Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_I09
(816 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp||Q687E1_2 [Segment 2 of 2] Nucleotide pyrophosphatase/ph... 93 8e-19
sp|Q12546|PPA_ASPFI Acid phosphatase precursor (pH 6-optimu... 82 1e-15
sp|Q38924|PPAF_ARATH Iron(III)-zinc(II) purple acid phospha... 77 7e-14
sp|P80366|PPAF_PHAVU Iron(III)-zinc(II) purple acid phospha... 70 5e-12
sp|Q50644|YP77_MYCTU Hypothetical protein Rv2577/MT2654 67 6e-11
sp|Q05205|PPB_LYSEN Alkaline phosphatase precursor (APASE) 42 0.002
sp|P62130|MRE11_HALVO DNA double-strand break repair protei... 39 0.017
sp|P20584|PPA1_ASPNG Phosphate-repressible acid phosphatase... 34 0.42
sp|Q9HRW4|MRE11_HALSA DNA double-strand break repair protei... 34 0.42
sp|Q96VC9|LIP3_YARLI Lipase 3 precursor 32 1.6
>sp||Q687E1_2 [Segment 2 of 2] Nucleotide pyrophosphatase/phosphodiesterase
Length = 350
Score = 93.2 bits (230), Expect = 8e-19
Identities = 86/303 (28%), Positives = 132/303 (43%), Gaps = 34/303 (11%)
Frame = +1
Query: 10 RFCVYGDLG---------YINPQSYS-----RILADVNNGMYDMILHVGDFAYDLDSNFG 147
R V+GD+G + N Q S R++ D++N YD++ H+GD Y + +
Sbjct: 26 RIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIEDLDN--YDIVFHIGDMPYA--NGYL 81
Query: 148 DMGDKFMRLMEPIAARLPYMTSPGNHE----NTGNFSNYKNR-----------FRMPNND 282
D+F + PI+A+ PYM + GNHE NTG F + K+ + P +
Sbjct: 82 SQWDQFTAQVAPISAKKPYMVASGNHERDWPNTGGFFDVKDSGGECGVPAETMYYYPAEN 141
Query: 283 NQNMFYSYNVGPIHFISISTEYYFYVSYGLMPLFNQYKWFVNELKTANLPENRAKQPWII 462
N +Y + G F +E+ + QYK+ L T + R QPW+I
Sbjct: 142 RANFWYKVDYGMFRFCVGDSEHDWREGTP------QYKFIEECLSTVD----RKHQPWLI 191
Query: 463 VLGHRPL-YCTNSDGNDCGIAADWLRYGIPFIHLMG---IEDLLYKYGVDLAIWAHEHTY 630
HR L Y +NS D G F G ++ L +Y VD+A + H H Y
Sbjct: 192 FTAHRVLGYSSNSWYADQG----------SFEEPEGRESLQKLWQRYRVDIAYFGHVHNY 241
Query: 631 ERMWPVYQEKVVNS-STPGQPYLNPKATVHIVSGSAGCQEDHDEFPQIEKDYSAFHSTDY 807
ER P+YQ + VN+ T +N T+ +V+G G + +S F DY
Sbjct: 242 ERTCPLYQSQCVNADKTHYSGTMN--GTIFVVAGGGG--SHLSSYTTAIPKWSIFRDHDY 297
Query: 808 GYS 816
G++
Sbjct: 298 GFT 300
>sp|Q12546|PPA_ASPFI Acid phosphatase precursor (pH 6-optimum acid phosphatase) (APase6)
Length = 614
Score = 82.4 bits (202), Expect = 1e-15
Identities = 76/300 (25%), Positives = 117/300 (39%), Gaps = 83/300 (27%)
Frame = +1
Query: 112 GDFAYDLDSNFGDMGDKFMRLMEPIAARLPYMTSPGNHE--------------------- 228
GD + +SN+ D + + + + ++PYM PGNHE
Sbjct: 276 GDMSVLYESNW----DLWQQWLNNVTLKIPYMVLPGNHEASCAEFDGPHNILTAYLNDDI 331
Query: 229 -----------------NTGNFSNYKNRFRMPNNDNQ---NMFYSYNVGPIHFISISTEY 348
+ NF+ Y++RFRMP + N +YS++ G HF+SI E
Sbjct: 332 ANGTAPTDNLTYYSCPPSQRNFTAYQHRFRMPGPETGGVGNFWYSFDYGLAHFVSIDGET 391
Query: 349 YFYVS----------------------------YGLM-------PLFNQYKWFVNELKTA 423
F S +G + + Q+ W +L
Sbjct: 392 DFANSPEWNFAEDVTGNETLPSESETFITDSGPFGNVNGSVHETKSYEQWHWLQQDLAKV 451
Query: 424 NLPENRAKQPWIIVLGHRPLYCTNSDGNDCGIAADWLRYGIPFIHLM-GIEDLLYKYGVD 600
+ R+K PW+IV+ HRP+Y + Y +H+ E LL KYGVD
Sbjct: 452 D----RSKTPWVIVMSHRPMYSS--------------AYSSYQLHVREAFEGLLLKYGVD 493
Query: 601 LAIWAHEHTYERMWP------VYQEKVVNSSTPGQPYLNPKATVHIVSGSAGCQEDHDEF 762
+ H H YER++P + +VN++T N K+ HI++G AG E H EF
Sbjct: 494 AYLSGHIHWYERLYPLGANGTIDTAAIVNNNT--YYAHNGKSITHIINGMAGNIESHSEF 551
>sp|Q38924|PPAF_ARATH Iron(III)-zinc(II) purple acid phosphatase precursor (PAP)
Length = 469
Score = 76.6 bits (187), Expect = 7e-14
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 16/283 (5%)
Frame = +1
Query: 13 FCVYGDLGYINPQSYSRILADVNNGMYDMILHVGDFAYD--LDSNFGDMGDKFMRLMEPI 186
F + GDLG + + ++N G +L VGD +Y ++ + D + R +E
Sbjct: 163 FGLIGDLGQTYDSNSTLSHYEMNPGKGQAVLFVGDLSYADRYPNHDNNRWDTWGRFVERS 222
Query: 187 AARLPYMTSPGNHE--------NTGNFSNYKNRFRMPNNDNQN---MFYSYNVGPIHFIS 333
A P++ + GNHE F + NR+ P+ + + ++YS + I
Sbjct: 223 VAYQPWIWTAGNHEIDFVPDIGEIEPFKPFMNRYHTPHKASGSISPLWYSIKRASAYIIV 282
Query: 334 ISTEYYFYVSYGLMPLFNQYKWFVNELKTANLPENRAKQPWIIVLGHRPLYCTNSDGNDC 513
+S Y SYG+ QYKW EL+ N R + PW+IVL H P Y S
Sbjct: 283 MSC----YSSYGIYT--PQYKWLEKELQGVN----RTETPWLIVLVHSPFY---SSYVHH 329
Query: 514 GIAADWLRYGIPFIHLMGIEDLLYKYGVDLAIWAHEHTYERMWPV--YQEKVVNSSTPGQ 687
+ + LR + E KY VD+ H H YER V +VN +
Sbjct: 330 YMEGETLR--------VMYEQWFVKYKVDVVFAGHVHAYERSERVSNIAYNIVNGLC--E 379
Query: 688 PYLNPKATVHIVSGSAGCQED-HDEFPQIEKDYSAFHSTDYGY 813
P + A ++I G G E + Q + YSAF +G+
Sbjct: 380 PISDESAPIYITIGDGGNSEGLLTDMMQPQPKYSAFREASFGH 422
>sp|P80366|PPAF_PHAVU Iron(III)-zinc(II) purple acid phosphatase (PAP)
Length = 432
Score = 70.5 bits (171), Expect = 5e-12
Identities = 77/283 (27%), Positives = 118/283 (41%), Gaps = 16/283 (5%)
Frame = +1
Query: 13 FCVYGDLGYINPQSYSRILADVNNGMYDMILHVGDFAY-DLDSNFGDMG-DKFMRLMEPI 186
F + GDLG + + +++ +L VGD +Y D N ++ D + R E
Sbjct: 130 FGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERS 189
Query: 187 AARLPYMTSPGNHE--------NTGNFSNYKNRFRMPNNDNQN---MFYSYNVGPIHFIS 333
A P++ + GNHE T F + R+ +P +Q+ +YS H I
Sbjct: 190 VAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIV 249
Query: 334 ISTEYYFYVSYGLMPLFNQYKWFVNELKTANLPENRAKQPWIIVLGHRPLYCTNSDGNDC 513
+S+ +++YG QY W EL+ R++ PW+IVL H PLY + N
Sbjct: 250 LSS----HIAYGRGT--PQYTWLKKELRKVK----RSETPWLIVLMHSPLY---NSYNHH 296
Query: 514 GIAADWLRYGIPFIHLMGIEDLLYKYGVDLAIWAHEHTYERMWPVYQEKVVNSSTPG--Q 687
+ + +R E KY VD+ H H YER V + T G
Sbjct: 297 FMEGEAMR--------TKFEAWFVKYKVDVVFAGHVHAYERSERV--SNIAYKITDGLCT 346
Query: 688 PYLNPKATVHIVSGSAGCQEDHD-EFPQIEKDYSAFHSTDYGY 813
P + A V+I G AG D Q + +YSAF +G+
Sbjct: 347 PVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGH 389
>sp|Q50644|YP77_MYCTU Hypothetical protein Rv2577/MT2654
Length = 529
Score = 67.0 bits (162), Expect = 6e-11
Identities = 58/214 (27%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Frame = +1
Query: 199 PYMTSPGNHEN-TGN----FSNYKNRFRMPNNDN----QNMFYSYNVGPIHFISISTEYY 351
P+M + GNHEN GN + Y+ F +P++ + + ++YS+ G + IS+ +
Sbjct: 246 PWMPAAGNHENEVGNGPIGYDAYQTYFAVPDSGSSPQLRGLWYSFTAGSVRVISLHNDDV 305
Query: 352 FYVSYGLMPLFN-----QYKWFVNELKTANLPENRAKQPWIIVLGHRPLYCTNSDGN--D 510
Y G + Q +W EL A ++ W++V H+ T D N D
Sbjct: 306 CYQDGGNSYVRGYSGGEQRRWLQAELANAR---RDSEIDWVVVCMHQTAISTADDNNGAD 362
Query: 511 CGIAADWLRYGIPFIHLMGIEDLLYKYGVDLAIWAHEHTYERMWPVYQEKVVNSSTP--- 681
GI +WL L +Y VDL + HEH YER P+ ++ TP
Sbjct: 363 LGIRQEWL-------------PLFDQYQVDLVVCGHEHHYERSHPLRGALGTDTRTPIPV 409
Query: 682 ---GQPYLNPKATVHIVSGSAGCQEDHDE--FPQ 768
+ + TVH+V G G + + FPQ
Sbjct: 410 DTRSDLIDSTRGTVHLVIGGGGTSKPTNALLFPQ 443
>sp|Q05205|PPB_LYSEN Alkaline phosphatase precursor (APASE)
Length = 539
Score = 42.4 bits (98), Expect = 0.002
Identities = 50/204 (24%), Positives = 74/204 (36%), Gaps = 13/204 (6%)
Frame = +1
Query: 100 ILHVGDFAY------DLDSNFGDMGDKFMRLMEPIAARLPYMTSPGNHE--NTG-----N 240
+ GD AY + +S + +F L P SPGNH+ TG +
Sbjct: 182 VFTAGDNAYNSGTLSEYNSRYAPTWGRFKALTSP---------SPGNHDYSTTGAKGYFD 232
Query: 241 FSNYKNRFRMPNNDNQNMFYSYNVGPIHFISISTEYYFYVSYGLMPLFNQYKWFVNELKT 420
+ N P D +YS++VG HF+S++T +S G + Q W +L
Sbjct: 233 YFNGSGNQTGPAGDRSKGYYSWDVGDWHFVSLNT-----MSGGTVAQ-AQIDWLKADL-A 285
Query: 421 ANLPENRAKQPWIIVLGHRPLYCTNSDGNDCGIAADWLRYGIPFIHLMGIEDLLYKYGVD 600
AN +P H PL S + W D LY D
Sbjct: 286 AN------TKPCTAAYFHHPLLSRGSYSGYSQVKPFW--------------DALYAAKAD 325
Query: 601 LAIWAHEHTYERMWPVYQEKVVNS 672
L + H+H Y+R + +K S
Sbjct: 326 LVLVGHDHNYQRYGKMNPDKAAAS 349
>sp|P62130|MRE11_HALVO DNA double-strand break repair protein mre11
Length = 441
Score = 38.9 bits (89), Expect = 0.017
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 52 SYSRILADVNNGMYDMILHVGDFAYDLDSNFGDMGDKFMRLMEPIAARLPYMTSPGNHEN 231
++ R++AD +G D ++H GD +D D+ L A +P++ GNHE+
Sbjct: 29 AFERVVADALDGDVDAVVHAGDLYHDRRPELPDLLGTLAALRRLDDAGIPFLAIVGNHES 88
Query: 232 T 234
T
Sbjct: 89 T 89
>sp|P20584|PPA1_ASPNG Phosphate-repressible acid phosphatase precursor (Acid phosphatase
PII)
Length = 436
Score = 34.3 bits (77), Expect = 0.42
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +1
Query: 238 NFSNYKNRFRMPNNDNQ---NMFYSYNVGPIHFISISTEYYF 354
NF+ Y++ FRMP + N +YS++ G HF+SI E F
Sbjct: 227 NFTAYQHPFRMPGPETGGVGNFWYSFDYGLAHFVSIDGETDF 268
>sp|Q9HRW4|MRE11_HALSA DNA double-strand break repair protein mre11
Length = 387
Score = 34.3 bits (77), Expect = 0.42
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +1
Query: 52 SYSRILADVNNGMYDMILHVGDFAYDLDSNFGDMGDKFMRLMEPIAARLPYMTSPGNHEN 231
++ ++ D + D ++H GD +D D+ D L A +P++ GNHE
Sbjct: 29 AFDAVITDAIDEGVDAVVHAGDLYHDRQPGLRDILDTIALLRPLQDADIPFLAVVGNHEG 88
Query: 232 T 234
T
Sbjct: 89 T 89
>sp|Q96VC9|LIP3_YARLI Lipase 3 precursor
Length = 498
Score = 32.3 bits (72), Expect = 1.6
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 106 HVGDFAYDLDSN-FGDMGDKFMRLMEPIAARLPYMTSPGNHENTGNFSN 249
H D Y +S F + GDK RL + RL Y P +H N G + N
Sbjct: 409 HAVDVLYMFNSTKFNEHGDKLSRLFQSHFLRLAYGLEPWDHRNFGVYRN 457
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,002,112
Number of Sequences: 369166
Number of extensions: 2171238
Number of successful extensions: 5872
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5819
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7811456130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)