Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_I13
(847 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 545 e-155
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 545 e-155
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 545 e-155
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 545 e-155
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 545 e-155
sp|P92176|ACT2_LUMTE Actin-2 544 e-154
sp|P12716|ACTC_PISOC Actin, cytoplasmic 544 e-154
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 543 e-154
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 543 e-154
sp|P30163|ACT2_ONCVO Actin-2 543 e-154
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 545 bits (1405), Expect = e-155
Identities = 266/281 (94%), Positives = 276/281 (98%)
Frame = +3
Query: 3 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAP 182
IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 183 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 362
AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLM 191
Query: 363 KILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITI 542
KILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITI
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITI 251
Query: 543 GNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIA 722
GNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIA
Sbjct: 252 GNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIA 311
Query: 723 DRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLST 845
DRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 312 DRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 545 bits (1405), Expect = e-155
Identities = 266/281 (94%), Positives = 277/281 (98%)
Frame = +3
Query: 3 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAP 182
IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 183 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 362
AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLM 191
Query: 363 KILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITI 542
KILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITI
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITI 251
Query: 543 GNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIA 722
GNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIA
Sbjct: 252 GNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIA 311
Query: 723 DRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLST 845
DRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 312 DRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 545 bits (1403), Expect = e-155
Identities = 265/281 (94%), Positives = 276/281 (98%)
Frame = +3
Query: 3 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAP 182
IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 183 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 362
AMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLM 191
Query: 363 KILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITI 542
KILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITI
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITI 251
Query: 543 GNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIA 722
GNERFRCPEA++QPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIA
Sbjct: 252 GNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIA 311
Query: 723 DRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLST 845
DRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 312 DRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 545 bits (1403), Expect = e-155
Identities = 266/281 (94%), Positives = 275/281 (97%)
Frame = +3
Query: 3 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAP 182
IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 183 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 362
AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLM 191
Query: 363 KILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITI 542
KILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA+ SSSLEKSYELPDGQVITI
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDGQVITI 251
Query: 543 GNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIA 722
GNERFRCPEA+FQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIA
Sbjct: 252 GNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIA 311
Query: 723 DRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLST 845
DRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 312 DRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 545 bits (1403), Expect = e-155
Identities = 265/281 (94%), Positives = 276/281 (98%)
Frame = +3
Query: 3 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAP 182
IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 183 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 362
AMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLM 191
Query: 363 KILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITI 542
KILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITI
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITI 251
Query: 543 GNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIA 722
GNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIA
Sbjct: 252 GNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIA 311
Query: 723 DRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLST 845
DRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 312 DRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 544 bits (1402), Expect = e-154
Identities = 267/281 (95%), Positives = 276/281 (98%)
Frame = +3
Query: 3 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAP 182
IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 131
Query: 183 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 362
AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 191
Query: 363 KILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITI 542
KILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TASASSSLEKSYELPDGQVITI
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTASASSSLEKSYELPDGQVITI 251
Query: 543 GNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIA 722
GNERFRCPEA+F SFLG+ESVGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TM+PGIA
Sbjct: 252 GNERFRCPEAMFHASFLGMESVGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIA 311
Query: 723 DRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLST 845
DRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 312 DRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 544 bits (1401), Expect = e-154
Identities = 265/281 (94%), Positives = 276/281 (98%)
Frame = +3
Query: 3 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAP 182
IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 183 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 362
AMYVAIQAVLSLYASGRTTGIV DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 191
Query: 363 KILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITI 542
KILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITI
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITI 251
Query: 543 GNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIA 722
GNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIA
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIA 311
Query: 723 DRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLST 845
DRMQKE++ALAPPTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 312 DRMQKEVTALAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 543 bits (1400), Expect = e-154
Identities = 265/281 (94%), Positives = 275/281 (97%)
Frame = +3
Query: 3 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAP 182
IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 183 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 362
AMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLM 191
Query: 363 KILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITI 542
KILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITI
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITI 251
Query: 543 GNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIA 722
GNERFRCPEA FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIA
Sbjct: 252 GNERFRCPEATFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIA 311
Query: 723 DRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLST 845
DRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 312 DRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 543 bits (1400), Expect = e-154
Identities = 267/281 (95%), Positives = 275/281 (97%)
Frame = +3
Query: 3 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAP 182
IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P
Sbjct: 71 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 130
Query: 183 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 362
AMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 131 AMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 190
Query: 363 KILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITI 542
KILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TAS+SSSLEKSYELPDGQVITI
Sbjct: 191 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATASSSSSLEKSYELPDGQVITI 250
Query: 543 GNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIA 722
GNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMYPGIA
Sbjct: 251 GNERFRCPEALFQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 310
Query: 723 DRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLST 845
DRMQKEI+ALAP TMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 311 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 351
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 543 bits (1400), Expect = e-154
Identities = 266/281 (94%), Positives = 275/281 (97%)
Frame = +3
Query: 3 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAP 182
IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN P
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Query: 183 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 362
AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 191
Query: 363 KILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITI 542
KILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVIT+
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITV 251
Query: 543 GNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIA 722
GNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCD+DIRKDLYAN VLSGGSTMYPGIA
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGSTMYPGIA 311
Query: 723 DRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLST 845
DRMQKEI+ALAP TMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 312 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,697,518
Number of Sequences: 369166
Number of extensions: 1980016
Number of successful extensions: 6500
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6321
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8293644780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)