Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_D16
(850 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07858|CATB_HUMAN Cathepsin B precursor (Cathepsin B1) (... 358 1e-98
sp|P07688|CATB_BOVIN Cathepsin B precursor [Contains: Cathe... 357 3e-98
sp|P00787|CATB_RAT Cathepsin B precursor (Cathepsin B1) (RS... 344 2e-94
sp|P10605|CATB_MOUSE Cathepsin B precursor (Cathepsin B1) [... 344 2e-94
sp|P43233|CATB_CHICK Cathepsin B precursor (Cathepsin B1) [... 333 5e-91
sp|P43157|CYSP_SCHJA Cathepsin B-like cysteine proteinase p... 317 3e-86
sp|P25792|CYSP_SCHMA Cathepsin B-like cysteine proteinase p... 310 3e-84
sp|P43510|CPR6_CAEEL Cathepsin B-like cysteine proteinase 6... 287 2e-77
sp|P43509|CPR5_CAEEL Cathepsin B-like cysteine proteinase 5... 285 1e-76
sp|P25807|CPR1_CAEEL Gut-specific cysteine proteinase precu... 281 2e-75
>sp|P07858|CATB_HUMAN Cathepsin B precursor (Cathepsin B1) (APP secretase) (APPS)
[Contains: Cathepsin B light chain; Cathepsin B heavy
chain]
Length = 339
Score = 358 bits (918), Expect = 1e-98
Identities = 164/265 (61%), Positives = 192/265 (72%)
Frame = +2
Query: 35 KLPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSN 214
K P+R ++LP +FDAR QWP+C +I EIRDQ +CGSCWAFGAVEAI+DR CIH+N
Sbjct: 67 KPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTN 126
Query: 215 GTQTPRISAEDLLTXXXXXXXXXXXXXSPSRAWRFWNTHGLVTGGEYGEHLGCQDYAFPK 394
+ +SAEDLLT P+ AW FW GLV+GG Y H+GC+ Y+ P
Sbjct: 127 AHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPP 186
Query: 395 CSHHVIGPYPNCTGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTN 574
C HHV G P CTGE TPKC K C+ GYS TY +DK YG +SYSV ++++ IM EI N
Sbjct: 187 CEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKN 246
Query: 575 GPVEAAFSVYADFPNYKSGVYQHVTGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGD 754
GPVE AFSVY+DF YKSGVYQHVTG M+GGHAI+ILGWGVEN TPYWLVANSWN WGD
Sbjct: 247 GPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGD 306
Query: 755 NGYFKILRGSDECGIEDGVVAGIPK 829
NG+FKILRG D CGIE VVAGIP+
Sbjct: 307 NGFFKILRGQDHCGIESEVVAGIPR 331
>sp|P07688|CATB_BOVIN Cathepsin B precursor [Contains: Cathepsin B light chain; Cathepsin
B heavy chain]
Length = 335
Score = 357 bits (915), Expect = 3e-98
Identities = 164/264 (62%), Positives = 189/264 (71%)
Frame = +2
Query: 35 KLPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSN 214
KLP+R V LP +FDAR QWP C +I EIRDQ +CGSCWAFGAVEAI+DR CIHSN
Sbjct: 67 KLPQRDAFAADVVLPESFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHSN 126
Query: 215 GTQTPRISAEDLLTXXXXXXXXXXXXXSPSRAWRFWNTHGLVTGGEYGEHLGCQDYAFPK 394
G +SAED+LT PS AW FW GLV+GG Y H+GC+ Y+ P
Sbjct: 127 GRVNVEVSAEDMLTCCGGECGDGCNGGFPSGAWNFWTKKGLVSGGLYNSHVGCRPYSIPP 186
Query: 395 CSHHVIGPYPNCTGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTN 574
C HHV G P CTGE TPKC K C+ GYS +Y EDK +G SSYSV +N++ IM EI N
Sbjct: 187 CEHHVNGSRPPCTGEGDTPKCNKTCEPGYSPSYKEDKHFGCSSYSVANNEKEIMAEIYKN 246
Query: 575 GPVEAAFSVYADFPNYKSGVYQHVTGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGD 754
GPVE AFSVY+DF YKSGVYQHV+G ++GGHAI+ILGWGVEN TPYWLV NSWN WGD
Sbjct: 247 GPVEGAFSVYSDFLLYKSGVYQHVSGEIMGGHAIRILGWGVENGTPYWLVGNSWNTDWGD 306
Query: 755 NGYFKILRGSDECGIEDGVVAGIP 826
NG+FKILRG D CGIE +VAG+P
Sbjct: 307 NGFFKILRGQDHCGIESEIVAGMP 330
>sp|P00787|CATB_RAT Cathepsin B precursor (Cathepsin B1) (RSG-2) [Contains: Cathepsin B
light chain; Cathepsin B heavy chain]
Length = 339
Score = 344 bits (883), Expect = 2e-94
Identities = 157/273 (57%), Positives = 188/273 (68%)
Frame = +2
Query: 11 VIKDPNNFKLPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAIT 190
V+ PN LP+R + LP +FDAR QW C +I +IRDQ +CGSCWAFGAVEA++
Sbjct: 62 VLGGPN---LPERVGFSEDINLPESFDAREQWSNCPTIAQIRDQGSCGSCWAFGAVEAMS 118
Query: 191 DRYCIHSNGTQTPRISAEDLLTXXXXXXXXXXXXXSPSRAWRFWNTHGLVTGGEYGEHLG 370
DR CIH+NG +SAEDLLT PS AW FW GLV+GG Y H+G
Sbjct: 119 DRICIHTNGRVNVEVSAEDLLTCCGIQCGDGCNGGYPSGAWNFWTRKGLVSGGVYNSHIG 178
Query: 371 CQDYAFPKCSHHVIGPYPNCTGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQA 550
C Y P C HHV G P CTGE TPKC K C+AGYS +Y EDK YG +SYSV +++
Sbjct: 179 CLPYTIPPCEHHVNGSRPPCTGEGDTPKCNKMCEAGYSTSYKEDKHYGYTSYSVSDSEKE 238
Query: 551 IMQEILTNGPVEAAFSVYADFPNYKSGVYQHVTGGMLGGHAIKILGWGVENNTPYWLVAN 730
IM EI NGPVE AF+V++DF YKSGVY+H G ++GGHAI+ILGWG+EN PYWLVAN
Sbjct: 239 IMAEIYKNGPVEGAFTVFSDFLTYKSGVYKHEAGDVMGGHAIRILGWGIENGVPYWLVAN 298
Query: 731 SWNPTWGDNGYFKILRGSDECGIEDGVVAGIPK 829
SWN WGDNG+FKILRG + CGIE +VAGIP+
Sbjct: 299 SWNVDWGDNGFFKILRGENHCGIESEIVAGIPR 331
>sp|P10605|CATB_MOUSE Cathepsin B precursor (Cathepsin B1) [Contains: Cathepsin B light
chain; Cathepsin B heavy chain]
Length = 339
Score = 344 bits (882), Expect = 2e-94
Identities = 157/265 (59%), Positives = 185/265 (69%)
Frame = +2
Query: 35 KLPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSN 214
KLP R + LP TFDAR QW C +IG+IRDQ +CGSCWAFGAVEAI+DR CIH+N
Sbjct: 67 KLPGRVAFGEDIDLPETFDAREQWSNCPTIGQIRDQGSCGSCWAFGAVEAISDRTCIHTN 126
Query: 215 GTQTPRISAEDLLTXXXXXXXXXXXXXSPSRAWRFWNTHGLVTGGEYGEHLGCQDYAFPK 394
G +SAEDLLT PS AW FW GLV+GG Y H+GC Y P
Sbjct: 127 GRVNVEVSAEDLLTCCGIQCGDGCNGGYPSGAWSFWTKKGLVSGGVYNSHVGCLPYTIPP 186
Query: 395 CSHHVIGPYPNCTGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTN 574
C HHV G P CTGE TP+C K+C+AGYS +Y EDK +G +SYSV ++ + IM EI N
Sbjct: 187 CEHHVNGSRPPCTGEGDTPRCNKSCEAGYSPSYKEDKHFGYTSYSVSNSVKEIMAEIYKN 246
Query: 575 GPVEAAFSVYADFPNYKSGVYQHVTGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGD 754
GPVE AF+V++DF YKSGVY+H G M+GGHAI+ILGWGVEN PYWL ANSWN WGD
Sbjct: 247 GPVEGAFTVFSDFLTYKSGVYKHEAGDMMGGHAIRILGWGVENGVPYWLAANSWNLDWGD 306
Query: 755 NGYFKILRGSDECGIEDGVVAGIPK 829
NG+FKILRG + CGIE +VAGIP+
Sbjct: 307 NGFFKILRGENHCGIESEIVAGIPR 331
>sp|P43233|CATB_CHICK Cathepsin B precursor (Cathepsin B1) [Contains: Cathepsin B light
chain; Cathepsin B heavy chain]
Length = 340
Score = 333 bits (853), Expect = 5e-91
Identities = 152/267 (56%), Positives = 182/267 (68%), Gaps = 1/267 (0%)
Frame = +2
Query: 35 KLPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSN 214
K P+R + LP TFD R QWP C +I EIRDQ +CGSCWAFGAVEAI+DR C+H+N
Sbjct: 67 KAPERVDFAEDMDLPDTFDTRKQWPNCPTISEIRDQGSCGSCWAFGAVEAISDRICVHTN 126
Query: 215 GTQTPRISAEDLLTXXXXXXXXXXXXXSPSRAWRFWNTHGLVTGGEYGEHLGCQDYAFPK 394
+ +SAEDLL+ PS AWR+W GLV+GG Y H+GC+ Y P
Sbjct: 127 AKVSVEVSAEDLLSCCGFECGMGCNGGYPSGAWRYWTERGLVSGGLYDSHVGCRAYTIPP 186
Query: 395 CSHHVIGPYPNCTGEF-PTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILT 571
C HHV G P CTGE TP+C + C+ GYS +Y EDK YG +SY V +++ IM EI
Sbjct: 187 CEHHVNGSRPPCTGEGGETPRCSRHCEPGYSPSYKEDKHYGITSYGVPRSEKEIMAEIYK 246
Query: 572 NGPVEAAFSVYADFPNYKSGVYQHVTGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWG 751
NGPVE AF VY DF YKSGVYQHV+G +GGHAI+ILGWGVEN TPYWL ANSWN WG
Sbjct: 247 NGPVEGAFIVYEDFLMYKSGVYQHVSGEQVGGHAIRILGWGVENGTPYWLAANSWNTDWG 306
Query: 752 DNGYFKILRGSDECGIEDGVVAGIPKL 832
G+FKILRG D CGIE +VAG+P++
Sbjct: 307 ITGFFKILRGEDHCGIESEIVAGVPRM 333
>sp|P43157|CYSP_SCHJA Cathepsin B-like cysteine proteinase precursor (Antigen Sj31)
Length = 342
Score = 317 bits (811), Expect = 3e-86
Identities = 147/281 (52%), Positives = 188/281 (66%), Gaps = 5/281 (1%)
Frame = +2
Query: 2 VLGVIKDPNNFKLPKRKPLLNR----VRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAF 169
++G K+ K R+P ++ V +P+ FD+R +WP CKSI +IRDQS CGSCWAF
Sbjct: 63 LMGARKEDAEMKR-NRRPTVDHHDLNVEIPSQFDSRKKWPHCKSISQIRDQSRCGSCWAF 121
Query: 170 GAVEAITDRYCIHSNGTQTPRISAEDLLTXXXXXXXXXXXXXSPSRAWRFWNTHGLVTGG 349
GAVEA+TDR CI S G Q+ +SA DL++ P AW +W G+VTGG
Sbjct: 122 GAVEAMTDRICIQSGGGQSAELSALDLISCCKDCGDGCQGGF-PGVAWDYWVKRGIVTGG 180
Query: 350 EYGEHLGCQDYAFPKCSHHVIGPYPNC-TGEFPTPKCKKACQAGYSKTYAEDKQYGKSSY 526
H GCQ Y FPKC HH G YP C T + TP+CK+ CQ GY Y +DK YG SY
Sbjct: 181 SKENHTGCQPYPFPKCEHHTKGKYPACGTKIYKTPQCKQTCQKGYKTPYEQDKHYGDESY 240
Query: 527 SVDSNQQAIMQEILTNGPVEAAFSVYADFPNYKSGVYQHVTGGMLGGHAIKILGWGVENN 706
+V +N++ I ++I+ GPVEAAF VY DF NYKSG+Y+HVTG ++GGHAI+I+GWGVE
Sbjct: 241 NVQNNEKVIQRDIMMYGPVEAAFDVYEDFLNYKSGIYRHVTGSIVGGHAIRIIGWGVEKR 300
Query: 707 TPYWLVANSWNPTWGDNGYFKILRGSDECGIEDGVVAGIPK 829
TPYWL+ANSWN WG+ G F+++RG DEC IE VVAG+ K
Sbjct: 301 TPYWLIANSWNEDWGEKGLFRMVRGRDECSIESDVVAGLIK 341
>sp|P25792|CYSP_SCHMA Cathepsin B-like cysteine proteinase precursor (Antigen Sm31)
Length = 340
Score = 310 bits (794), Expect = 3e-84
Identities = 142/264 (53%), Positives = 180/264 (68%), Gaps = 5/264 (1%)
Frame = +2
Query: 44 KRKPLLNR----VRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHS 211
KR+P ++ V +P+ FD+R +WP CKSI IRDQS CGSCW+FGAVEA++DR CI S
Sbjct: 75 KRRPTVDHNDWNVEIPSNFDSRKKWPGCKSIATIRDQSRCGSCWSFGAVEAMSDRSCIQS 134
Query: 212 NGTQTPRISAEDLLTXXXXXXXXXXXXXSPSRAWRFWNTHGLVTGGEYGEHLGCQDYAFP 391
G Q +SA DLLT AW +W G+VT H GC+ Y FP
Sbjct: 135 GGKQNVELSAVDLLTCCESCGLGCEGGIL-GPAWDYWVKEGIVTASSKENHTGCEPYPFP 193
Query: 392 KCSHHVIGPYPNCTGE-FPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEIL 568
KC HH G YP C + + TP+CK+ CQ Y Y +DK GKSSY+V ++++AI +EI+
Sbjct: 194 KCEHHTKGKYPPCGSKIYNTPRCKQTCQRKYKTPYTQDKHRGKSSYNVKNDEKAIQKEIM 253
Query: 569 TNGPVEAAFSVYADFPNYKSGVYQHVTGGMLGGHAIKILGWGVENNTPYWLVANSWNPTW 748
GPVEA+F+VY DF NYKSG+Y+H+TG LGGHAI+I+GWGVEN TPYWL+ANSWN W
Sbjct: 254 KYGPVEASFTVYEDFLNYKSGIYKHITGEALGGHAIRIIGWGVENKTPYWLIANSWNEDW 313
Query: 749 GDNGYFKILRGSDECGIEDGVVAG 820
G+NGYF+I+RG DEC IE V+AG
Sbjct: 314 GENGYFRIVRGRDECSIESEVIAG 337
>sp|P43510|CPR6_CAEEL Cathepsin B-like cysteine proteinase 6 precursor (Cysteine
protease-related 6)
Length = 379
Score = 287 bits (735), Expect = 2e-77
Identities = 135/258 (52%), Positives = 175/258 (67%), Gaps = 5/258 (1%)
Frame = +2
Query: 74 LPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSNGTQTPRISAEDLL 253
+P +FD+R WPKC SI IRDQS+CGSCWAFGAVEA++DR CI S+G +SA+DLL
Sbjct: 105 IPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDLL 164
Query: 254 TXXXXXXXXXXXXXSPSRAWRFWNTHGLVTGGEYGEHLGCQDYAFPKCSHHV----IGPY 421
+ P AWR+W G+VTG Y + GC+ Y FP C HH P
Sbjct: 165 SCCKSCGFGCNGG-DPLAAWRYWVKDGIVTGSNYTANNGCKPYPFPPCEHHSKKTHFDPC 223
Query: 422 PNCTGEFPTPKCKKACQAGYS-KTYAEDKQYGKSSYSVDSNQQAIMQEILTNGPVEAAFS 598
P+ +PTPKC+K C + Y+ KTY+EDK +G S+Y V + +AI +E++T+GP+E AF
Sbjct: 224 PHDL--YPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFE 281
Query: 599 VYADFPNYKSGVYQHVTGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGDNGYFKILR 778
VY DF NY GVY H G + GGHA+K++GWG+++ PYW VANSWN WG++G+F+ILR
Sbjct: 282 VYEDFLNYDGGVYVHTGGKLGGGHAVKLIGWGIDDGIPYWTVANSWNTDWGEDGFFRILR 341
Query: 779 GSDECGIEDGVVAGIPKL 832
G DECGIE GVV GIPKL
Sbjct: 342 GVDECGIESGVVGGIPKL 359
>sp|P43509|CPR5_CAEEL Cathepsin B-like cysteine proteinase 5 precursor (Cysteine
protease-related 5)
Length = 344
Score = 285 bits (729), Expect = 1e-76
Identities = 137/263 (52%), Positives = 168/263 (63%), Gaps = 6/263 (2%)
Frame = +2
Query: 74 LPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSNGTQTPRISAEDLL 253
+P FDAR QWP C SI IRDQS+CGSCWAF A EAI+DR CI SNG +S+EDLL
Sbjct: 82 IPDHFDARDQWPNCMSINNIRDQSDCGSCWAFAAAEAISDRTCIASNGAVNTLLSSEDLL 141
Query: 254 TXXXXXXXXXXXXXS--PSRAWRFWNTHGLVTGGEYGEHLGCQDYAFPKCSHHVIG-PYP 424
+ P +AW++W HGLVTGG Y GC+ Y+ C V G +P
Sbjct: 142 SCCTGMFSCGNGCEGGYPIQAWKWWVKHGLVTGGSYETQFGCKPYSIAPCGETVNGVKWP 201
Query: 425 NCTGEF-PTPKCKKACQA--GYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTNGPVEAAF 595
C + PTPKC +C + Y+ Y +DK +G ++Y+V + I EILTNGP+E AF
Sbjct: 202 ACPEDTEPTPKCVDSCTSKNNYATPYLQDKHFGSTAYAVGKKVEQIQTEILTNGPIEVAF 261
Query: 596 SVYADFPNYKSGVYQHVTGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGDNGYFKIL 775
+VY DF Y +GVY H G LGGHA+KILGWGV+N TPYWLVANSWN WG+ GYF+I+
Sbjct: 262 TVYEDFYQYTTGVYVHTAGASLGGHAVKILGWGVDNGTPYWLVANSWNVAWGEKGYFRII 321
Query: 776 RGSDECGIEDGVVAGIPKL*MRN 844
RG +ECGIE VAGIP L N
Sbjct: 322 RGLNECGIEHSAVAGIPDLARHN 344
>sp|P25807|CPR1_CAEEL Gut-specific cysteine proteinase precursor
Length = 329
Score = 281 bits (719), Expect = 2e-75
Identities = 135/253 (53%), Positives = 167/253 (66%)
Frame = +2
Query: 74 LPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSNGTQTPRISAEDLL 253
+P TFD+R QW +CKSI IRDQ+ CGSCWAFGA E I+DR CI + G Q P IS +DLL
Sbjct: 85 VPATFDSRTQWSECKSIKLIRDQATCGSCWAFGAAEMISDRTCIETKGAQQPIISPDDLL 144
Query: 254 TXXXXXXXXXXXXXSPSRAWRFWNTHGLVTGGEYGEHLGCQDYAFPKCSHHVIGPYPNCT 433
+ P +A R+W++ G+VTGG+Y GC+ Y C+ NC
Sbjct: 145 SCCGSSCGNGCEGGYPIQALRWWDSKGVVTGGDY-HGAGCKPYPIAPCTSG------NCP 197
Query: 434 GEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTNGPVEAAFSVYADF 613
E TP C +CQ+GYS YA+DK +G S+Y+V N +I EI NGPVEAAFSVY DF
Sbjct: 198 -ESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSVYEDF 256
Query: 614 PNYKSGVYQHVTGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGDNGYFKILRGSDEC 793
YKSGVY+H G LGGHAIKI+GWG E+ +PYWLVANSW WG++G+FKI RG D+C
Sbjct: 257 YKYKSGVYKHTAGKYLGGHAIKIIGWGTESGSPYWLVANSWGVNWGESGFFKIYRGDDQC 316
Query: 794 GIEDGVVAGIPKL 832
GIE VVAG K+
Sbjct: 317 GIESAVVAGKAKV 329
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,682,172
Number of Sequences: 369166
Number of extensions: 2441076
Number of successful extensions: 7107
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7003
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8341863645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)