Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_F24
(825 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenas... 338 1e-92
sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase ... 338 1e-92
sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenas... 337 3e-92
sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenas... 336 4e-92
sp|P04406|G3P2_HUMAN Glyceraldehyde-3-phosphate dehydrogena... 334 2e-91
sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenas... 333 3e-91
sp|P10096|G3P_BOVIN Glyceraldehyde-3-phosphate dehydrogenas... 332 8e-91
sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenas... 331 2e-90
sp|P16858|G3P_MOUSE Glyceraldehyde-3-phosphate dehydrogenas... 330 4e-90
sp|O57479|G3P_COLLI Glyceraldehyde-3-phosphate dehydrogenas... 329 6e-90
>sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 338 bits (866), Expect = 1e-92
Identities = 169/251 (67%), Positives = 196/251 (78%), Gaps = 4/251 (1%)
Frame = +1
Query: 25 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 204
KVG+NGFGRIGRLV RAA G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 62
Query: 205 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 384
GKLV++G ++S++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGKSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 385 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 564
PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 181
Query: 565 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGNGF----PCSSSR 732
TQKTVDGPS K+WRDGRGAAQNIIP IPELNGK+TG F P S
Sbjct: 182 TQKTVDGPSGKMWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 733 CICCRFDLQTK 765
+ CR + K
Sbjct: 242 DLTCRLEKAAK 252
Score = 63.9 bits (154), Expect = 5e-10
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +2
Query: 704 GMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASE 817
GMAFRVP P+VSVVDLTC+L+KAAKYD+IK +K ASE
Sbjct: 228 GMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASE 265
>sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 338 bits (866), Expect = 1e-92
Identities = 170/251 (67%), Positives = 195/251 (77%), Gaps = 4/251 (1%)
Frame = +1
Query: 25 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 204
KVG+NGFGRIGRLV RAA G VD+VA+NDPFI+L YMVYMF+YDSTHGKFHG V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAEN 62
Query: 205 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 384
GKLV++G A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGKAITIFQERDPANIKWGDAGATYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 385 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 564
PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 181
Query: 565 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGNGF----PCSSSR 732
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TG F P S
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 733 CICCRFDLQTK 765
+ CR + K
Sbjct: 242 DLTCRLEKPAK 252
Score = 62.0 bits (149), Expect = 2e-09
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +2
Query: 704 GMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASE 817
GMAFRVP P+VSVVDLTC+L+K AKYD+IK +K ASE
Sbjct: 228 GMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVVKQASE 265
>sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 337 bits (863), Expect = 3e-92
Identities = 169/251 (67%), Positives = 195/251 (77%), Gaps = 4/251 (1%)
Frame = +1
Query: 25 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 204
KVG+NGFGRIGRLV RAA G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 62
Query: 205 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 384
GKLV++G ++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGKPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 385 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 564
PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 181
Query: 565 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGNGF----PCSSSR 732
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TG F P S
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 733 CICCRFDLQTK 765
+ CR + K
Sbjct: 242 DLTCRLEKAAK 252
Score = 63.9 bits (154), Expect = 5e-10
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +2
Query: 704 GMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASE 817
GMAFRVP P+VSVVDLTC+L+KAAKYD+IK +K ASE
Sbjct: 228 GMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASE 265
>sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 336 bits (862), Expect = 4e-92
Identities = 170/251 (67%), Positives = 194/251 (77%), Gaps = 4/251 (1%)
Frame = +1
Query: 25 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 204
KVG+NGFGRIGRLV RAA G VDVVA+NDPFI+L YMVYMF+YDSTHGKFHG V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAEN 62
Query: 205 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 384
GKLV++G A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 385 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 564
PS DAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 122 PSXDAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 181
Query: 565 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGNGF----PCSSSR 732
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TG F P S
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 733 CICCRFDLQTK 765
+ CR + K
Sbjct: 242 DLTCRLEKAAK 252
Score = 63.9 bits (154), Expect = 5e-10
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +2
Query: 704 GMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASE 817
GMAFRVP P+VSVVDLTC+L+KAAKYD+IK +K ASE
Sbjct: 228 GMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASE 265
>sp|P04406|G3P2_HUMAN Glyceraldehyde-3-phosphate dehydrogenase, liver (GAPDH)
Length = 335
Score = 334 bits (856), Expect = 2e-91
Identities = 165/255 (64%), Positives = 198/255 (77%), Gaps = 4/255 (1%)
Frame = +1
Query: 13 MTKPKVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHV 192
M K KVG+NGFGRIGRLV RAA G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V
Sbjct: 1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTV 60
Query: 193 EAKDGKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKV 372
+A++GKLV++G+ ++++ +R+P +I W YVVESTGVFTT+EKA AH + AK+V
Sbjct: 61 KAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGG-AKRV 119
Query: 373 VISAPSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIH 552
+ISAPSADAPMFVMGVNHEKYD SL I+SNASCTTNCLAPLAKV++D+FGI EGLMTT+H
Sbjct: 120 IISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVH 179
Query: 553 AYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGNGFPCSSSR 732
A TATQKTVDGPS KLWRDGRGA QNIIP IPELNGK+TG F ++
Sbjct: 180 AITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTAN 239
Query: 733 C----ICCRFDLQTK 765
+ CR + K
Sbjct: 240 VSVVDLTCRLEKPAK 254
Score = 58.9 bits (141), Expect = 2e-08
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +2
Query: 704 GMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASE 817
GMAFRVP +VSVVDLTC+L+K AKYD+IK +K ASE
Sbjct: 230 GMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASE 267
>sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 333 bits (854), Expect = 3e-91
Identities = 169/251 (67%), Positives = 195/251 (77%), Gaps = 4/251 (1%)
Frame = +1
Query: 25 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 204
KVG+NGFGRIGRLV RAA+ G V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKAEN 62
Query: 205 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 384
GKLV++GHA++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGHAITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 385 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 564
PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITA 181
Query: 565 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGNGF----PCSSSR 732
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TG F P S
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 733 CICCRFDLQTK 765
+ CR + K
Sbjct: 242 DLTCRLEKPAK 252
Score = 58.9 bits (141), Expect = 2e-08
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 704 GMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASE 817
GMAFRVP P+VSVVDLTC+L+K AKYD+IK +K A++
Sbjct: 228 GMAFRVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAAD 265
>sp|P10096|G3P_BOVIN Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 320
Score = 332 bits (851), Expect = 8e-91
Identities = 167/251 (66%), Positives = 195/251 (77%), Gaps = 4/251 (1%)
Frame = +1
Query: 25 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 204
KVG+NGFGRIGRLV RAA G VD+VA+NDPFI+L YMVYMF+YDSTHGKF+G V+A++
Sbjct: 2 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFNGTVKAEN 61
Query: 205 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 384
GKLV++G A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 62 GKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 120
Query: 385 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 564
PSADAPMFVMGVNHEKY+ +L IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 121 PSADAPMFVMGVNHEKYNNTLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 180
Query: 565 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGNGF----PCSSSR 732
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TG F P S
Sbjct: 181 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 240
Query: 733 CICCRFDLQTK 765
+ CR + K
Sbjct: 241 DLTCRLEKPAK 251
Score = 63.2 bits (152), Expect = 9e-10
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +2
Query: 704 GMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASE 817
GMAFRVP P+VSVVDLTC+L+K AKYDEIK +K ASE
Sbjct: 227 GMAFRVPTPNVSVVDLTCRLEKPAKYDEIKKVVKQASE 264
>sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 331 bits (848), Expect = 2e-90
Identities = 168/251 (66%), Positives = 195/251 (77%), Gaps = 4/251 (1%)
Frame = +1
Query: 25 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 204
KVG+NGFGRIGRLV RAA+ G V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKAEN 62
Query: 205 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 384
GKLV++G+A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGNAITIFQERDPSNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 385 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 564
PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITA 181
Query: 565 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGNGF----PCSSSR 732
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TG F P S
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 733 CICCRFDLQTK 765
+ CR + K
Sbjct: 242 DLTCRLEKPAK 252
Score = 60.1 bits (144), Expect = 7e-09
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +2
Query: 704 GMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASE 817
GMAFRVP P+VSVVDLTC+L+K AKYD+IK +K A+E
Sbjct: 228 GMAFRVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAAE 265
>sp|P16858|G3P_MOUSE Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 330 bits (845), Expect = 4e-90
Identities = 166/251 (66%), Positives = 196/251 (78%), Gaps = 4/251 (1%)
Frame = +1
Query: 25 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 204
KVG+NGFGRIGRLV RAA+ G V++VA+NDPFI+L+YMVYMF+YDSTHGKF+G V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAICSGKVEIVAINDPFIDLNYMVYMFQYDSTHGKFNGTVKAEN 62
Query: 205 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 384
GKLV++G ++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGKPITIFQERDPTNIKWGEAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 385 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 564
PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITA 181
Query: 565 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGNGF----PCSSSR 732
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TG F P S
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 733 CICCRFDLQTK 765
+ CR + K
Sbjct: 242 DLTCRLEKPAK 252
Score = 62.0 bits (149), Expect = 2e-09
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +2
Query: 704 GMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASE 817
GMAFRVP P+VSVVDLTC+L+K AKYD+IK +K ASE
Sbjct: 228 GMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVVKQASE 265
>sp|O57479|G3P_COLLI Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 329 bits (843), Expect = 6e-90
Identities = 167/251 (66%), Positives = 194/251 (77%), Gaps = 4/251 (1%)
Frame = +1
Query: 25 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 204
KVG+NGFGRIGRLV RAA+ V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAILSAKVQVVAINDPFIDLNYMVYMFKYDSTHGHFRGTVKAEN 62
Query: 205 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 384
GKLV++G+A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGNAITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 385 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 564
PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITA 181
Query: 565 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGNGF----PCSSSR 732
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TG F P S
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 733 CICCRFDLQTK 765
+ CR + K
Sbjct: 242 DLTCRLEKPAK 252
Score = 58.9 bits (141), Expect = 2e-08
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +2
Query: 704 GMAFRVPVPDVSVVDLTCKLKKAAKYDEIKAAIKHASE 817
GMAFRVP P+VSVVDLTC+L+K AKYD+IK +K A++
Sbjct: 228 GMAFRVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAAD 265
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,634,671
Number of Sequences: 369166
Number of extensions: 1995837
Number of successful extensions: 6055
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5608
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7956112725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)