Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_D04
(405 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9CWG1|GLIP1_MOUSE Glioma pathogenesis-related protein 1... 82 3e-16
sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1... 80 2e-15
sp|P35782|VA52_VESCR Venom allergen 5.02 (Antigen 5-2) (Ag5... 80 2e-15
sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 pre... 80 2e-15
sp|P35760|VA5_VESMC Venom allergen 5 (Antigen 5) (Ag5) (All... 79 3e-15
sp|P81657|VA5_VESMA Venom allergen 5 (Antigen 5) (Ag5) (All... 79 3e-15
sp|Q05109|VA5_POLAN Venom allergen 5 precursor (Antigen 5) ... 78 8e-15
sp|P54108|CRIS3_HUMAN Cysteine-rich secretory protein 3 pre... 77 1e-14
sp|P35780|VA5_POLFU Venom allergen 5 (Antigen 5) (Ag5) (All... 77 1e-14
sp|Q60477|CRIS2_CAVPO Cysteine-rich secretory protein 2 pre... 77 1e-14
>sp|Q9CWG1|GLIP1_MOUSE Glioma pathogenesis-related protein 1 precursor (GliPR 1)
Length = 255
Score = 82.4 bits (202), Expect = 3e-16
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Frame = +1
Query: 4 QSKDRKFGSYDWVGQNIAYWSSN--DVTEGIQMWFDEVKGYTFNNDRCTGFTCLHYTALV 177
Q R ++ +G+NI S + V+ I W++E+K Y F+ +C C HYT +V
Sbjct: 82 QLHSRIHPNFTALGENIWLGSLSIFSVSSAISAWYEEIKHYDFSTRKCR-HVCGHYTQVV 140
Query: 178 WAKTKEFGCGIADCSRQNLGKIFLICNYGPGGNWNNEKPYETGSACSKCPSGTRCNNSLC 357
WA + + GC + C G F IC+YGP GN+ PY+ G+ CS CP +C NSLC
Sbjct: 141 WADSYKLGCAVQLCPN---GANF-ICDYGPAGNYPTW-PYKQGATCSDCPKDDKCLNSLC 195
>sp|P48060|GLIP1_HUMAN Glioma pathogenesis-related protein 1 precursor (GliPR 1) (RTVP-1
protein)
Length = 266
Score = 80.1 bits (196), Expect = 2e-15
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Frame = +1
Query: 40 VGQNIAYWSSN----DVTEGIQMWFDEVKGYTFNNDRCTGFTCLHYTALVWAKTKEFGCG 207
+G+NI W+ + V+ I W+DE++ Y F C C HYT +VWA + + GC
Sbjct: 96 LGENI--WTGSVPIFSVSSAITNWYDEIQDYDFKTRICKK-VCGHYTQVVWADSYKVGCA 152
Query: 208 IADCSRQN-----LGKIFLICNYGPGGNWNNEKPYETGSACSKCPSGTRCNNSLC 357
+ C + + ICNYGPGGN+ PY+ G+ CS CP+ +C ++LC
Sbjct: 153 VQFCPKVSGFDALSNGAHFICNYGPGGNYPTW-PYKRGATCSACPNNDKCLDNLC 206
>sp|P35782|VA52_VESCR Venom allergen 5.02 (Antigen 5-2) (Ag5-2) (Allergen Vesp c 5.02)
(Vesp c V.02)
Length = 202
Score = 80.1 bits (196), Expect = 2e-15
Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Frame = +1
Query: 40 VGQNIAYWSSN-----DVTEGIQMWFDEVKGYTFNNDRCTGFTCLHYTALVWAKTKEFGC 204
VGQNIA S++ +V+ ++MW DEVK Y + + + HYT +VWAKTKE GC
Sbjct: 109 VGQNIAEGSTSADNFVNVSNMVKMWEDEVKDYQYGSPKNKLNKVGHYTQMVWAKTKEIGC 168
Query: 205 GIADCSRQNLGKIFLICNYGPGGNWNNEKPYE 300
G D + +L+CNYGP GN NE YE
Sbjct: 169 GSEDYIEDGWHRHYLVCNYGPAGNVGNEPIYE 200
>sp|O19010|CRIS3_HORSE Cysteine-rich secretory protein 3 precursor (CRISP-3)
Length = 245
Score = 79.7 bits (195), Expect = 2e-15
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Frame = +1
Query: 4 QSKDRKFGSYDWVGQNIAYWS-SNDVTEGIQMWFDEVKGYTFN-NDRCTGFTCLHYTALV 177
+++DR G+ G+N+ S N ++ IQ W DEV + + + HYT +V
Sbjct: 85 KAEDRAVGTMK-CGENLFMSSIPNSWSDAIQNWHDEVHDFKYGVGPKTPNAVVGHYTQVV 143
Query: 178 WAKTKEFGCGIADCSRQNLGKIFLICNYGPGGNWNNE--KPYETGSACSKCPSGTRCNNS 351
W + GCGIA C +Q K + +C Y P GN+ N+ PYE G+ C++CP C+N
Sbjct: 144 WYSSYRVGCGIAYCPKQGTLKYYYVCQYCPAGNYVNKINTPYEQGTPCARCPG--NCDNG 201
Query: 352 LCS 360
LC+
Sbjct: 202 LCT 204
>sp|P35760|VA5_VESMC Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves m 5) (Ves m V)
Length = 204
Score = 79.0 bits (193), Expect = 3e-15
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 11/99 (11%)
Frame = +1
Query: 40 VGQNIAYWSS-----NDVTEGIQMWFDEVKGY------TFNNDRCTGFTCLHYTALVWAK 186
VGQN+A S ND + ++MW DEVK Y + NN G HYT +VWA
Sbjct: 109 VGQNVALTGSTAAVYNDPVKLVKMWEDEVKDYNPKKKFSENNFLKIG----HYTQMVWAN 164
Query: 187 TKEFGCGIADCSRQNLGKIFLICNYGPGGNWNNEKPYET 303
TKE GCG ++N K +L+CNYGP GN+ NE+ Y+T
Sbjct: 165 TKEVGCGSIKYIQENWHKHYLVCNYGPSGNFQNEELYQT 203
>sp|P81657|VA5_VESMA Venom allergen 5 (Antigen 5) (Ag5) (Allergen Vesp m 5)
Length = 202
Score = 79.0 bits (193), Expect = 3e-15
Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +1
Query: 40 VGQNIAYWSSN-----DVTEGIQMWFDEVKGYTFNNDRCTGFTCLHYTALVWAKTKEFGC 204
VGQNIA S V+ +QMW DEVK Y + + + HYT +VWAKTKE GC
Sbjct: 109 VGQNIAENGSTAASFASVSNMVQMWADEVKNYQYGSTKNKLIEVGHYTQMVWAKTKEIGC 168
Query: 205 GIADCSRQNLGKIFLICNYGPGGNWNNEKPYE 300
G + +L+CNYGP GN NE YE
Sbjct: 169 GSIKYIENGWHRHYLVCNYGPAGNIGNEPIYE 200
>sp|Q05109|VA5_POLAN Venom allergen 5 precursor (Antigen 5) (Ag5) (Allergen Pol a 5)
(Pol a V)
Length = 209
Score = 77.8 bits (190), Expect = 8e-15
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Frame = +1
Query: 40 VGQNIAYWSSN---DVTEGIQMWFDEVKGYTFNNDRCTGFTCL------HYTALVWAKTK 192
VGQNIAY + DV I++W +EVK + +N TG T HYT +VW KTK
Sbjct: 116 VGQNIAYAGGSNLPDVVSLIKLWENEVKDFNYN----TGITKQNFAKIGHYTQMVWGKTK 171
Query: 193 EFGCGIADCSRQNLGKIFLICNYGPGGNWNNEKPY 297
E GCG N+ +LICNYGP GN+ + PY
Sbjct: 172 EIGCGSLKYMENNMQNHYLICNYGPAGNYLGQLPY 206
>sp|P54108|CRIS3_HUMAN Cysteine-rich secretory protein 3 precursor (CRISP-3) (SGP28
protein)
Length = 245
Score = 77.4 bits (189), Expect = 1e-14
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Frame = +1
Query: 43 GQNIAYWS-SNDVTEGIQMWFDEVKGYTFN-NDRCTGFTCLHYTALVWAKTKEFGCGIAD 216
G+N+ S S+ ++ IQ WFDE + F + HYT +VW + GCG A
Sbjct: 97 GENLYMSSASSSWSQAIQSWFDEYNDFDFGVGPKTPNAVVGHYTQVVWYSSYLVGCGNAY 156
Query: 217 CSRQNLGKIFLICNYGPGGNWNNE--KPYETGSACSKCPSGTRCNNSLCS 360
C Q + K + +C Y P GNW N PYE G+ C+ CP C++ LC+
Sbjct: 157 CPNQKVLKYYYVCQYCPAGNWANRLYVPYEQGAPCASCPD--NCDDGLCT 204
>sp|P35780|VA5_POLFU Venom allergen 5 (Antigen 5) (Ag5) (Allergen Pol f 5) (Pol f V)
Length = 205
Score = 77.4 bits (189), Expect = 1e-14
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Frame = +1
Query: 40 VGQNIAYWSSN---DVTEGIQMWFDEVKGYTFNNDRCTGFTCL------HYTALVWAKTK 192
VGQNIAY + DV I++W +EVK + +N G T HYT ++WAKTK
Sbjct: 112 VGQNIAYAGGSKLPDVVSLIKLWENEVKDFNYNK----GITKQNFGKVGHYTQMIWAKTK 167
Query: 193 EFGCGIADCSRQNLGKIFLICNYGPGGNWNNEKPY 297
E GCG + N+ +LICNYGP GN+ + PY
Sbjct: 168 EIGCGSLKYMKNNMQHHYLICNYGPAGNYLGQLPY 202
>sp|Q60477|CRIS2_CAVPO Cysteine-rich secretory protein 2 precursor (CRISP-2)
(Testis-specific protein TPX-1) (Autoantigen 1) (25 kDa
acrosomal autoantigen) (AA1)
Length = 244
Score = 77.4 bits (189), Expect = 1e-14
Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Frame = +1
Query: 1 DQSKDRKFGSYDWVGQNIAYWSSNDVTEGIQMWFDEVKGYTFN-NDRCTGFTCLHYTALV 177
D+ K G ++ + + WS + IQ WFDE + +TF + HYT LV
Sbjct: 88 DRKTSTKCGENLYMSSDPSSWS-----DAIQSWFDESQDFTFGVGPKSHNAVVGHYTQLV 142
Query: 178 WAKTKEFGCGIADCSRQNLGKIFLICNYGPGGN--WNNEKPYETGSACSKCPSGTRCNNS 351
W + GCGIA C Q+ K + +C Y P GN + PY+ G C+ CP C N
Sbjct: 143 WYSSYLVGCGIAYCPNQDSLKYYYVCQYCPAGNNVYTKNTPYKQGIPCASCPG--HCENG 200
Query: 352 LCS 360
LC+
Sbjct: 201 LCT 203
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,656,112
Number of Sequences: 369166
Number of extensions: 1002460
Number of successful extensions: 2526
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2439
length of database: 68,354,980
effective HSP length: 98
effective length of database: 50,250,950
effective search space used: 1809034200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)