Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_E10
(220 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 52 3e-07
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 52 3e-07
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 52 3e-07
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 48 6e-06
sp|Q9I8F9|HSP71_ORYLA Heat shock 70 kDa protein 1 (HSP70-1) 48 6e-06
sp|P17804|HSP70_LEIDO Heat shock 70 kDa protein 47 2e-05
sp|P34931|HS70L_HUMAN Heat shock 70 kDa protein 1L (Heat sh... 47 2e-05
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 47 2e-05
sp|Q07437|HSP70_LEIAM Heat shock 70 kDa protein 47 2e-05
sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein 47 2e-05
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 52.4 bits (124), Expect = 3e-07
Identities = 26/62 (41%), Positives = 32/62 (51%)
Frame = +1
Query: 1 QQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEE 180
Q A K+EF++ KELEKVCNPI+TK+YQ GPT+EE
Sbjct: 585 QTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEE 644
Query: 181 VD 186
VD
Sbjct: 645 VD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 52.4 bits (124), Expect = 3e-07
Identities = 26/62 (41%), Positives = 32/62 (51%)
Frame = +1
Query: 1 QQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEE 180
Q A K+EF++ KELEKVCNPI+TK+YQ GPT+EE
Sbjct: 585 QTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEE 644
Query: 181 VD 186
VD
Sbjct: 645 VD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 52.4 bits (124), Expect = 3e-07
Identities = 26/62 (41%), Positives = 32/62 (51%)
Frame = +1
Query: 1 QQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEE 180
Q A K+EF++ KELEKVCNPI+TK+YQ GPT+EE
Sbjct: 585 QTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEE 644
Query: 181 VD 186
VD
Sbjct: 645 VD 646
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 48.1 bits (113), Expect = 6e-06
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +1
Query: 1 QQAAKDEFDYHYKELEKVCNPIMTKMYQ-----XXXXXXXXXXXXXXXXXXXXXXXXKQG 165
Q A K+E+++H KELEKVCNPI+TK+YQ G
Sbjct: 585 QTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPGGMPEGMAGGFPGAGGAAPGGGGSSG 644
Query: 166 PTVEEVD 186
PT+EEVD
Sbjct: 645 PTIEEVD 651
>sp|Q9I8F9|HSP71_ORYLA Heat shock 70 kDa protein 1 (HSP70-1)
Length = 639
Score = 48.1 bits (113), Expect = 6e-06
Identities = 27/62 (43%), Positives = 32/62 (51%)
Frame = +1
Query: 1 QQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEE 180
Q A KDEF + KELEKVCNPI++K+YQ QGPT+EE
Sbjct: 587 QLADKDEFQHKQKELEKVCNPIISKLYQ---------GGMPSGSCREQARADSQGPTIEE 637
Query: 181 VD 186
VD
Sbjct: 638 VD 639
>sp|P17804|HSP70_LEIDO Heat shock 70 kDa protein
Length = 653
Score = 46.6 bits (109), Expect = 2e-05
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +1
Query: 1 QQAAKDEFDYHYKELEKVCNPIMTKMYQ 84
Q+A K+E+++ KELE VCNPIMTKMYQ
Sbjct: 587 QEATKEEYEHKQKELESVCNPIMTKMYQ 614
>sp|P34931|HS70L_HUMAN Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein 1-like)
(Heat shock 70 kDa protein 1-Hom) (HSP70-Hom)
Length = 641
Score = 46.6 bits (109), Expect = 2e-05
Identities = 26/62 (41%), Positives = 32/62 (51%)
Frame = +1
Query: 1 QQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEE 180
Q A KDEFD+ KELE++CNPI+TK+YQ GPT+EE
Sbjct: 587 QLAEKDEFDHKRKELEQMCNPIITKLYQ-------GGCTGPACGTGYVPGRPATGPTIEE 639
Query: 181 VD 186
VD
Sbjct: 640 VD 641
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 46.6 bits (109), Expect = 2e-05
Identities = 26/62 (41%), Positives = 31/62 (50%)
Frame = +1
Query: 1 QQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEE 180
Q A KDEF++ KELE VCNPI+TK+YQ GPT+EE
Sbjct: 584 QTAEKDEFEHRQKELESVCNPIITKLYQSAGGMPGGMPGGMPGGAPGAGSTG-GGPTIEE 642
Query: 181 VD 186
VD
Sbjct: 643 VD 644
>sp|Q07437|HSP70_LEIAM Heat shock 70 kDa protein
Length = 652
Score = 46.6 bits (109), Expect = 2e-05
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +1
Query: 1 QQAAKDEFDYHYKELEKVCNPIMTKMYQ 84
Q+A K+E+++ KELE VCNPIMTKMYQ
Sbjct: 588 QEATKEEYEHKQKELENVCNPIMTKMYQ 615
>sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein
Length = 654
Score = 46.6 bits (109), Expect = 2e-05
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 QQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQ-GPTVE 177
Q A KD++++ KELEKVCNPI+TK+YQ GPT+E
Sbjct: 592 QTAEKDQYEHKQKELEKVCNPIITKLYQAGGGMPGGMPGGMPGGMPGSGSKASSGGPTIE 651
Query: 178 EVD 186
EVD
Sbjct: 652 EVD 654
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,759,071
Number of Sequences: 369166
Number of extensions: 82354
Number of successful extensions: 391
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 68,354,980
effective HSP length: 44
effective length of database: 60,226,640
effective search space used: 1686345920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)