Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_M21
(881 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8R0Y6|FTHFD_MOUSE 10-formyltetrahydrofolate dehydrogena... 454 e-127
sp|Q5RFM9|FTHFD_PONPY 10-formyltetrahydrofolate dehydrogena... 453 e-127
sp|O75891|FTHFD_HUMAN 10-formyltetrahydrofolate dehydrogena... 451 e-126
sp|P28037|FTHFD_RAT 10-formyltetrahydrofolate dehydrogenase... 450 e-126
sp|P51977|AL1A1_SHEEP Retinal dehydrogenase 1 (RalDH1) (RAL... 294 2e-79
sp|P48644|AL1A1_BOVIN Retinal dehydrogenase 1 (RalDH1) (RAL... 294 2e-79
sp|P13601|AL1A4_RAT Aldehyde dehydrogenase, cytosolic 1 (AL... 292 7e-79
sp|Q9JHW9|AL1A3_MOUSE Aldehyde dehydrogenase 1A3 (Aldehyde ... 292 7e-79
sp|Q8K4D8|AL1A3_RAT Aldehyde dehydrogenase 1A3 (Aldehyde de... 291 1e-78
sp|Q28399|ALDH1_ELEED Aldehyde dehydrogenase, cytosolic 1 (... 290 5e-78
>sp|Q8R0Y6|FTHFD_MOUSE 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (Aldehyde
dehydrogenase 1 family member L1)
Length = 902
Score = 454 bits (1169), Expect = e-127
Identities = 211/293 (72%), Positives = 250/293 (85%)
Frame = +1
Query: 1 LDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQGSVIPISNARPNKNLSITKKEPIGVCG 180
LD+GAVYTLALKTHVGMSI+TFRYFAGWCDKIQG+ IPI+ ARPN+NL++TKKEP+GVCG
Sbjct: 509 LDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCG 568
Query: 181 IITPWNYPLMMLAWKMAACLAAGNTVVMKPAQVTPLTSLKFCEFVVEAGFPPGVINVLPG 360
I+ PWNYPLMML+WK AACLAAGNTVV+KPAQVTPLT+LKF E ++AG P GV+N+LPG
Sbjct: 569 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPG 628
Query: 361 SGAITGTAISEHGDVRKLGFTGSTGIGQTIMTSCAKSNLKKCSLELGGKSPLIIFSDCDI 540
SG++ G +S+H DVRK+GFTGST +G+ IM SCA SN+KK SLELGGKSPLIIF+DCD+
Sbjct: 629 SGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDL 688
Query: 541 EKAVKSACSSVFFNKGENCIAAGRLFIDTRIHDLFLKLIIEEVSKMKIGDPLDRSVDHGP 720
KAV+ SSVFFNKGENCIAAGRLF++ IHD F++ ++EEV KMKIG+PLDR +HGP
Sbjct: 689 NKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDQFVQKVVEEVGKMKIGNPLDRDTNHGP 748
Query: 721 QNHEIHLHKLLEFCNIGEKEGARLVYGGKRCDRKGYFLQPTVFTDVTDDMYIA 879
QNHE HL KL+E+C G KEGA LV GG + R G+F QPTVFTDV D MYIA
Sbjct: 749 QNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIA 801
>sp|Q5RFM9|FTHFD_PONPY 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (Aldehyde
dehydrogenase 1 family member L1)
Length = 902
Score = 453 bits (1165), Expect = e-127
Identities = 211/293 (72%), Positives = 249/293 (84%)
Frame = +1
Query: 1 LDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQGSVIPISNARPNKNLSITKKEPIGVCG 180
LD+GAVYTLALKTHVGMSI+TFRYFAGWCDKIQGS IPI+ ARPN+NL++T+KEP+GVCG
Sbjct: 509 LDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCG 568
Query: 181 IITPWNYPLMMLAWKMAACLAAGNTVVMKPAQVTPLTSLKFCEFVVEAGFPPGVINVLPG 360
II PWNYPLMML+WK AACLAAGNTVV+KPAQVTPLT+LKF E ++AG P GV+NVLPG
Sbjct: 569 IIIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNVLPG 628
Query: 361 SGAITGTAISEHGDVRKLGFTGSTGIGQTIMTSCAKSNLKKCSLELGGKSPLIIFSDCDI 540
SG++ G +S+H DVRK+GFTGST +G+ IM SCA SN+KK SLELGGKSPLIIF+DCD+
Sbjct: 629 SGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGKSPLIIFADCDL 688
Query: 541 EKAVKSACSSVFFNKGENCIAAGRLFIDTRIHDLFLKLIIEEVSKMKIGDPLDRSVDHGP 720
KAV+ SSVFFNKGENCIAAGRLF++ IHD F++ ++EEV KMK+GDPLDR DHGP
Sbjct: 689 NKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGDPLDRDTDHGP 748
Query: 721 QNHEIHLHKLLEFCNIGEKEGARLVYGGKRCDRKGYFLQPTVFTDVTDDMYIA 879
QNH HL KL+E+C G KEGA LV GG + R G+F +PTVFTDV D M+IA
Sbjct: 749 QNHHAHLMKLMEYCQRGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIA 801
>sp|O75891|FTHFD_HUMAN 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (Aldehyde
dehydrogenase 1 family member L1)
Length = 902
Score = 451 bits (1159), Expect = e-126
Identities = 210/293 (71%), Positives = 249/293 (84%)
Frame = +1
Query: 1 LDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQGSVIPISNARPNKNLSITKKEPIGVCG 180
LD+GAVYTLALKTHVGMSI+TFRYFAGWCDKIQGS IPI+ ARPN+NL++T+KEP+GVCG
Sbjct: 509 LDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCG 568
Query: 181 IITPWNYPLMMLAWKMAACLAAGNTVVMKPAQVTPLTSLKFCEFVVEAGFPPGVINVLPG 360
II PWNYPLMML+WK AACLAAGNTVV+KPAQVTPLT+LKF E ++AG P GV+NVLPG
Sbjct: 569 IIIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNVLPG 628
Query: 361 SGAITGTAISEHGDVRKLGFTGSTGIGQTIMTSCAKSNLKKCSLELGGKSPLIIFSDCDI 540
SG++ G +S+H DVRK+GFTGST +G+ IM SCA SN+KK SLELGGKSPLIIF+DCD+
Sbjct: 629 SGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGKSPLIIFADCDL 688
Query: 541 EKAVKSACSSVFFNKGENCIAAGRLFIDTRIHDLFLKLIIEEVSKMKIGDPLDRSVDHGP 720
KAV+ SSVFFNKGENCIAAGRLF++ IHD F++ ++EEV KMK+G+PLDR DHGP
Sbjct: 689 NKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGP 748
Query: 721 QNHEIHLHKLLEFCNIGEKEGARLVYGGKRCDRKGYFLQPTVFTDVTDDMYIA 879
QNH HL KL+E+C G KEGA LV GG + R G+F +PTVFTDV D M+IA
Sbjct: 749 QNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIA 801
>sp|P28037|FTHFD_RAT 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (Aldehyde
dehydrogenase 1 family member L1) (FBP-CI)
Length = 902
Score = 450 bits (1158), Expect = e-126
Identities = 209/293 (71%), Positives = 249/293 (84%)
Frame = +1
Query: 1 LDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQGSVIPISNARPNKNLSITKKEPIGVCG 180
LD GAVYTLALKTHVGMSI+TFRYFAGWCDKIQG+ IPI+ ARPN+NL++TKKEP+GVCG
Sbjct: 509 LDRGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCG 568
Query: 181 IITPWNYPLMMLAWKMAACLAAGNTVVMKPAQVTPLTSLKFCEFVVEAGFPPGVINVLPG 360
I+ PWNYPLMML+WK AACLAAGNTVV+KPAQVTPLT+LKF E ++AG P GV+N+LPG
Sbjct: 569 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPG 628
Query: 361 SGAITGTAISEHGDVRKLGFTGSTGIGQTIMTSCAKSNLKKCSLELGGKSPLIIFSDCDI 540
SG++ G +S+H DVRK+GFTGST +G+ IM SCA SN+KK SLELGGKSPLIIF+DCD+
Sbjct: 629 SGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDL 688
Query: 541 EKAVKSACSSVFFNKGENCIAAGRLFIDTRIHDLFLKLIIEEVSKMKIGDPLDRSVDHGP 720
KAV+ SSVFFNKGENCIAAGRLF++ IH+ F++ ++EEV KMKIG+PL+R +HGP
Sbjct: 689 NKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGP 748
Query: 721 QNHEIHLHKLLEFCNIGEKEGARLVYGGKRCDRKGYFLQPTVFTDVTDDMYIA 879
QNHE HL KL+E+C G KEGA LV GG + R G+F QPTVFTDV D MYIA
Sbjct: 749 QNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIA 801
>sp|P51977|AL1A1_SHEEP Retinal dehydrogenase 1 (RalDH1) (RALDH 1) (Aldehyde dehydrogenase
family 1 member A1) (Aldehyde dehydrogenase, cytosolic)
(ALHDII) (ALDH-E1)
Length = 501
Score = 294 bits (753), Expect = 2e-79
Identities = 144/293 (49%), Positives = 195/293 (66%)
Frame = +1
Query: 1 LDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQGSVIPISNARPNKNLSITKKEPIGVCG 180
++ G +++ A +G I+T RY AGW DKIQG IP+ + T+ EP+GVCG
Sbjct: 109 MNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDG----NFFTYTRSEPVGVCG 164
Query: 181 IITPWNYPLMMLAWKMAACLAAGNTVVMKPAQVTPLTSLKFCEFVVEAGFPPGVINVLPG 360
I PWN+PL+M WK+ L+ GNTVV+KPA+ TPLT+L + EAGFPPGV+N++PG
Sbjct: 165 QIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPG 224
Query: 361 SGAITGTAISEHGDVRKLGFTGSTGIGQTIMTSCAKSNLKKCSLELGGKSPLIIFSDCDI 540
G G AIS H DV K+ FTGST +G+ I + KSNLK+ SLELGGKSP I+F+D D+
Sbjct: 225 YGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADL 284
Query: 541 EKAVKSACSSVFFNKGENCIAAGRLFIDTRIHDLFLKLIIEEVSKMKIGDPLDRSVDHGP 720
+ AV+ A VF+++G+ CIAA RLF++ I+D F++ +E K +G+PL V GP
Sbjct: 285 DNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGP 344
Query: 721 QNHEIHLHKLLEFCNIGEKEGARLVYGGKRCDRKGYFLQPTVFTDVTDDMYIA 879
Q + K+L+ G+KEGA+L GG KGYF+QPTVF+DVTDDM IA
Sbjct: 345 QIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIA 397
>sp|P48644|AL1A1_BOVIN Retinal dehydrogenase 1 (RalDH1) (RALDH 1) (Aldehyde dehydrogenase
family 1 member A1) (Aldehyde dehydrogenase, cytosolic)
(ALHDII) (ALDH-E1)
Length = 501
Score = 294 bits (753), Expect = 2e-79
Identities = 144/293 (49%), Positives = 195/293 (66%)
Frame = +1
Query: 1 LDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQGSVIPISNARPNKNLSITKKEPIGVCG 180
++ G +++ A +G I+T RY AGW DKIQG IP+ + T+ EP+GVCG
Sbjct: 109 MNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDG----NFFTYTRSEPVGVCG 164
Query: 181 IITPWNYPLMMLAWKMAACLAAGNTVVMKPAQVTPLTSLKFCEFVVEAGFPPGVINVLPG 360
I PWN+PL+M WK+ L+ GNTVV+KPA+ TPLT+L + EAGFPPGV+N++PG
Sbjct: 165 QIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPG 224
Query: 361 SGAITGTAISEHGDVRKLGFTGSTGIGQTIMTSCAKSNLKKCSLELGGKSPLIIFSDCDI 540
G G AIS H DV K+ FTGST +G+ I + KSNLK+ SLELGGKSP I+F+D D+
Sbjct: 225 YGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADL 284
Query: 541 EKAVKSACSSVFFNKGENCIAAGRLFIDTRIHDLFLKLIIEEVSKMKIGDPLDRSVDHGP 720
+ AV+ A VF+++G+ CIAA RLF++ I+D F++ +E K +G+PL V GP
Sbjct: 285 DNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGP 344
Query: 721 QNHEIHLHKLLEFCNIGEKEGARLVYGGKRCDRKGYFLQPTVFTDVTDDMYIA 879
Q + K+L+ G+KEGA+L GG KGYF+QPTVF+DVTDDM IA
Sbjct: 345 QIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIA 397
>sp|P13601|AL1A4_RAT Aldehyde dehydrogenase, cytosolic 1 (ALDH class 1) (ALHDII)
(ALDH-E1) (Aldehyde dehydrogenase family 1 member A4)
Length = 501
Score = 292 bits (748), Expect = 7e-79
Identities = 140/293 (47%), Positives = 198/293 (67%)
Frame = +1
Query: 1 LDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQGSVIPISNARPNKNLSITKKEPIGVCG 180
+++G ++T A +SI+ +YFAGW DKI G IP + T++EPIGVCG
Sbjct: 109 MNAGKIFTHAYLLDTEVSIKALKYFAGWADKIHGQTIPSDG----DVFTYTRREPIGVCG 164
Query: 181 IITPWNYPLMMLAWKMAACLAAGNTVVMKPAQVTPLTSLKFCEFVVEAGFPPGVINVLPG 360
I PWN PL++ WK+ A L+ GNTV++KPA+ TPLT+L + EAGFPPGV+NV+PG
Sbjct: 165 QIIPWNGPLILFIWKIGAALSCGNTVIVKPAEQTPLTALYMASLIKEAGFPPGVVNVVPG 224
Query: 361 SGAITGTAISEHGDVRKLGFTGSTGIGQTIMTSCAKSNLKKCSLELGGKSPLIIFSDCDI 540
G+ G AIS H D+ K+ FTGST +G+ I + KSNLK+ +LELGGKSP I+F+D D+
Sbjct: 225 YGSTAGAAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADL 284
Query: 541 EKAVKSACSSVFFNKGENCIAAGRLFIDTRIHDLFLKLIIEEVSKMKIGDPLDRSVDHGP 720
+ AV+ A VFF++G+ C+AA RLF++ I+D F++ +E K +G+PLD + GP
Sbjct: 285 DSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLDSGISQGP 344
Query: 721 QNHEIHLHKLLEFCNIGEKEGARLVYGGKRCDRKGYFLQPTVFTDVTDDMYIA 879
Q + K+L+ G+KEGA+L GG R KG+F+QPTVF++VTD+M IA
Sbjct: 345 QIDKEQHAKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIA 397
>sp|Q9JHW9|AL1A3_MOUSE Aldehyde dehydrogenase 1A3 (Aldehyde dehydrogenase 6)
(Retinaldehyde dehydrogenase 3) (RALDH-3)
Length = 512
Score = 292 bits (748), Expect = 7e-79
Identities = 138/293 (47%), Positives = 195/293 (66%)
Frame = +1
Query: 1 LDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQGSVIPISNARPNKNLSITKKEPIGVCG 180
+D+G + A + I+TFRYFAGW DKIQG IP + + T+ EPIGVCG
Sbjct: 120 MDTGKPFLHAFFVDLEGCIKTFRYFAGWADKIQGRTIPTDD----NVVCFTRHEPIGVCG 175
Query: 181 IITPWNYPLMMLAWKMAACLAAGNTVVMKPAQVTPLTSLKFCEFVVEAGFPPGVINVLPG 360
ITPWN+PL+MLAWK+A L GNTVV+KPA+ TPLT+L + E GFPPGV+N++PG
Sbjct: 176 AITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEVGFPPGVVNIVPG 235
Query: 361 SGAITGTAISEHGDVRKLGFTGSTGIGQTIMTSCAKSNLKKCSLELGGKSPLIIFSDCDI 540
G G AIS H + K+ FTGST +G+ + + ++SNLK+ +LELGGK+P I+ +D D+
Sbjct: 236 FGPTVGAAISSHPQINKIAFTGSTEVGKLVREAASRSNLKRVTLELGGKNPCIVCADADL 295
Query: 541 EKAVKSACSSVFFNKGENCIAAGRLFIDTRIHDLFLKLIIEEVSKMKIGDPLDRSVDHGP 720
+ AV+ A VFFN+G+ C AA R+F++ +++ F++ +E K +GDP D + GP
Sbjct: 296 DLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGP 355
Query: 721 QNHEIHLHKLLEFCNIGEKEGARLVYGGKRCDRKGYFLQPTVFTDVTDDMYIA 879
Q + K+LE G+KEGA+L GG + +G F++PTVF+DVTD+M IA
Sbjct: 356 QIDQKQFDKILELIESGKKEGAKLECGGSAMEDRGLFIKPTVFSDVTDNMRIA 408
>sp|Q8K4D8|AL1A3_RAT Aldehyde dehydrogenase 1A3 (Aldehyde dehydrogenase 6)
(Retinaldehyde dehydrogenase 3) (RALDH-3)
Length = 512
Score = 291 bits (746), Expect = 1e-78
Identities = 137/293 (46%), Positives = 195/293 (66%)
Frame = +1
Query: 1 LDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQGSVIPISNARPNKNLSITKKEPIGVCG 180
+D+G + A + I+TFRYFAGW DKIQG IP + + T+ EPIGVCG
Sbjct: 120 MDTGKPFLHAFFVDLEGCIKTFRYFAGWADKIQGRTIPTDD----NVMCFTRHEPIGVCG 175
Query: 181 IITPWNYPLMMLAWKMAACLAAGNTVVMKPAQVTPLTSLKFCEFVVEAGFPPGVINVLPG 360
ITPWN+PL+MLAWK+A L GNTVV+KPA+ TPLT+L + E GFPPGV+N++PG
Sbjct: 176 AITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEVGFPPGVVNIVPG 235
Query: 361 SGAITGTAISEHGDVRKLGFTGSTGIGQTIMTSCAKSNLKKCSLELGGKSPLIIFSDCDI 540
G G AIS H + K+ FTGST +G+ + + ++SNLK+ +LELGG++P I+ +D D+
Sbjct: 236 FGPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGRNPCIVCADADL 295
Query: 541 EKAVKSACSSVFFNKGENCIAAGRLFIDTRIHDLFLKLIIEEVSKMKIGDPLDRSVDHGP 720
+ AV+ A VFFN+G+ C AA R+F++ +++ F++ +E K +GDP D + GP
Sbjct: 296 DLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGP 355
Query: 721 QNHEIHLHKLLEFCNIGEKEGARLVYGGKRCDRKGYFLQPTVFTDVTDDMYIA 879
Q + K+LE G+KEGA+L GG + +G F++PTVF+DVTD+M IA
Sbjct: 356 QIDQKQFDKILELIESGKKEGAKLECGGSAMEDRGLFIKPTVFSDVTDNMRIA 408
>sp|Q28399|ALDH1_ELEED Aldehyde dehydrogenase, cytosolic 1 (ALDH class 1) (ETA-crystallin)
Length = 501
Score = 290 bits (741), Expect = 5e-78
Identities = 141/293 (48%), Positives = 197/293 (67%)
Frame = +1
Query: 1 LDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQGSVIPISNARPNKNLSITKKEPIGVCG 180
+++G V+ A + I+ RY AGW DKIQG IP+ + S T+ EPIGVCG
Sbjct: 109 INAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRTIPVDG----EFFSYTRHEPIGVCG 164
Query: 181 IITPWNYPLMMLAWKMAACLAAGNTVVMKPAQVTPLTSLKFCEFVVEAGFPPGVINVLPG 360
+I PWN P+++LA K+ L GNTV++KPA+ TPLT+L + EAGFPPGV+N++PG
Sbjct: 165 LIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPG 224
Query: 361 SGAITGTAISEHGDVRKLGFTGSTGIGQTIMTSCAKSNLKKCSLELGGKSPLIIFSDCDI 540
G G AIS H DV K+ FTGST +G+ I + AKSNLK+ +LELG K+P I+F+D D+
Sbjct: 225 YGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADL 284
Query: 541 EKAVKSACSSVFFNKGENCIAAGRLFIDTRIHDLFLKLIIEEVSKMKIGDPLDRSVDHGP 720
+ AV+ A VF N+G++CIAA +LF++ I+D F++ +E K G+PL V+HGP
Sbjct: 285 DSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGVNHGP 344
Query: 721 QNHEIHLHKLLEFCNIGEKEGARLVYGGKRCDRKGYFLQPTVFTDVTDDMYIA 879
Q ++ +K++E G+KEGA+L GG KGYF+QPTVF++VTDDM IA
Sbjct: 345 QINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIA 397
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,050,562
Number of Sequences: 369166
Number of extensions: 2404240
Number of successful extensions: 7094
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6790
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8790245790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)