQ 571
Score = 57.0 bits (136), Expect = 5e-08
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +1
Query: 118 NCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKENK---CADYRKRCPIMAKYGL 288
NC N C+ W+ + EC +N YM C+K+C +C + C D C
Sbjct: 479 NCYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQSNDNNRGCHDRHISCAYWRGQNF 538
Query: 289 CESDPRFMLQNCKESCGVCD 348
C ++M +NC+ +CG C+
Sbjct: 539 CTRRRQWMAENCQATCGWCN 558
Score = 55.5 bits (132), Expect = 2e-07
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +1
Query: 1 CTKWAREGLCEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASN 180
C +W+R+ C N +M + C+ SC CQ +++N C + H SC W + C
Sbjct: 487 CNQWSRQNECRTNTVYMNRYCRKSCGLCQ----SNDNNRGCHDRHISCAYWRGQNFCTRR 542
Query: 181 PGYMLVSCKKACNVCGKEN-----KCADYRKRCPIMAKYGLCESD 300
+M +C+ C C A +R AK+ L E D
Sbjct: 543 RQWMAENCQATCGWCNMNEAQLCASVARQSRRVRRNAKFWLTEPD 587
Score = 50.4 bits (119), Expect = 5e-06
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +1
Query: 508 NCKDLQIHCLYWANAGECQLNPGWAKQNCPFSCQHCG------GCRDLIQNCQNFANQGY 669
NC + C W+ EC+ N + + C SC C GC D +C + Q +
Sbjct: 479 NCYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQSNDNNRGCHDRHISCAYWRGQNF 538
Query: 670 CKTNEVYMNQSCKKTCGFC 726
C +M ++C+ TCG+C
Sbjct: 539 CTRRRQWMAENCQATCGWC 557
Score = 42.4 bits (98), Expect = 0.001
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 643 CQNFANQGYCKTNEVYMNQSCKKTCGFCR 729
C ++ Q C+TN VYMN+ C+K+CG C+
Sbjct: 487 CNQWSRQNECRTNTVYMNRYCRKSCGLCQ 515
>sp|P21783|NOTCH_XENLA Neurogenic locus notch protein homolog precursor (XOTCH protein)
Length = 2524
Score = 57.4 bits (137), Expect = 4e-08
Identities = 58/242 (23%), Positives = 91/242 (37%), Gaps = 7/242 (2%)
Frame = +1
Query: 22 GLCEKNFNFMQKNCK----FSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGY 189
G CE + + C+ ++ D+CQ D SNP C N + C + + C PG+
Sbjct: 115 GTCELLNSVTEYKCRCPPGWTGDSCQQ-ADPCASNP-CANGGK-CLPFEIQYICKCPPGF 171
Query: 190 MLVSCKKACNVCGKENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRP 369
+CK+ N C +N C + + Y C RF +NC E C+ S P
Sbjct: 172 HGATCKQDINECS-QNPCKNGGQCINEFGSYR-CTCQNRFTGRNCDEPYVPCNPS----P 225
Query: 370 CVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWAN 549
C++ S++C P + NC+++ + C NC++ C+ N
Sbjct: 226 CLNGGTCRQTDDTSYDCTCLPGFSGQNCEENIDDC--------PSNNCRNGGT-CVDGVN 276
Query: 550 AGECQLNPGWAKQNCPFSCQHCGGCRDLIQN---CQNFANQGYCKTNEVYMNQSCKKTCG 720
CQ P W Q C C + QN C N C + + C +
Sbjct: 277 TYNCQCPPDWTGQYCTEDVDECQLMPNACQNGGTCHNTYGGYNCVCVNGWTGEDCSENID 336
Query: 721 FC 726
C
Sbjct: 337 DC 338
Score = 44.3 bits (103), Expect = 4e-04
Identities = 46/210 (21%), Positives = 77/210 (36%), Gaps = 2/210 (0%)
Frame = +1
Query: 106 NSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKENKCADYRKRCPIMAKYG 285
NSNP C+ H +C + +C G+ +C N C + N C + C M
Sbjct: 720 NSNP-CI--HGACHDGVNGYKCDCEAGWSGSNCDINNNEC-ESNPCMN-GGTCKDMTGAY 774
Query: 286 LCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSC 465
+C F NC+ + C + PC++ + C A ++C + C+
Sbjct: 775 ICTCKAGFSGPNCQTNINECSSN----PCLN-HGTCIDDVAGYKCNCMLPYTGAICEAVL 829
Query: 466 NHCRDARLESISDPNCKDLQIHCLYWANAGECQLNPGWAKQNCPFSCQHCGG--CRDLIQ 639
C + ++ CK+ + + C+ PGW Q C C CR+
Sbjct: 830 APCAGSPCKN--GGRCKESEDFETF-----SCECPPGWQGQTCEIDMNECVNRPCRN-GA 881
Query: 640 NCQNFANQGYCKTNEVYMNQSCKKTCGFCR 729
CQN C Y ++C+ C+
Sbjct: 882 TCQNTNGSYKCNCKPGYTGRNCEMDIDDCQ 911
Score = 43.1 bits (100), Expect = 8e-04
Identities = 53/224 (23%), Positives = 78/224 (34%), Gaps = 3/224 (1%)
Frame = +1
Query: 28 CEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCK 207
C + +NC+ D CQ PN ++ SC + C G+ C+
Sbjct: 892 CNCKPGYTGRNCEMDIDDCQ---------PNPCHNGGSCSDGINMFFCNCPAGFRGPKCE 942
Query: 208 KACNVCGKENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQ 387
+ N C N C + C C P F +C+ + C SS C +
Sbjct: 943 EDINECA-SNPCKN-GANCTDCVNSYTCTCQPGFSGIHCESNTPDCTESS----CFNGG- 995
Query: 388 DCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWANAGECQL 567
C + C+ P + C+ N C S P CL N G CQ
Sbjct: 996 TCIDGINTFTCQCPPGFTGSYCQHDINECD-------SKP--------CL---NGGTCQD 1037
Query: 568 NPGWAKQNCPFSCQHCGGCRDLIQNCQN--FANQGYC-KTNEVY 690
+ G K CP C++L++ C + N G C +TN Y
Sbjct: 1038 SYGTYKCTCPQGYTGL-NCQNLVRWCDSSPCKNGGKCWQTNNFY 1080
Score = 40.8 bits (94), Expect = 0.004
Identities = 63/248 (25%), Positives = 80/248 (32%), Gaps = 31/248 (12%)
Frame = +1
Query: 58 NCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCK---KAC--NV 222
NC+ D C SN L + C D EC PGY C C N
Sbjct: 636 NCETKIDDCA-------SN---LCDNGKCIDKIDGYECTCEPGYTGKLCNININECDSNP 685
Query: 223 CGKENKCAD----YRKRCPIMAKYGLCESDPRFMLQNCKES-C--GVCDGSSKNRPCVDA 381
C C D + CP +C S+ + C + C G C C
Sbjct: 686 CRNGGTCKDQINGFTCVCPDGYHDHMCLSE----VNECNSNPCIHGACHDGVNGYKC--- 738
Query: 382 NQDC-AGWAAS------HECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLY 540
DC AGW+ S +ECE+NP CK S PNC+
Sbjct: 739 --DCEAGWSGSNCDINNNECESNPCMNGGTCKDMTGAYICTCKAGFSGPNCQ-------- 788
Query: 541 WANAGECQLNP---------GWAKQNCPFSCQHCGG-CRDLIQNCQN--FANQGYCKTNE 684
N EC NP A C + G C ++ C N G CK +E
Sbjct: 789 -TNINECSSNPCLNHGTCIDDVAGYKCNCMLPYTGAICEAVLAPCAGSPCKNGGRCKESE 847
Query: 685 VYMNQSCK 708
+ SC+
Sbjct: 848 DFETFSCE 855
Score = 39.7 bits (91), Expect = 0.009
Identities = 45/216 (20%), Positives = 72/216 (33%), Gaps = 13/216 (6%)
Frame = +1
Query: 22 GLCEK--NFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYML 195
G+C N +F + ++ C++ D +PN + +C + C GY
Sbjct: 1119 GMCVDTGNTHFCRCQAGYTGSYCEE--QVDECSPNPCQNGATCTDYLGGYSCECVAGYHG 1176
Query: 196 VSCKKACN-----VCGKENKCAD----YRKRCPIMAKYGLCESDPRFMLQNCKESCGVCD 348
V+C + N C C D Y+ CP + CE N + D
Sbjct: 1177 VNCSEEINECLSHPCQNGGTCIDLINTYKCSCPRGTQGVHCEI-------NVDDCTPFYD 1229
Query: 349 GSSKNRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQI 528
+ C + N C + C P ++ C+ N C +S NC L
Sbjct: 1230 SFTLEPKCFN-NGKCIDRVGGYNCICPPGFVGERCEGDVNECLSNPCDSRGTQNCIQL-- 1286
Query: 529 HCLYWANAGECQLNPGWAKQNCPFSCQHCGG--CRD 630
N C+ G+ + C C G CR+
Sbjct: 1287 -----VNDYRCECRQGFTGRRCESVVDGCKGMPCRN 1317
Score = 38.5 bits (88), Expect = 0.020
Identities = 59/240 (24%), Positives = 84/240 (35%), Gaps = 37/240 (15%)
Frame = +1
Query: 109 SNPNCLNSHESCDTWADRGE--CASNPGYM-------LVSCKKACNVCGKENKCAD---- 249
SNP N +CDT G+ C PGY + C N C +C +
Sbjct: 377 SNP--CNEGSNCDTNPVNGKAICTCPPGYTGPACNNDVDECSLGANPCEHGGRCTNTLGS 434
Query: 250 YRKRCPIMAKYGLCESDPRFMLQN-------CKESCG----VCDGSSKNRPCVDANQDCA 396
++ CP CE D L N C + G +C + C +CA
Sbjct: 435 FQCNCPQGYAGPRCEIDVNECLSNPCQNDSTCLDQIGEFQCICMPGYEGLYCETNIDECA 494
Query: 397 GWAASH--ECETNPSWMLYNCKK--SCNHCRDARLESISDPNCKDLQIHCLYWANAGECQ 564
H +C + +C S N C+ E S P CK+ CL N+ CQ
Sbjct: 495 SNPCLHNGKCIDKINEFRCDCPTGFSGNLCQHDFDECTSTP-CKN-GAKCLDGPNSYTCQ 552
Query: 565 LNPGWAKQNC--------PFSCQHCGGCRDLIQNCQNFANQGYC-KTNEVYMNQSCKKTC 717
G+ ++C P C H G C+D I GY + + +N+ K C
Sbjct: 553 CTEGFTGRHCEQDINECIPDPC-HYGTCKDGIATFTCLCRPGYTGRLCDNDINECLSKPC 611
Score = 37.4 bits (85), Expect = 0.044
Identities = 60/277 (21%), Positives = 93/277 (33%), Gaps = 45/277 (16%)
Frame = +1
Query: 22 GLCEKNFNFMQKNC--KFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYML 195
G C F + C +F+ C + N +P CLN T +C PG+
Sbjct: 192 GQCINEFGSYRCTCQNRFTGRNCDEPYVPCNPSP-CLNGGTCRQTDDTSYDCTCLPGFSG 250
Query: 196 VSCKKACNVCGKEN-----KCAD----YRKRCPI--MAKYGLCESDPRFMLQNCKESCGV 342
+C++ + C N C D Y +CP +Y + D ++ N ++ G
Sbjct: 251 QNCEENIDDCPSNNCRNGGTCVDGVNTYNCQCPPDWTGQYCTEDVDECQLMPNACQNGGT 310
Query: 343 CDGSSKNRPCVDAN-----------QDCAGWAASHECETNPSWMLYNCKKSCNHCRDARL 489
C + CV N DCA A + + C+ C H R L
Sbjct: 311 CHNTYGGYNCVCVNGWTGEDCSENIDDCANAACHSGATCHDRVASFYCE--CPHGRTGLL 368
Query: 490 -----ESISDP-----NCKDLQIHCLYWANAGECQLNPGWAKQNCPFS----------CQ 609
IS+P NC ++ C PG+ C C+
Sbjct: 369 CHLDNACISNPCNEGSNCDTNPVN-----GKAICTCPPGYTGPACNNDVDECSLGANPCE 423
Query: 610 HCGGCRDLIQNCQNFANQGYCKTN-EVYMNQSCKKTC 717
H G C + + + Q QGY E+ +N+ C
Sbjct: 424 HGGRCTNTLGSFQCNCPQGYAGPRCEIDVNECLSNPC 460
>sp|Q6DI48|DLLA_BRARE Delta-like protein A precursor (DeltaA protein)
Length = 772
Score = 57.0 bits (136), Expect = 5e-08
Identities = 54/224 (24%), Positives = 81/224 (36%), Gaps = 9/224 (4%)
Frame = +1
Query: 85 QDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKENKCADYRKRC 264
QD+ + P CLN +T C+ PG+ SC+ N C N C + C
Sbjct: 289 QDLNYCTHHKP-CLNGATCSNTGQGSYTCSCRPGFSGASCEIEVNEC-TGNPCRN-GGSC 345
Query: 265 PIMAKYGLCESDPRFMLQNCKESCGVC-DGSSKNRPCVDANQDCAGWAASHECETNPSWM 441
M C P F +NC+ S C DG PC + + + C+ +
Sbjct: 346 TDMENTYSCTCPPGFYGKNCELSAMTCADG-----PCFNGGRCADNPDGGYFCQCPTGYA 400
Query: 442 LYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWANAGECQLNPGWAKQNCP-------- 597
+NC+K +HC S C + C+ N+ CQ G+ NC
Sbjct: 401 GFNCEKKIDHC--------SSSPCSN-GARCVDLVNSYLCQCPDGFTGMNCDRAGDECSM 451
Query: 598 FSCQHCGGCRDLIQNCQNFANQGYCKTNEVYMNQSCKKTCGFCR 729
+ CQ+ G CQ A+ C Y ++C C+
Sbjct: 452 YPCQNGG-------TCQEGASGYMCTCPPGYTGRNCSSPVSRCQ 488
Score = 42.0 bits (97), Expect = 0.002
Identities = 37/159 (23%), Positives = 53/159 (33%)
Frame = +1
Query: 1 CTKWAREGLCEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASN 180
CT C F KNC+ S C D C N D C
Sbjct: 345 CTDMENTYSCTCPPGFYGKNCELSAMTCAD--------GPCFNGGRCADNPDGGYFCQCP 396
Query: 181 PGYMLVSCKKACNVCGKENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSK 360
GY +C+K + C + C++ RC + LC+ F NC + C
Sbjct: 397 TGYAGFNCEKKIDHC-SSSPCSN-GARCVDLVNSYLCQCPDGFTGMNCDRAGDEC----S 450
Query: 361 NRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCR 477
PC + C A+ + C P + NC + C+
Sbjct: 451 MYPCQNGG-TCQEGASGYMCTCPPGYTGRNCSSPVSRCQ 488
>sp|Q90Y57|JAG1A_BRARE Jagged-1a precursor (Jagged1a) (Jagged1)
Length = 1242
Score = 55.5 bits (132), Expect = 2e-07
Identities = 71/310 (22%), Positives = 106/310 (34%), Gaps = 69/310 (22%)
Frame = +1
Query: 4 TKWAREGLCEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNP 183
T W + LC+K+ N +C Q CLN +T D+ CA
Sbjct: 287 TNWGGQ-LCDKDLN--------TCGTLQP----------CLNGGTCSNTGPDKYHCACPD 327
Query: 184 GYMLVSCKKACNVC----------------GKENKCA--------------------DYR 255
GY +C++A N C G E +CA ++
Sbjct: 328 GYSGQNCERADNACLSEPCLNGGLCVESSLGFECQCAAGWTGPSCNINEDDCSPNPCNHS 387
Query: 256 KRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPS 435
C + C ++ + C C+ S PCV+A+ C + CE P
Sbjct: 388 GVCVDLVDGFKCICPVQWTGKTCLIDANECEES----PCVNAH-SCRNLIGGYFCECLPG 442
Query: 436 WMLYNCKKSCNHCRDARLESISDPNCKDL--QIHCLYWA--------------------N 549
W NC + N C + ++ CKDL C+ A N
Sbjct: 443 WTGQNCDINVNDCHG---QCLNGGLCKDLVNGYRCVCAAGFAGDRCERDVDECASRPCLN 499
Query: 550 AGECQ--LN-------PGWAKQNCPFSCQHC--GGCRDLIQNCQNFANQGYCKTNEVYMN 696
G CQ LN PG++ C +C G C++ Q C + A+ YCK E Y
Sbjct: 500 GGRCQDTLNGFQCLCPPGFSGATCQLDLDYCESGPCQNGAQ-CFSLASDYYCKCPEDYEG 558
Query: 697 QSCKKTCGFC 726
++C + C
Sbjct: 559 KNCSQLKDHC 568
Score = 44.7 bits (104), Expect = 3e-04
Identities = 56/248 (22%), Positives = 89/248 (35%), Gaps = 20/248 (8%)
Frame = +1
Query: 22 GLCEKNFNFMQKNCK--FSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYML 195
GLC+ N + C F+ D C+ D S P CLN DT + +C PG+
Sbjct: 463 GLCKDLVNGYRCVCAAGFAGDRCERDVDECASRP-CLNGGRCQDT-LNGFQCLCPPGFSG 520
Query: 196 VSCKKACNVCGKENKCADYRKRCPIMAKYGLCESDPRFMLQNC---KESCGV--CDGSSK 360
+C+ + C E+ +C +A C+ + +NC K+ C + C
Sbjct: 521 ATCQLDLDYC--ESGPCQNGAQCFSLASDYYCKCPEDYEGKNCSQLKDHCLITPCQVIDS 578
Query: 361 NRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNH----CRDARLESISDPNCKDLQI 528
V +N G P + + H C+D + N D +
Sbjct: 579 CTVAVVSNSTPGGLRLISSSVCGPHGRCRSHSHAGGHFSCDCQDGFTGTYCHENINDCES 638
Query: 529 H-------CLYWANAGECQLNPGWAKQNCPFSCQHC--GGCRDLIQNCQNFANQGYCKTN 681
C+ NA +C GW NC + C CRD C++ N YC+
Sbjct: 639 SPCLSGGTCIDKINAYQCICADGWEGPNCETNIDDCRTNPCRDR-GVCRDLVNDFYCECE 697
Query: 682 EVYMNQSC 705
+ ++C
Sbjct: 698 NGWKGKTC 705
Score = 31.2 bits (69), Expect = 3.2
Identities = 29/161 (18%), Positives = 55/161 (34%)
Frame = +1
Query: 1 CTKWAREGLCEKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASN 180
C + CE + K C C + + N+ +C D +C +
Sbjct: 685 CRDLVNDFYCECENGWKGKTCHSRESQCDE---------DTCNNGGTCSDEGDSFKCLCS 735
Query: 181 PGYMLVSCKKACNVCGKENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSK 360
PG+ +C A N N C + C + C + C ++ C+
Sbjct: 736 PGWEGATCNIAKNSSCLPNPC-ENGATCVVTGDGFTCVCKEGWEGPTCSQNSNDCN---- 790
Query: 361 NRPCVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDA 483
+PC ++ C + CE + +C+ + N C+ +
Sbjct: 791 PQPCYNSG-TCVDGDNWYRCECASGFAGPDCRININECQSS 830
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,329,127
Number of Sequences: 369166
Number of extensions: 2171849
Number of successful extensions: 7201
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6728
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6970118400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)