Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_M09
(566 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 177 2e-44
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 177 2e-44
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 177 2e-44
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 174 2e-43
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 171 1e-42
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 171 1e-42
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 170 2e-42
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 170 3e-42
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 170 3e-42
sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein 169 3e-42
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 177 bits (449), Expect = 2e-44
Identities = 90/162 (55%), Positives = 109/162 (67%)
Frame = +2
Query: 2 ILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLES 181
ILNVSAV+K TGKENKITITNDKGRLSK+DIERMV ++++KNSLES
Sbjct: 485 ILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLES 544
Query: 182 YAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCN 361
YA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCN
Sbjct: 545 YAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCN 604
Query: 362 PIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 487
PI+TK+YQ GPT+EEVD
Sbjct: 605 PIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 177 bits (449), Expect = 2e-44
Identities = 90/162 (55%), Positives = 109/162 (67%)
Frame = +2
Query: 2 ILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLES 181
ILNVSAV+K TGKENKITITNDKGRLSK+DIERMV ++++KNSLES
Sbjct: 485 ILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLES 544
Query: 182 YAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCN 361
YA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCN
Sbjct: 545 YAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCN 604
Query: 362 PIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 487
PI+TK+YQ GPT+EEVD
Sbjct: 605 PIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 177 bits (449), Expect = 2e-44
Identities = 90/162 (55%), Positives = 109/162 (67%)
Frame = +2
Query: 2 ILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLES 181
ILNVSAV+K TGKENKITITNDKGRLSK+DIERMV ++++KNSLES
Sbjct: 485 ILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLES 544
Query: 182 YAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCN 361
YA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCN
Sbjct: 545 YAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCN 604
Query: 362 PIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 487
PI+TK+YQ GPT+EEVD
Sbjct: 605 PIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 174 bits (440), Expect = 2e-43
Identities = 90/165 (54%), Positives = 109/165 (66%), Gaps = 3/165 (1%)
Frame = +2
Query: 2 ILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLES 181
I+NVSAV+K TGKENKITITNDKGRLSK+DIERMV +++AKN LES
Sbjct: 485 IMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLES 544
Query: 182 YAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCN 361
YA+ MK+TVEDEKLK KIS+ D++ I+DKC E IGWLDKNQ A ++EF++ KELEKVCN
Sbjct: 545 YAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCN 604
Query: 362 PIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 487
PI+TK+YQ GPT+EEVD
Sbjct: 605 PIITKLYQSAGGMPGGMPEGMPGGFPGAGAAPGGGSSGPTIEEVD 649
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 171 bits (433), Expect = 1e-42
Identities = 88/167 (52%), Positives = 109/167 (65%), Gaps = 5/167 (2%)
Frame = +2
Query: 2 ILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLES 181
I+NVSA +K TGKENKITITNDKGRLSK+DIERMV ++++KNSLES
Sbjct: 485 IMNVSAADKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLES 544
Query: 182 YAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCN 361
YA+ MK+TVEDEKL+ KIS+ D+ I++KC E IGWLDKNQ A K+E+++H KELEKVCN
Sbjct: 545 YAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCN 604
Query: 362 PIMTKMYQ-----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 487
PI+TK+YQ GPT+EEVD
Sbjct: 605 PIITKLYQGAGGMPGGMPEGMAGGFPGAGGAAPGGGGSSGPTIEEVD 651
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 171 bits (433), Expect = 1e-42
Identities = 89/165 (53%), Positives = 107/165 (64%), Gaps = 3/165 (1%)
Frame = +2
Query: 2 ILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLES 181
I+NVSAV+K TGKENKITITNDKGRLSK+DIERMV +++AKN LES
Sbjct: 485 IMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLES 544
Query: 182 YAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCN 361
YA+ MK+TVEDEKLK KIS+ D+ I+DKC E I WLDKNQ A KDE+++ K+LEKVCN
Sbjct: 545 YAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCN 604
Query: 362 PIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 487
PI+TK+YQ GPT+EEVD
Sbjct: 605 PIITKLYQSDGGMPGGMPDGMPGGFQELGAAPGGGSSGPTIEEVD 649
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 170 bits (431), Expect = 2e-42
Identities = 91/162 (56%), Positives = 105/162 (64%)
Frame = +2
Query: 2 ILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLES 181
ILNVSA +K TGK+NKITITNDKGRLSKD+IERMV RIAAKN+LES
Sbjct: 484 ILNVSAQDKSTGKQNKITITNDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALES 543
Query: 182 YAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCN 361
YA+ MK T+EDEKLKDKISE D+K I +KC E + WLD NQ A KDEF++ KELE VCN
Sbjct: 544 YAFNMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFEHRQKELESVCN 603
Query: 362 PIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 487
PI+TK+YQ GPT+EEVD
Sbjct: 604 PIITKLYQSAGGMPGGMPGGMPGGAPGAGSTG-GGPTIEEVD 644
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 170 bits (430), Expect = 3e-42
Identities = 88/162 (54%), Positives = 106/162 (65%)
Frame = +2
Query: 2 ILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLES 181
ILNV+A +K TGKENKITITNDKGRLSKDDI+RMV R+AAKN+LES
Sbjct: 488 ILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALES 547
Query: 182 YAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCN 361
Y Y +K TVEDEKL+ KISE D+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCN
Sbjct: 548 YTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCN 607
Query: 362 PIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 487
PI++K+YQ GPT+EEVD
Sbjct: 608 PIISKLYQ----------GGPGGGSGGGGSGASGGPTIEEVD 639
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 170 bits (430), Expect = 3e-42
Identities = 89/166 (53%), Positives = 109/166 (65%), Gaps = 4/166 (2%)
Frame = +2
Query: 2 ILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLES 181
ILNVSAV+K TGKENKITITNDKGRLSK+DIERMV ++++KNSL+S
Sbjct: 485 ILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLKS 544
Query: 182 YAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCN 361
YA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCN
Sbjct: 545 YAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCN 604
Query: 362 PIMTKMYQ----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 487
PI+TK+YQ GPT+EEVD
Sbjct: 605 PIITKLYQSAGGMPGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 650
>sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein
Length = 654
Score = 169 bits (429), Expect = 3e-42
Identities = 88/163 (53%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
Frame = +2
Query: 2 ILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLES 181
ILNVSA++K TGKENKITITNDKGRLSK+DIERMV ++ AKNSLES
Sbjct: 492 ILNVSALDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKADDELQRDKVQAKNSLES 551
Query: 182 YAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCN 361
Y Y MK TVEDEK+K KISE D+K I+ KC E + W+DKNQ A KD++++ KELEKVCN
Sbjct: 552 YCYNMKQTVEDEKVKGKISEEDKKTIIKKCNETVEWVDKNQTAEKDQYEHKQKELEKVCN 611
Query: 362 PIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQ-GPTVEEVD 487
PI+TK+YQ GPT+EEVD
Sbjct: 612 PIITKLYQAGGGMPGGMPGGMPGGMPGSGSKASSGGPTIEEVD 654
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,927,726
Number of Sequences: 369166
Number of extensions: 466114
Number of successful extensions: 2069
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1889
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4127973360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)