Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_I03
(337 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P91685|MGR_DROME Metabotropic glutamate receptor precursor 39 0.005
sp|O15303|MGR6_HUMAN Metabotropic glutamate receptor 6 prec... 38 0.008
sp|P35400|MGR7_RAT Metabotropic glutamate receptor 7 precur... 38 0.008
sp|Q68ED2|MGR7_MOUSE Metabotropic glutamate receptor 7 prec... 38 0.008
sp|Q14831|MGR7_HUMAN Metabotropic glutamate receptor 7 prec... 38 0.008
sp|Q5RDQ8|MGR7_PONPY Metabotropic glutamate receptor 7 prec... 38 0.008
sp|Q863I4|MGR6_RABIT Metabotropic glutamate receptor 6 prec... 38 0.008
sp|P35349|MGR6_RAT Metabotropic glutamate receptor 6 precur... 37 0.014
sp|Q5NCH9|MGR6_MOUSE Metabotropic glutamate receptor 6 prec... 37 0.014
sp|O00222|MGR8_HUMAN Metabotropic glutamate receptor 8 prec... 36 0.024
>sp|P91685|MGR_DROME Metabotropic glutamate receptor precursor
Length = 976
Score = 38.5 bits (88), Expect = 0.005
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +2
Query: 35 WIATDSWGGRNWVNMRNSTTILNNTIAVVPKTFFDDDFKEYYINRLPSEIDCDPWLAEQF 214
WIA+D WG + + + I I V ++ DF Y + P +PW AE +
Sbjct: 306 WIASDGWGKQQKL-LEGLEDIAEGAITVELQSEIIADFDRYMMQLTPETNQRNPWFAEYW 364
Query: 215 ENLCNCQYNNRSL 253
E+ NC + S+
Sbjct: 365 EDTFNCVLTSLSV 377
>sp|O15303|MGR6_HUMAN Metabotropic glutamate receptor 6 precursor (mGluR6)
Length = 877
Score = 37.7 bits (86), Expect = 0.008
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 32 LWIATDSWGGRNWVNMRNSTTILNNTIAVVPKTFFDDDFKEYYINRLPSEIDCDPWLAEQ 211
LW+ +DSWG + + + + I ++PK D F +Y++ R + W AE
Sbjct: 302 LWVGSDSWGAKT-SPILSLEDVAVGAITILPKRASIDGFDQYFMTRSLENNRRNIWFAEF 360
Query: 212 FENLCNCQ 235
+E NC+
Sbjct: 361 WEENFNCK 368
>sp|P35400|MGR7_RAT Metabotropic glutamate receptor 7 precursor (mGluR7)
Length = 915
Score = 37.7 bits (86), Expect = 0.008
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 32 LWIATDSWGGRNWVN-MRNSTTILNNTIAVVPKTFFDDDFKEYYINRLPSEIDCDPWLAE 208
LW+ +DSWG + +N + I I + PK + F Y+ +R + W AE
Sbjct: 309 LWVGSDSWGSK--INPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAE 366
Query: 209 QFENLCNCQ 235
+E NC+
Sbjct: 367 YWEENFNCK 375
>sp|Q68ED2|MGR7_MOUSE Metabotropic glutamate receptor 7 precursor (mGluR7)
Length = 915
Score = 37.7 bits (86), Expect = 0.008
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 32 LWIATDSWGGRNWVN-MRNSTTILNNTIAVVPKTFFDDDFKEYYINRLPSEIDCDPWLAE 208
LW+ +DSWG + +N + I I + PK + F Y+ +R + W AE
Sbjct: 309 LWVGSDSWGSK--INPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAE 366
Query: 209 QFENLCNCQ 235
+E NC+
Sbjct: 367 YWEENFNCK 375
>sp|Q14831|MGR7_HUMAN Metabotropic glutamate receptor 7 precursor (mGluR7)
Length = 915
Score = 37.7 bits (86), Expect = 0.008
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 32 LWIATDSWGGRNWVN-MRNSTTILNNTIAVVPKTFFDDDFKEYYINRLPSEIDCDPWLAE 208
LW+ +DSWG + +N + I I + PK + F Y+ +R + W AE
Sbjct: 309 LWVGSDSWGSK--INPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAE 366
Query: 209 QFENLCNCQ 235
+E NC+
Sbjct: 367 YWEENFNCK 375
>sp|Q5RDQ8|MGR7_PONPY Metabotropic glutamate receptor 7 precursor (mGluR7)
Length = 922
Score = 37.7 bits (86), Expect = 0.008
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 32 LWIATDSWGGRNWVN-MRNSTTILNNTIAVVPKTFFDDDFKEYYINRLPSEIDCDPWLAE 208
LW+ +DSWG + +N + I I + PK + F Y+ +R + W AE
Sbjct: 309 LWVGSDSWGSK--INPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNVWFAE 366
Query: 209 QFENLCNCQ 235
+E NC+
Sbjct: 367 YWEENFNCK 375
>sp|Q863I4|MGR6_RABIT Metabotropic glutamate receptor 6 precursor (mGluR6)
Length = 868
Score = 37.7 bits (86), Expect = 0.008
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 32 LWIATDSWGGRNWVNMRNSTTILNNTIAVVPKTFFDDDFKEYYINRLPSEIDCDPWLAEQ 211
LW+ +DSWG + + + + I ++PK D F +Y++ R + W AE
Sbjct: 293 LWVGSDSWGSKT-SPVLSLEDVAVGAITILPKRASIDGFDQYFMTRSLENNRRNIWFAEF 351
Query: 212 FENLCNCQ 235
+E NC+
Sbjct: 352 WEENFNCK 359
>sp|P35349|MGR6_RAT Metabotropic glutamate receptor 6 precursor (mGluR6)
Length = 871
Score = 37.0 bits (84), Expect = 0.014
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +2
Query: 32 LWIATDSWGGRNWVNMRNSTTILN------NTIAVVPKTFFDDDFKEYYINRLPSEIDCD 193
LW+ +DSWG + + ILN I ++PK D F +Y++ R +
Sbjct: 296 LWVGSDSWGSK-------ISPILNLEEEAVGAITILPKRASIDGFDQYFMTRSLENNRRN 348
Query: 194 PWLAEQFENLCNCQ 235
W AE +E NC+
Sbjct: 349 IWFAEFWEENFNCK 362
>sp|Q5NCH9|MGR6_MOUSE Metabotropic glutamate receptor 6 precursor (mGluR6)
Length = 871
Score = 37.0 bits (84), Expect = 0.014
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +2
Query: 32 LWIATDSWGGRNWVNMRNSTTILN------NTIAVVPKTFFDDDFKEYYINRLPSEIDCD 193
LW+ +DSWG + + ILN I ++PK D F +Y++ R +
Sbjct: 296 LWVGSDSWGSK-------ISPILNLEEEAVGAITILPKRASIDGFDQYFMTRSLENNRRN 348
Query: 194 PWLAEQFENLCNCQ 235
W AE +E NC+
Sbjct: 349 IWFAEFWEENFNCK 362
>sp|O00222|MGR8_HUMAN Metabotropic glutamate receptor 8 precursor (mGluR8)
Length = 908
Score = 36.2 bits (82), Expect = 0.024
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 32 LWIATDSWGGRNWVNMRNSTTILNNTIAVVPKTFFDDDFKEYYINRLPSEIDCDPWLAEQ 211
LWI +DSWG + + I + ++PK D F Y+ +R + + W AE
Sbjct: 304 LWIGSDSWGSKI-APVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFAEF 362
Query: 212 FENLCNCQ 235
+E C+
Sbjct: 363 WEENFGCK 370
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,763,496
Number of Sequences: 369166
Number of extensions: 681801
Number of successful extensions: 1630
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 68,354,980
effective HSP length: 79
effective length of database: 53,760,915
effective search space used: 1720349280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)